Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1137
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical p...    27   8.7  

>Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical protein
            F26H9.8 protein.
          Length = 1377

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
 Frame = +3

Query: 294  ADEIKDLTLNYFPFDNSVQI-IDAKKGKNV---LKRVQLPPLNLDMLQIGNIVN 443
            ADE K +T++  P +N +QI +D+  GK V   ++ +  P  + D L I +++N
Sbjct: 1023 ADEHKIVTIDSIPVENDIQIVVDSFSGKWVELSVEELTEPKESDDELSIESLLN 1076


>Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical protein
            F26H9.8 protein.
          Length = 1377

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
 Frame = +3

Query: 294  ADEIKDLTLNYFPFDNSVQI-IDAKKGKNV---LKRVQLPPLNLDMLQIGNIVN 443
            ADE K +T++  P +N +QI +D+  GK V   ++ +  P  + D L I +++N
Sbjct: 1023 ADEHKIVTIDSIPVENDIQIVVDSFSGKWVELSVEELTEPKESDDELSIESLLN 1076


>U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical
           protein C24A8.1 protein.
          Length = 582

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 279 FHTRNYIYQVVVYHCYRYQPVYV 211
           F+TR   + V+ +HC  Y P+Y+
Sbjct: 128 FNTRTSYFLVIEHHCGIYNPIYM 150


>U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical
           protein F18A1.1 protein.
          Length = 1075

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
 Frame = +3

Query: 258 KYSFLCEMYDEXADEIKDLTLNYFPFDNSVQI-IDAKKGKNVLKRVQLPPLNLDMLQIGN 434
           + S  CE+         DL     P+     + + A  GK  ++ ++ P L  ++ ++  
Sbjct: 658 RLSDFCELIKNLKYIDGDLIFENNPYLRRTSLSLRAVNGK--IRMIRTPQLCWEVQKLRK 715

Query: 435 IVNIFSKLLYIXDCAPATRETLFQKCQVLC 524
           +V  F       DCA    +TLF++ +  C
Sbjct: 716 VVQAFKMKHIYSDCANIEMDTLFEEYEEKC 745


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,625,028
Number of Sequences: 27780
Number of extensions: 255233
Number of successful extensions: 638
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)