Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1138
         (299 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical ...   128   6e-31
Z66524-1|CAA91420.2|  500|Caenorhabditis elegans Hypothetical pr...    30   0.27 
AL132904-13|CAC35846.4|  778|Caenorhabditis elegans Hypothetical...    30   0.35 
AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical ...    28   1.1  
AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical ...    27   1.9  
AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical ...    27   1.9  
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr...    27   3.3  
U49941-1|AAB53872.1|  609|Caenorhabditis elegans Hypothetical pr...    26   5.8  
AL032639-10|CAA21634.1|  108|Caenorhabditis elegans Hypothetical...    26   5.8  
AY594354-1|AAT01444.1|  539|Caenorhabditis elegans cofactor-inde...    25   7.6  
AF039713-12|AAO12419.1|  521|Caenorhabditis elegans Hypothetical...    25   7.6  
AF039713-11|AAB96720.1|  539|Caenorhabditis elegans Hypothetical...    25   7.6  

>AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical
           protein Y48B6A.2 protein.
          Length = 91

 Score =  128 bits (310), Expect = 6e-31
 Identities = 54/76 (71%), Positives = 63/76 (82%)
 Frame = +2

Query: 26  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGXWSCKRC 205
           MAKRTKKVGI GKYGTRYGASLRKM KK+EV QH++YTCSFCGK+AMKR   G W+C +C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKC 60

Query: 206 KRTVAGGAWVFSTTAA 253
            + VAGGA+V+ T  A
Sbjct: 61  HKVVAGGAYVYGTVTA 76


>Z66524-1|CAA91420.2|  500|Caenorhabditis elegans Hypothetical
           protein T13H5.4 protein.
          Length = 500

 Score = 30.3 bits (65), Expect = 0.27
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +1

Query: 4   CIGEVYQNGQTYQKGWNYWQIWHTLRCLST*NGQKDGSNPTRKVYLLILW 153
           C  + Y+  + +QK +N W+  H +RCL   N     +N T+    L LW
Sbjct: 410 CGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPN-TSHFANITKIKDALDLW 458


>AL132904-13|CAC35846.4|  778|Caenorhabditis elegans Hypothetical
           protein Y111B2A.17 protein.
          Length = 778

 Score = 29.9 bits (64), Expect = 0.35
 Identities = 22/77 (28%), Positives = 29/77 (37%)
 Frame = +2

Query: 32  KRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGXWSCKRCKR 211
           KR K   I        G   R ++ K+   +H +Y     G D    S  G   C    R
Sbjct: 67  KRLKSSEIVADEFVTGGVDSRVVLWKLR-GEHVEYVADLTGCDGSVGSVCG---CVEDGR 122

Query: 212 TVAGGAWVFSTTAAYHA 262
            V   AWV  T+  +HA
Sbjct: 123 KVVAAAWVSETSNGFHA 139


>AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical
           protein C15F1.5a protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +2

Query: 89  LRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGXWSCKRCKRTVAGGAWVFSTTAAYHADL 268
           L+K  KKM V   A    S    + M  +C G    + C+R + G A +  T  A H D+
Sbjct: 32  LKKSTKKMRVCPVAHCYSSLTAPEPMTSTCEG----ENCQRKIMGNAEILRT--ACHHDI 85

Query: 269 LSGGY 283
               Y
Sbjct: 86  CQHCY 90


>AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical
           protein F16B4.2a protein.
          Length = 362

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 167 KRSCVGXWSCKRCKRTVAGGAWVFSTT 247
           K  C+  W+C  C +T+   +W F +T
Sbjct: 333 KEKCILDWTCSTCDKTIE--SWYFRST 357


>AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical
           protein F16B4.2b protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 167 KRSCVGXWSCKRCKRTVAGGAWVFSTT 247
           K  C+  W+C  C +T+   +W F +T
Sbjct: 338 KEKCILDWTCSTCDKTIE--SWYFRST 362


>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
           protein C16A3.7 protein.
          Length = 1119

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 122 QHAKYTCSFCGKDAMKRSCVGXWSCKRC 205
           ++ KY C+ C      R   G WSCK C
Sbjct: 229 ENNKYECAICYTRITTRQ--GVWSCKTC 254


>U49941-1|AAB53872.1|  609|Caenorhabditis elegans Hypothetical
           protein K10B3.5 protein.
          Length = 609

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 13/60 (21%), Positives = 25/60 (41%)
 Frame = +2

Query: 98  MVKKMEVTQHAKYTCSFCGKDAMKRSCVGXWSCKRCKRTVAGGAWVFSTTAAYHADLLSG 277
           ++ K  VT+H K T             +  +  K  +R ++G  W F ++    +  L+G
Sbjct: 365 LINKHLVTEHRKETVPLLDNAIFGNGALSDYGKKSSQRRISGMIWSFVSSHLAQSGKLTG 424


>AL032639-10|CAA21634.1|  108|Caenorhabditis elegans Hypothetical
           protein Y38F1A.9 protein.
          Length = 108

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 68  GTRYGASLRKMVKKMEVTQHAK 133
           G RY + ++KMV K  VT H K
Sbjct: 46  GDRYVSKIKKMVGKFTVTLHIK 67


>AY594354-1|AAT01444.1|  539|Caenorhabditis elegans
           cofactor-independent phosphoglyceratemutase protein.
          Length = 539

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 13/59 (22%), Positives = 26/59 (44%)
 Frame = +2

Query: 95  KMVKKMEVTQHAKYTCSFCGKDAMKRSCVGXWSCKRCKRTVAGGAWVFSTTAAYHADLL 271
           KM++++E   H    C+F   D +  + V   + K C+ T      ++  T  +   L+
Sbjct: 405 KMIEQLEAGTHPFIMCNFAPPDMVGHTGVYEAAVKACEATDIAIGRIYEATQKHGYSLM 463


>AF039713-12|AAO12419.1|  521|Caenorhabditis elegans Hypothetical
           protein F57B10.3b protein.
          Length = 521

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 13/59 (22%), Positives = 26/59 (44%)
 Frame = +2

Query: 95  KMVKKMEVTQHAKYTCSFCGKDAMKRSCVGXWSCKRCKRTVAGGAWVFSTTAAYHADLL 271
           KM++++E   H    C+F   D +  + V   + K C+ T      ++  T  +   L+
Sbjct: 387 KMIEQLEAGTHPFIMCNFAPPDMVGHTGVYEAAVKACEATDIAIGRIYEATQKHGYSLM 445


>AF039713-11|AAB96720.1|  539|Caenorhabditis elegans Hypothetical
           protein F57B10.3a protein.
          Length = 539

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 13/59 (22%), Positives = 26/59 (44%)
 Frame = +2

Query: 95  KMVKKMEVTQHAKYTCSFCGKDAMKRSCVGXWSCKRCKRTVAGGAWVFSTTAAYHADLL 271
           KM++++E   H    C+F   D +  + V   + K C+ T      ++  T  +   L+
Sbjct: 405 KMIEQLEAGTHPFIMCNFAPPDMVGHTGVYEAAVKACEATDIAIGRIYEATQKHGYSLM 463


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,303,733
Number of Sequences: 27780
Number of extensions: 145610
Number of successful extensions: 420
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)