Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1132
(548 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 142 5e-33
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 132 5e-30
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 119 5e-26
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 118 1e-25
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 118 1e-25
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 115 8e-25
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 113 2e-24
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 112 4e-24
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 112 6e-24
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 111 8e-24
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 109 5e-23
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 108 1e-22
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 107 1e-22
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 107 2e-22
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 106 3e-22
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 104 2e-21
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 103 3e-21
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 103 4e-21
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 103 4e-21
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 102 5e-21
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 97 2e-19
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 97 3e-19
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 94 2e-18
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 92 7e-18
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 91 2e-17
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 91 2e-17
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 89 6e-17
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 87 3e-16
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 87 3e-16
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 87 3e-16
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 87 3e-16
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 86 6e-16
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 85 8e-16
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 85 1e-15
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 83 3e-15
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 81 1e-14
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 81 1e-14
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 81 2e-14
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 80 4e-14
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 79 9e-14
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 79 9e-14
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 78 1e-13
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 77 2e-13
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 76 5e-13
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 75 1e-12
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 74 2e-12
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 74 3e-12
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 73 3e-12
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 71 2e-11
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 71 2e-11
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 70 3e-11
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 70 4e-11
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 69 7e-11
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 69 9e-11
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 69 9e-11
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 68 1e-10
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 68 1e-10
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 68 2e-10
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 68 2e-10
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 67 2e-10
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 66 4e-10
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 66 5e-10
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 66 7e-10
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 66 7e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 65 9e-10
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 65 1e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 64 2e-09
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 64 3e-09
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 64 3e-09
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 63 5e-09
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 62 1e-08
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 62 1e-08
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 61 1e-08
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 61 2e-08
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 61 2e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 60 3e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 60 3e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 4e-08
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 59 6e-08
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 59 6e-08
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 59 8e-08
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 59 8e-08
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 56 5e-07
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 56 5e-07
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 56 7e-07
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 55 9e-07
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 55 9e-07
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 1e-06
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 54 2e-06
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 54 2e-06
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 53 4e-06
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 52 9e-06
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 52 1e-05
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 2e-05
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 51 2e-05
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 50 3e-05
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 50 4e-05
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 48 1e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 1e-04
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 47 3e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 45 0.001
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 43 0.005
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 42 0.009
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 38 0.20
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 33 3.3
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 33 3.3
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 33 3.3
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 5.8
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 5.8
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 142 bits (344), Expect = 5e-33
Identities = 83/168 (49%), Positives = 93/168 (55%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TIIN+R+NN+SFDQ+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGG
Sbjct: 164 TIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGG 223
Query: 182 DPILYQHLF*FFGHPEVYILILPGLV*FLILFHXXXXXXXXXXXXXXFMLY*QLGY*DLL 361
DPILYQHLF FFGHP++ LV F +LF FM L Y DLL
Sbjct: 224 DPILYQHLFWFFGHPKLMFSFSQDLVSFHMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLL 283
Query: 362 FEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFLDD*LQYMELKLII 505
FE KFL D +MELKLI+
Sbjct: 284 FELIMYLPSESMLKLELVLHQQLSLLLSQLGLKFLVDWQPFMELKLIM 331
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 132 bits (319), Expect = 5e-30
Identities = 62/81 (76%), Positives = 68/81 (83%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TIIN+R+N +SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGG
Sbjct: 140 TIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGG 199
Query: 182 DPILYQHLF*FFGHPEVYILI 244
DPILYQHLF FFGHPEVYILI
Sbjct: 200 DPILYQHLFWFFGHPEVYILI 220
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 119 bits (286), Expect = 5e-26
Identities = 57/84 (67%), Positives = 65/84 (77%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI N+R ++ +LPLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGG
Sbjct: 170 TIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGG 229
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
DPILYQHLF FFGHPEVYILILPG
Sbjct: 230 DPILYQHLFWFFGHPEVYILILPG 253
Score = 86.2 bits (204), Expect = 4e-16
Identities = 45/83 (54%), Positives = 54/83 (65%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GIISHI+S GK F F+V AHH+FTVG+D+DTRAYFT+AT+I
Sbjct: 255 GIISHIVSTFSGKP-VFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI 313
Query: 436 IAVPTGIKIFR*LATIHGTQINY 504
IAVPTGIKIF +AT+ G I Y
Sbjct: 314 IAVPTGIKIFSWIATMWGGSIQY 336
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 118 bits (283), Expect = 1e-25
Identities = 56/84 (66%), Positives = 65/84 (77%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI+N+R N + D++ LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGG
Sbjct: 151 TILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGG 210
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
DPILYQHLF FFGHPEVYILILPG
Sbjct: 211 DPILYQHLFWFFGHPEVYILILPG 234
Score = 98.7 bits (235), Expect = 8e-20
Identities = 48/86 (55%), Positives = 59/86 (68%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GIISH+I E GKKETF FIV AHH+FT+G+D+DTRAYFTSAT+I
Sbjct: 236 GIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMI 295
Query: 436 IAVPTGIKIFR*LATIHGTQINYNLI 513
IA+PTGIKIF +AT G ++ NL+
Sbjct: 296 IAIPTGIKIFSWMATFSGVKLMNNLM 321
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 118 bits (283), Expect = 1e-25
Identities = 54/84 (64%), Positives = 65/84 (77%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T++N+R ++ +LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGG
Sbjct: 167 TVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGG 226
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
DPILYQHLF FFGHPEVYILI+PG
Sbjct: 227 DPILYQHLFWFFGHPEVYILIIPG 250
Score = 79.4 bits (187), Expect = 5e-14
Identities = 39/78 (50%), Positives = 52/78 (66%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G++SHI+S GK F F+V +HH++ VG+D+DTRAYFT+AT+I
Sbjct: 252 GMVSHIVSAFSGKP-VFGYLGMVYAMFSIGILGFLVWSHHMYAVGLDVDTRAYFTAATMI 310
Query: 436 IAVPTGIKIFR*LATIHG 489
IAVPTGIKIF LAT++G
Sbjct: 311 IAVPTGIKIFSWLATLYG 328
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 115 bits (276), Expect = 8e-25
Identities = 55/84 (65%), Positives = 64/84 (76%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI+N+R S ++PLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGG
Sbjct: 175 TILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGG 234
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
DPILYQHLF FFGHPEVYILILPG
Sbjct: 235 DPILYQHLFWFFGHPEVYILILPG 258
Score = 79.4 bits (187), Expect = 5e-14
Identities = 41/76 (53%), Positives = 51/76 (67%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G+ISHI+S +K F FIV AHH++TVG+D+DTRAYFT+AT+I
Sbjct: 260 GMISHIVSTF-SRKPVFGYIGMVYAMVSIGVLGFIVWAHHMYTVGLDVDTRAYFTAATMI 318
Query: 436 IAVPTGIKIFR*LATI 483
IAVPTGIKIF +ATI
Sbjct: 319 IAVPTGIKIFSWIATI 334
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 113 bits (273), Expect = 2e-24
Identities = 57/84 (67%), Positives = 62/84 (73%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T IN++ IS Q PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGG
Sbjct: 167 TTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGG 226
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
DPILYQHLF FFGHPEVYILILPG
Sbjct: 227 DPILYQHLFWFFGHPEVYILILPG 250
Score = 96.7 bits (230), Expect = 3e-19
Identities = 45/83 (54%), Positives = 57/83 (68%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GIISH+++ GKKE F FIV AHH+FTVG+D+DTRAYFTSAT+I
Sbjct: 252 GIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMI 311
Query: 436 IAVPTGIKIFR*LATIHGTQINY 504
IA+PTG+K+F LAT+HG I +
Sbjct: 312 IAIPTGVKVFSWLATLHGGAIKW 334
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 112 bits (270), Expect = 4e-24
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TIIN++ I+ Q PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGG
Sbjct: 167 TIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGG 226
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
DPILYQHLF FFGHPEVYILILPG
Sbjct: 227 DPILYQHLFWFFGHPEVYILILPG 250
Score = 95.5 bits (227), Expect = 7e-19
Identities = 44/83 (53%), Positives = 57/83 (68%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G+ISH+++ GKKE F FIV AHH+FTVG+D+DTRAYFTSAT+I
Sbjct: 252 GMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMI 311
Query: 436 IAVPTGIKIFR*LATIHGTQINY 504
IA+PTG+K+F LAT+HG I +
Sbjct: 312 IAIPTGVKVFSWLATLHGGAIKW 334
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 112 bits (269), Expect = 6e-24
Identities = 57/84 (67%), Positives = 62/84 (73%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T IN++ IS Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGG
Sbjct: 168 TAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGG 227
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
DPILYQHLF FFGHPEVYILILPG
Sbjct: 228 DPILYQHLFWFFGHPEVYILILPG 251
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 111 bits (268), Expect = 8e-24
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TIIN++ ++ Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGG
Sbjct: 167 TIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGG 226
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
DPILYQHLF FFGHPEVYILILPG
Sbjct: 227 DPILYQHLFWFFGHPEVYILILPG 250
Score = 96.7 bits (230), Expect = 3e-19
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G+ISHI++ GKKE F FIV AHH+FTVG+D+DTRAYFTSAT+I
Sbjct: 252 GMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMI 311
Query: 436 IAVPTGIKIFR*LATIHGTQINYN 507
IA+PTG+K+F LAT+HG+ + ++
Sbjct: 312 IAIPTGVKVFSWLATLHGSNMKWS 335
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 109 bits (261), Expect = 5e-23
Identities = 53/84 (63%), Positives = 61/84 (72%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G+ISHIISQE GKKE F F+V AHH+FTVG+D+DTRAYFTSAT+I
Sbjct: 165 GMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDTRAYFTSATMI 224
Query: 436 IAVPTGIKIFR*LATIHGTQINYN 507
IAVPTGIK+F LAT HGTQI Y+
Sbjct: 225 IAVPTGIKVFSWLATFHGTQILYS 248
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 108 bits (259), Expect = 1e-22
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T +N+R N +S ++PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGG
Sbjct: 168 TTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGG 227
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
DPI YQH F FFGHPEVYILI+PG
Sbjct: 228 DPIFYQHAFWFFGHPEVYILIIPG 251
Score = 81.4 bits (192), Expect = 1e-14
Identities = 42/81 (51%), Positives = 52/81 (64%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GI+SHI+S KK F F+V +HH++ VG+D DTRAYFTSAT+I
Sbjct: 253 GIVSHIVSTY-SKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMI 311
Query: 436 IAVPTGIKIFR*LATIHGTQI 498
IA+PTGIKIF LATI+G I
Sbjct: 312 IAIPTGIKIFSWLATIYGGSI 332
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 107 bits (258), Expect = 1e-22
Identities = 49/84 (58%), Positives = 62/84 (73%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T +N+R N ++ +LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGG
Sbjct: 168 TTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGG 227
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
DPILY+HLF FFGHPEVYILI+PG
Sbjct: 228 DPILYEHLFWFFGHPEVYILIIPG 251
Score = 72.5 bits (170), Expect = 6e-12
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GIISH++S KK F F+V +HH++ VG+D DTRAYFTSAT+I
Sbjct: 253 GIISHVVSTY-SKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMI 311
Query: 436 IAVPTGIKIF 465
IA+PTGIKIF
Sbjct: 312 IAIPTGIKIF 321
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 107 bits (257), Expect = 2e-22
Identities = 50/84 (59%), Positives = 62/84 (73%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI+N+R ++ ++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGG
Sbjct: 210 TILNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGG 269
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
DP LYQHLF FFGHPEVYI+ILPG
Sbjct: 270 DPELYQHLFWFFGHPEVYIMILPG 293
Score = 70.1 bits (164), Expect = 3e-11
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GIIS I+S +K F F+V AHH+FT G+ ++ + YFT+AT++
Sbjct: 295 GIISQIVSTF-SRKPVFGYLGMAYAMVAIGVVGFVVWAHHMFTTGMSVNVKMYFTAATMV 353
Query: 436 IAVPTGIKIFR*LATIHGTQINY 504
IAVPTGIKIF +ATI G I++
Sbjct: 354 IAVPTGIKIFSWIATIWGGSISF 376
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 106 bits (255), Expect = 3e-22
Identities = 48/83 (57%), Positives = 62/83 (74%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T +N+R ++ ++PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGG
Sbjct: 273 TFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGG 332
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
DPIL+QH+F FFGHPEVYI+ILP
Sbjct: 333 DPILFQHIFWFFGHPEVYIVILP 355
Score = 64.1 bits (149), Expect = 2e-09
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G+ISHI++ KK F F+V AHH++TVG+ + +AYF AT++
Sbjct: 358 GVISHIVATF-SKKPIFGYLPMVYALVAIGGLGFVVWAHHMYTVGMTLTQQAYFMVATMV 416
Query: 436 IAVPTGIKIFR*LATIHGTQINY 504
IAVPTGIKIF +AT+ I++
Sbjct: 417 IAVPTGIKIFSWIATMWMGSISF 439
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 104 bits (249), Expect = 2e-21
Identities = 52/84 (61%), Positives = 58/84 (69%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T N+R I +L LF AV ITA AG IT++LTDRN NTSFF+ AGGG
Sbjct: 168 TTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGG 227
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
DPILYQHLF FFGHPEVYILI+PG
Sbjct: 228 DPILYQHLFWFFGHPEVYILIIPG 251
Score = 78.2 bits (184), Expect = 1e-13
Identities = 40/83 (48%), Positives = 52/83 (62%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GIIS IS K F F+V +HH++TVG+D+DTRAYFT+AT+I
Sbjct: 253 GIISTTISAN-SNKSVFGYLGMVYAMCSIGILGFVVWSHHMYTVGLDVDTRAYFTAATLI 311
Query: 436 IAVPTGIKIFR*LATIHGTQINY 504
IAVPTGIKIF LAT +G +++
Sbjct: 312 IAVPTGIKIFSWLATCYGGSLHF 334
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 103 bits (247), Expect = 3e-21
Identities = 52/84 (61%), Positives = 60/84 (71%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T++N+R I +L LF AV ITA A AIT+LLTDRNLNTSF++ AGGG
Sbjct: 194 TLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGG 253
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
D ILYQHLF FFGHPEVYILI+PG
Sbjct: 254 DAILYQHLFWFFGHPEVYILIIPG 277
Score = 79.4 bits (187), Expect = 5e-14
Identities = 39/83 (46%), Positives = 53/83 (63%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GIIS +IS K F FIV +HH++TVG+D+DTRAYFT+AT+I
Sbjct: 279 GIISTVISAN-SNKNVFGYLGMVYAMMSIGLLGFIVWSHHMYTVGLDVDTRAYFTAATLI 337
Query: 436 IAVPTGIKIFR*LATIHGTQINY 504
IA+PTG+KIF LAT +G +++
Sbjct: 338 IAIPTGVKIFSWLATCYGGSLHF 360
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 103 bits (246), Expect = 4e-21
Identities = 48/83 (57%), Positives = 60/83 (72%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TIIN+R N + + +LPLFV +V ITA A +T+LL DRN NTSFF +GGG
Sbjct: 185 TIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGG 244
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
DP+LY+H+F FFGHPEVYILI+P
Sbjct: 245 DPLLYEHIFWFFGHPEVYILIVP 267
Score = 70.9 bits (166), Expect = 2e-11
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G++S I+ Q KK F F V +HH+FTVG+D D+RAYF+ A++I
Sbjct: 270 GVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADSRAYFSGASLI 328
Query: 436 IAVPTGIKIFR*LATIHGTQINY 504
IA+PTG KIF LATI+G + +
Sbjct: 329 IAIPTGSKIFSWLATIYGGTLRW 351
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 103 bits (246), Expect = 4e-21
Identities = 48/83 (57%), Positives = 60/83 (72%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TIIN+R N + + +LPLFV +V ITA A +T+LL DRN NTSFF +GGG
Sbjct: 185 TIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGG 244
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
DP+LY+H+F FFGHPEVYILI+P
Sbjct: 245 DPLLYEHIFWFFGHPEVYILIVP 267
Score = 33.1 bits (72), Expect = 4.4
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 408
G++S I+ Q KK F F V +HH+FTVG+D D R
Sbjct: 270 GVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADKR 319
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 102 bits (245), Expect = 5e-21
Identities = 49/78 (62%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Frame = +2
Query: 23 NNISFDQ-LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 199
N F++ LPLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQ
Sbjct: 177 NEAMFNKDLPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQ 236
Query: 200 HLF*FFGHPEVYILILPG 253
HLF FFGHPEVYILILPG
Sbjct: 237 HLFWFFGHPEVYILILPG 254
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G++SHII+ KK F FIV AHH++T GID T+AYFT+AT++
Sbjct: 256 GLVSHIIATF-SKKRVFGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTSTKAYFTAATMV 314
Query: 436 IAVPTGIKIFR*LATIHGTQI 498
IA+PTGIK+F +AT+ G I
Sbjct: 315 IAIPTGIKVFNWIATMWGGSI 335
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 97.1 bits (231), Expect = 2e-19
Identities = 46/74 (62%), Positives = 56/74 (75%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T++N+R + ++ ++PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGG
Sbjct: 86 TVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGG 145
Query: 182 DPILYQHLF*FFGH 223
DPILYQHLF F GH
Sbjct: 146 DPILYQHLFWFXGH 159
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 96.7 bits (230), Expect = 3e-19
Identities = 45/84 (53%), Positives = 58/84 (69%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G+ISHI++ GKKE F FIV AHH+FTVG+D+DTRAYFTSAT+I
Sbjct: 17 GMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMI 76
Query: 436 IAVPTGIKIFR*LATIHGTQINYN 507
IA+PTG+K+F LAT+HG I ++
Sbjct: 77 IAIPTGVKVFSWLATLHGGSIKWD 100
Score = 35.5 bits (78), Expect = 0.82
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 212 FFGHPEVYILILPG 253
FFGHPEVYILILPG
Sbjct: 2 FFGHPEVYILILPG 15
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 93.9 bits (223), Expect = 2e-18
Identities = 56/123 (45%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = +1
Query: 142 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIGI-ISHIISQERGKKETFXXXX 318
K KYIIF S W F+STFILIFWT SLYFNFT I S+ + K +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 319 XXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI 498
+ + + +I++ YFTSAT+IIAVPTGIKIF LAT HGTQI
Sbjct: 67 NLCYISNWIISIYCLSSSYIYSSN-SYWYSTYFTSATMIIAVPTGIKIFSWLATFHGTQI 125
Query: 499 NYN 507
NY+
Sbjct: 126 NYS 128
Score = 81.4 bits (192), Expect = 1e-14
Identities = 43/99 (43%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +3
Query: 255 WYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSYIHCXXXXXXXXXXXXXXXX 434
WYNFSYYF K KK N W+F +NLCY SNW+I IYCLSSSYI+
Sbjct: 45 WYNFSYYFPSKSKKGNLWVFSDNLCYISNWIISIYCLSSSYIYSSNSYWYSTYFTSATMI 104
Query: 435 XXXXXXXXXF-*MTSYNTWNSN*L*PNXL*RLGFVFLFT 548
F + +++ N P+ L LGFVFLFT
Sbjct: 105 IAVPTGIKIFSWLATFHGTQIN-YSPSILWSLGFVFLFT 142
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 92.3 bits (219), Expect = 7e-18
Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T N+R ++ DQ+ +FV +T+F AG++ LL DRN NTSF+D GG
Sbjct: 177 TTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGG 236
Query: 182 DPILYQHLF*FFGHPEVYILILP--GLV*FLILF 277
+P+LYQHLF FFGHPEVY++ILP G++ +LF
Sbjct: 237 NPLLYQHLFWFFGHPEVYVIILPVFGIISEAVLF 270
Score = 58.8 bits (136), Expect = 8e-08
Identities = 23/41 (56%), Positives = 33/41 (80%)
Frame = +1
Query: 370 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT 492
HH++T G+DIDTR YF++AT+IIA+P+ +KIF L T G+
Sbjct: 300 HHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGS 340
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 90.6 bits (215), Expect = 2e-17
Identities = 41/83 (49%), Positives = 57/83 (68%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G+ISH+I+ GK+E F F+V AHH+FTVG+D+DTRAYFT+AT+I
Sbjct: 229 GMISHVIAHYSGKREPFGYLGMVYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMI 288
Query: 436 IAVPTGIKIFR*LATIHGTQINY 504
IAVPTGIK+F +AT+ G+ + +
Sbjct: 289 IAVPTGIKVFSWMATLQGSNLQW 311
Score = 72.1 bits (169), Expect = 8e-12
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +2
Query: 143 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 253
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPG
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPG 227
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 90.6 bits (215), Expect = 2e-17
Identities = 43/73 (58%), Positives = 53/73 (72%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T++N+R ++ ++PLFV +V ITA AGAIT+LLTDR NT+FFDPAGGG
Sbjct: 168 TVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGG 227
Query: 182 DPILYQHLF*FFG 220
DPILYQHLF FFG
Sbjct: 228 DPILYQHLFWFFG 240
Score = 70.5 bits (165), Expect = 2e-11
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +1
Query: 355 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 501
FIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRN 298
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 89.0 bits (211), Expect = 6e-17
Identities = 41/69 (59%), Positives = 51/69 (73%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T++N+R ++ +LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGG
Sbjct: 167 TVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGG 226
Query: 182 DPILYQHLF 208
DPILYQHLF
Sbjct: 227 DPILYQHLF 235
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 87.0 bits (206), Expect = 3e-16
Identities = 41/82 (50%), Positives = 55/82 (67%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T +N+R N ++ +LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGG
Sbjct: 168 TTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGG 227
Query: 182 DPILYQHLF*FFGHPEVYILIL 247
DPILY+HLF FFG I++L
Sbjct: 228 DPILYEHLFWFFGQTVATIIML 249
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 87.0 bits (206), Expect = 3e-16
Identities = 42/83 (50%), Positives = 52/83 (62%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T+ R SF LF+ A ITA AG +T++L DRN NTSF+D GGG
Sbjct: 170 TLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGG 229
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
D IL+QH+F FFGHPEVYI++LP
Sbjct: 230 DLILFQHIFWFFGHPEVYIILLP 252
Score = 48.8 bits (111), Expect = 8e-05
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +1
Query: 367 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 465
AHH+F VG+D+D+RAYF +I+I +PT +K+F
Sbjct: 291 AHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLF 323
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 86.6 bits (205), Expect = 3e-16
Identities = 42/69 (60%), Positives = 49/69 (71%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T+IN+R + + + LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGG
Sbjct: 150 TVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGG 209
Query: 182 DPILYQHLF 208
DPILYQHLF
Sbjct: 210 DPILYQHLF 218
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 86.6 bits (205), Expect = 3e-16
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = +2
Query: 119 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 253
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PG
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPG 276
Score = 70.9 bits (166), Expect = 2e-11
Identities = 31/43 (72%), Positives = 38/43 (88%)
Frame = +1
Query: 370 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI 498
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSI 391
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 85.8 bits (203), Expect = 6e-16
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +2
Query: 110 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 253
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPG
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPG 340
Score = 50.8 bits (116), Expect = 2e-05
Identities = 26/70 (37%), Positives = 34/70 (48%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GI+SHI +F +V HH+F VG D T +F+S T+I
Sbjct: 342 GIVSHICMSLSNNDSSFGYYGLICAMASIVCLGSVVWGHHMFMVGFDSLTGVFFSSITMI 401
Query: 436 IAVPTGIKIF 465
I VPTGIK+F
Sbjct: 402 IGVPTGIKVF 411
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 85.4 bits (202), Expect = 8e-16
Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 TIINIRLNNISFDQL-PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 178
TI N+R+ + F L P+ + + T+ A +T+LL DR+ +TSF+ P GG
Sbjct: 169 TIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGG 228
Query: 179 GDPILYQHLF*FFGHPEVYILILP 250
GDPIL+QHLF FFGHPEVYILILP
Sbjct: 229 GDPILWQHLFWFFGHPEVYILILP 252
Score = 79.8 bits (188), Expect = 4e-14
Identities = 37/78 (47%), Positives = 48/78 (61%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G+ISHI+ + K F F+V HH+F G+DIDTRAYFT+AT++
Sbjct: 255 GVISHILCRSSAKLHVFGKIGMSWASMGIAWMGFLVWGHHMFVAGLDIDTRAYFTAATLM 314
Query: 436 IAVPTGIKIFR*LATIHG 489
IAVPTG+K+F LATI G
Sbjct: 315 IAVPTGVKVFNWLATIFG 332
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 84.6 bits (200), Expect = 1e-15
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TIIN+R N + + +LPLFV +V ITA A +T+LL DRN NTSFF +GGG
Sbjct: 185 TIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGG 244
Query: 182 DPILYQHLF*FFGH--PEVYILIL 247
DP+LY+H+F FFG P + I+I+
Sbjct: 245 DPLLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 83.4 bits (197), Expect = 3e-15
Identities = 39/73 (53%), Positives = 50/73 (68%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T +N+R N ++ +LPLFV A+ ITA + +T+LL DRN NTSFF+ AGGG
Sbjct: 168 TTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGG 227
Query: 182 DPILYQHLF*FFG 220
DPILY+HLF FFG
Sbjct: 228 DPILYEHLFWFFG 240
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 81.4 bits (192), Expect = 1e-14
Identities = 39/85 (45%), Positives = 54/85 (63%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T+ R +S D++PLFV ++ +T+F A T L+ DR + T FF+PA GG
Sbjct: 183 TVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGG 242
Query: 182 DPILYQHLF*FFGHPEVYILILPGL 256
D +L+QHLF FFGHPEVYI+ LP +
Sbjct: 243 DVLLWQHLFWFFGHPEVYIIFLPAV 267
Score = 39.1 bits (87), Expect = 0.066
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +1
Query: 370 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 483
HH+F G+ ++FT++++ IAVP G++IF LATI
Sbjct: 305 HHMFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATI 342
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 81.4 bits (192), Expect = 1e-14
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TIIN+R +S ++PLFV + + A A+ +LL DR L ++FFDP GG
Sbjct: 186 TIINLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGG 245
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
+L+QH F FGHPEVYILILPG
Sbjct: 246 SAVLWQHYFWIFGHPEVYILILPG 269
Score = 50.4 bits (115), Expect = 3e-05
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +1
Query: 367 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 507
AHH+F VG+ + +F +++IA+PTGIK+F AT+ G +I +N
Sbjct: 307 AHHMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFN 353
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 81.0 bits (191), Expect = 2e-14
Identities = 43/69 (62%), Positives = 51/69 (73%)
Frame = -3
Query: 207 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 28
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 27 LFNRILIIV 1
+R+LI V
Sbjct: 60 PADRMLITV 68
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 79.8 bits (188), Expect = 4e-14
Identities = 38/83 (45%), Positives = 52/83 (62%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T++++R ++ L + ++ IT+ G + +LL+D + NT FFDP G
Sbjct: 173 TVMHLRAKGLTLGILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAG 232
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
DPILYQHLF FFGHPEVYILILP
Sbjct: 233 DPILYQHLFWFFGHPEVYILILP 255
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G+ISH+IS + F +V HH++T G+++DTRAYFTS TI+
Sbjct: 258 GVISHVISTNYCRN-LFGNQSMILAMGCIAVLGSLVWVHHMYTTGLEVDTRAYFTSTTIL 316
Query: 436 IAVPTGIKIFR*LAT 480
I++PTG K+F + T
Sbjct: 317 ISIPTGTKVFNWICT 331
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 78.6 bits (185), Expect = 9e-14
Identities = 38/82 (46%), Positives = 51/82 (62%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T IN+R + ++ +PLF AV TA A +T+ + DRN NTSFF+ AGGG
Sbjct: 173 TFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGG 232
Query: 182 DPILYQHLF*FFGHPEVYILIL 247
D +LYQHLF ++ HPEV I+ L
Sbjct: 233 DAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 78.6 bits (185), Expect = 9e-14
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI+ +R+ ++ +PLF A+ T+ A A+ +L D TSFF+P GGG
Sbjct: 178 TILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGG 237
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
DP++YQHLF F+ HP VYI+ILP
Sbjct: 238 DPVVYQHLFWFYSHPAVYIMILP 260
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/84 (36%), Positives = 41/84 (48%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G+IS +I +K F IV AHH+FT G R +F + T++
Sbjct: 263 GVISEVIPVH-ARKPIFGYRAIAYSSLAISFLGLIVWAHHMFTSGTPGWLRMFFMATTML 321
Query: 436 IAVPTGIKIFR*LATIHGTQINYN 507
IAVPTGIKIF T+ G +I N
Sbjct: 322 IAVPTGIKIFSWCGTLWGGKIQLN 345
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 78.2 bits (184), Expect = 1e-13
Identities = 40/83 (48%), Positives = 51/83 (61%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI+N+R ++ +++PLFV + AF A LL DR+ T FF P GG
Sbjct: 185 TILNMRAPGMTLNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGG 244
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
D +L+QHLF FFGHPEVYILILP
Sbjct: 245 DAVLWQHLFWFFGHPEVYILILP 267
Score = 52.8 bits (121), Expect = 5e-06
Identities = 30/83 (36%), Positives = 44/83 (53%)
Frame = +1
Query: 253 IGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATI 432
+GIIS ++ +K F F+V AHH+F VG+ A+F +A+
Sbjct: 269 MGIISEVLPTF-SRKPIFGYAFVAYSGVAIGFLGFLVWAHHMFAVGLGPLANAFFGAASF 327
Query: 433 IIAVPTGIKIFR*LATIHGTQIN 501
+IAVPTG+KIF LAT+ +N
Sbjct: 328 LIAVPTGVKIFNWLATMWQGSLN 350
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 77.4 bits (182), Expect = 2e-13
Identities = 41/91 (45%), Positives = 59/91 (64%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TIIN+R N + + +LPLFV +V ITA A +T+LL DRN NTSFF +GGG
Sbjct: 185 TIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGG 244
Query: 182 DPILYQHLF*FFGHPEVYILILPGLV*FLIL 274
DP+LY+H+ F+ +P + ++ L + +LIL
Sbjct: 245 DPLLYEHI--FYKNPVLILIWLTSGI-YLIL 272
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 76.2 bits (179), Expect = 5e-13
Identities = 34/69 (49%), Positives = 46/69 (66%)
Frame = +2
Query: 44 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 223
L LF ++ + + A IT++LTD++L T F+D GGDP+LYQHLF FFGH
Sbjct: 165 LSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGH 224
Query: 224 PEVYILILP 250
PEVY++ILP
Sbjct: 225 PEVYVVILP 233
Score = 65.3 bits (152), Expect = 9e-10
Identities = 28/42 (66%), Positives = 38/42 (90%)
Frame = +1
Query: 358 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 483
+V AHH++T G+DIDTR+YFT+AT+IIAVPTGIKIF L+++
Sbjct: 269 VVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSL 310
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/92 (40%), Positives = 49/92 (53%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TII +R + F ++P+FV G +LL D + TSFF P GGG
Sbjct: 193 TIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGG 252
Query: 182 DPILYQHLF*FFGHPEVYILILPGLV*FLILF 277
DP+L+QH F F+ HP VY+L+LP F LF
Sbjct: 253 DPVLFQHFFWFYSHPAVYVLVLPVFGIFSELF 284
Score = 41.5 bits (93), Expect = 0.012
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +1
Query: 358 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 507
IV AHH+F G R F T++IA+PTG+K+F L T+ + N
Sbjct: 311 IVWAHHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLN 360
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 74.1 bits (174), Expect = 2e-12
Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 10/95 (10%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP---- 169
T+IN+R+ +SF +LPL + A ITA A +L+ DR+L TSFF
Sbjct: 219 TVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYI 278
Query: 170 AG------GGDPILYQHLF*FFGHPEVYILILPGL 256
AG GG P+L+QHLF F GHPEVYI+++P L
Sbjct: 279 AGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPAL 313
Score = 41.1 bits (92), Expect = 0.016
Identities = 24/77 (31%), Positives = 37/77 (48%)
Frame = +1
Query: 253 IGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATI 432
+GI S +I+ +K F FIV AHH+F G++ + F T+
Sbjct: 313 LGITSEVIATN-ARKPIFGYKAMIGSILGIAVLSFIVWAHHMFVTGMNPFLGSVFMFLTL 371
Query: 433 IIAVPTGIKIFR*LATI 483
IIAVP+ +K F + T+
Sbjct: 372 IIAVPSAVKSFNYITTL 388
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 73.7 bits (173), Expect = 3e-12
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA--- 172
T+I +R +++ +LPL + + +TA A +LL DR+ T FF
Sbjct: 200 TVIRLRAPGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASA 259
Query: 173 --GGGDPILYQHLF*FFGHPEVYILILP 250
GGGDPIL+QHLF FGHPEVYI+ILP
Sbjct: 260 VRGGGDPILWQHLFWIFGHPEVYIMILP 287
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 73.3 bits (172), Expect = 3e-12
Identities = 32/84 (38%), Positives = 48/84 (57%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T +++ D++ ++ +T+F ++ DR+ NT FF+ + G
Sbjct: 173 TFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSG 232
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
DP+LYQHLF FFGHPEVYI+ILPG
Sbjct: 233 DPVLYQHLFWFFGHPEVYIMILPG 256
Score = 33.5 bits (73), Expect = 3.3
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 412 YFTSATIIIAVPTGIKIFR*LATI 483
YFT+ TI+IA+PTG KIF + T+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTL 332
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 70.9 bits (166), Expect = 2e-11
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TIIN+R +++ +LPLF + + + +++ DR T+FF+P GG
Sbjct: 176 TIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGG 235
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
+ ++++HLF FGHPEVYILILP
Sbjct: 236 NTVIWEHLFWIFGHPEVYILILP 258
Score = 52.4 bits (120), Expect = 7e-06
Identities = 25/50 (50%), Positives = 31/50 (62%)
Frame = +1
Query: 355 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 504
F+V HH+FT G+ A F AT+ IA+PTGIKIF L TI G + Y
Sbjct: 293 FMVWVHHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKY 342
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 70.5 bits (165), Expect = 2e-11
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +1
Query: 394 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 504
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINY 37
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 70.1 bits (164), Expect = 3e-11
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T I +R +F + LFV + AGA+T+L D+ L T+FF+PA GG
Sbjct: 123 TYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPAKGG 182
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
DP++YQ++F F+ HP VY+ +LP
Sbjct: 183 DPLIYQNIFWFYSHPVVYVQVLP 205
Score = 46.4 bits (105), Expect = 4e-04
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +1
Query: 355 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 504
F + HH+F G+ TR F+ T++IAVPTGIKIF + T++ I++
Sbjct: 240 FFLWIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHF 289
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 69.7 bits (163), Expect = 4e-11
Identities = 36/85 (42%), Positives = 49/85 (57%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI ++ +S +++P+FV AV + +F A +L DR FF A G
Sbjct: 190 TIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASG 248
Query: 182 DPILYQHLF*FFGHPEVYILILPGL 256
DPIL+QHLF FFGHPEVYI+ +P L
Sbjct: 249 DPILWQHLFWFFGHPEVYIIFIPAL 273
Score = 40.7 bits (91), Expect = 0.022
Identities = 16/42 (38%), Positives = 31/42 (73%)
Frame = +1
Query: 370 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 495
HH+FT G+ +FT+++ +IA+P+G++IF +AT+ G++
Sbjct: 311 HHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSK 352
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 68.9 bits (161), Expect = 7e-11
Identities = 33/85 (38%), Positives = 49/85 (57%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI+N+R ++ ++P+FV +T+ A+ +L+ DR +FF+ GG
Sbjct: 187 TILNMRAPGMTLMKMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGG 246
Query: 182 DPILYQHLF*FFGHPEVYILILPGL 256
+ YQHLF FGHPEVYILILP +
Sbjct: 247 SVVFYQHLFWTFGHPEVYILILPAM 271
Score = 53.6 bits (123), Expect = 3e-06
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +1
Query: 253 IGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATI 432
+GIIS +I +K F F V +HH+FTVG+ + F+ T+
Sbjct: 271 MGIISEVIPVH-ARKMLFGYSVMVFSTALIGFMGFTVWSHHMFTVGMGPVVNSIFSLTTM 329
Query: 433 IIAVPTGIKIFR*LATIHGTQINY 504
IAVPTG+KIF L+T+ G QI +
Sbjct: 330 AIAVPTGVKIFNWLSTMWGGQIRF 353
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 68.5 bits (160), Expect = 9e-11
Identities = 32/85 (37%), Positives = 48/85 (56%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T++ +R + +S D+LP+ V + + A +L DRN T FFD A GG
Sbjct: 203 TLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGG 262
Query: 182 DPILYQHLF*FFGHPEVYILILPGL 256
P+L+QHLF F HP VY+++LP +
Sbjct: 263 RPLLWQHLFWMFAHPWVYVVVLPAM 287
Score = 37.1 bits (82), Expect = 0.27
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 355 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 483
F V HH+F GI A+F +A+++I++P+ + +F +ATI
Sbjct: 320 FEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATI 362
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 68.5 bits (160), Expect = 9e-11
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI R N+S+ L +F + + AI +LL DRN TSFF AG G
Sbjct: 254 TIFTERGKNVSWANLDIFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF--AGEG 311
Query: 182 DPILYQHLF*FFGHPEVYILILP--GLV*FLI 271
IL+QHLF FFGHPEVYI++LP G++ +++
Sbjct: 312 GAILWQHLFWFFGHPEVYIIVLPPMGIISYIL 343
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/77 (32%), Positives = 40/77 (51%)
Frame = +1
Query: 253 IGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATI 432
+GIIS+I+ + G++ F F V AHH+F G+D RA F + ++
Sbjct: 336 MGIISYILPRFSGRR-LFGFKFVVYSTLAIGVLSFGVWAHHMFATGLDPRLRASFMAVSL 394
Query: 433 IIAVPTGIKIFR*LATI 483
IAVP+ +K F + T+
Sbjct: 395 AIAVPSAVKTFNWITTM 411
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 68.1 bits (159), Expect = 1e-10
Identities = 34/85 (40%), Positives = 50/85 (58%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI+ + ++S Q+PL + ++ A A+ +LLTDR + FF+PA GG
Sbjct: 169 TILKCKHPDMSLGQVPLLAWSYLSSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGG 228
Query: 182 DPILYQHLF*FFGHPEVYILILPGL 256
DPI Y HLF F HPEVY+L++P +
Sbjct: 229 DPIAYAHLFWFTFHPEVYVLVIPAI 253
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 68.1 bits (159), Expect = 1e-10
Identities = 30/85 (35%), Positives = 50/85 (58%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI N+R +S ++P++V +V + A ++L +R + S+F+PA GG
Sbjct: 177 TIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGG 236
Query: 182 DPILYQHLF*FFGHPEVYILILPGL 256
DP+L+Q F F+ HP VY+++LP L
Sbjct: 237 DPVLFQQFFWFYSHPTVYVMLLPYL 261
Score = 42.7 bits (96), Expect = 0.005
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +1
Query: 358 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNLIXY 519
+V AHH+FTVG + F T +IAVPTG+K+F + T+ G ++ Y
Sbjct: 295 MVWAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLY 348
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 67.7 bits (158), Expect = 2e-10
Identities = 32/74 (43%), Positives = 48/74 (64%)
Frame = +2
Query: 29 ISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 208
++F + ++ ++ +T+ AIT LL DRN+N++ +D G DP+LYQHLF
Sbjct: 188 LTFMNINIYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLF 245
Query: 209 *FFGHPEVYILILP 250
FFGHPEVY++ILP
Sbjct: 246 WFFGHPEVYVIILP 259
Score = 55.6 bits (128), Expect = 7e-07
Identities = 22/37 (59%), Positives = 32/37 (86%)
Frame = +1
Query: 355 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 465
+ V AHH+FTVG+DID+R+YF+ AT II++PT +K+F
Sbjct: 294 YFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMF 330
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +2
Query: 116 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 250
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLP 303
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +1
Query: 253 IGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATI 432
+GI+S I+ + G+K F F V AHH+FT GID R+ F + ++
Sbjct: 305 MGIVSLILPKFSGRK-LFGFKFVVYSTLAIGVLSFGVWAHHMFTTGIDPRIRSSFMAVSL 363
Query: 433 IIAVPTGIKIFR*LATI 483
I++P+ +K+F + T+
Sbjct: 364 AISIPSAVKVFNWITTM 380
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 67.3 bits (157), Expect = 2e-10
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGG 178
T +R I++ ++PLFV A+ T+ G + +L+T NL FDPA G
Sbjct: 193 TCHTMRAPGITWFKMPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARG 251
Query: 179 GDPILYQHLF*FFGHPEVYILILP 250
GDP+L+QHLF F+ HP VYI++LP
Sbjct: 252 GDPVLFQHLFWFYSHPAVYIMVLP 275
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 66.5 bits (155), Expect = 4e-10
Identities = 32/80 (40%), Positives = 43/80 (53%)
Frame = +2
Query: 17 RLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 196
++ + + ++PLFV TA + +R T FFD A GG P+L+
Sbjct: 170 KMKKVPYLKMPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLW 229
Query: 197 QHLF*FFGHPEVYILILPGL 256
Q LF FFGHPEVYILILP +
Sbjct: 230 QQLFWFFGHPEVYILILPAM 249
Score = 37.1 bits (82), Expect = 0.27
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 370 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 504
HH+FT + + ++ T+ IA+P+G+K+ AT++G +I Y
Sbjct: 288 HHMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRY 332
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 66.1 bits (154), Expect = 5e-10
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----D 166
TI +R +I + LF +V + A +LL +R+L FF D
Sbjct: 172 TITRLRRPDIKMLDMSLFAWSVLAASMLMVTALPPLAAGAIMLLLERHLGMHFFTPVPGD 231
Query: 167 PAGGGDPILYQHLF*FFGHPEVYILILPGL 256
PA GDP L+QH+F FFGHPEVYIL+LP +
Sbjct: 232 PAASGDPRLFQHIFWFFGHPEVYILVLPAM 261
Score = 46.8 bits (106), Expect = 3e-04
Identities = 23/82 (28%), Positives = 41/82 (50%)
Frame = +1
Query: 253 IGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATI 432
+G++S +I Q ++ + F V HH+FT D R AT+
Sbjct: 261 MGLVSEVI-QRMARRRAYGYTAIAISSVAIASISFAVWMHHMFTAVQDFAPRVAMAIATM 319
Query: 433 IIAVPTGIKIFR*LATIHGTQI 498
+A+P+G+K+F +AT++G +I
Sbjct: 320 AVAIPSGVKVFNWVATLYGGRI 341
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 65.7 bits (153), Expect = 7e-10
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +1
Query: 391 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 507
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYS 39
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 65.7 bits (153), Expect = 7e-10
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = +2
Query: 116 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 250
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIP 410
Score = 35.9 bits (79), Expect = 0.62
Identities = 13/36 (36%), Positives = 26/36 (72%)
Frame = +1
Query: 355 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKI 462
++V HH++ VG+D +R +++ TI+I++P IK+
Sbjct: 445 YLVWGHHMYLVGLDHRSRTMYSTITIMISMPATIKV 480
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 65.3 bits (152), Expect = 9e-10
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGG 178
TI +R I + ++P+F ++ T +LL DRNL T FF +PAGG
Sbjct: 176 TIAAMRAPGIGWFKMPMFTWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGG 235
Query: 179 GDPILYQHLF*FFGHPEVYILILPGL 256
+L+ HLF FFGHPEVYIL+ P L
Sbjct: 236 A--LLWDHLFWFFGHPEVYILLFPAL 259
Score = 39.1 bits (87), Expect = 0.066
Identities = 21/89 (23%), Positives = 43/89 (48%)
Frame = +1
Query: 244 FTRIGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTS 423
F +G ++ +IS GK + F+V HH+F G +I TR +++
Sbjct: 256 FPALGAMADVISTFSGKP-IYAKRYILTAFLIATIISFVVWMHHMFITGTNIYTRLFYSI 314
Query: 424 ATIIIAVPTGIKIFR*LATIHGTQINYNL 510
TI+I++P + + + T++ ++ Y +
Sbjct: 315 TTILISIPFEMAVMSFIFTLYKGRLVYTV 343
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 64.9 bits (151), Expect = 1e-09
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP---- 169
TII +R ++ +LPL + A+ ITA A ++L DR + T FF P
Sbjct: 205 TIIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLV 264
Query: 170 -------AGGGDPILYQHLF*FFGHPEVYILILPGL 256
AGGG P+L+QHLF F+ HP VYI+ILP +
Sbjct: 265 VNNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAM 300
Score = 41.9 bits (94), Expect = 0.009
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +1
Query: 355 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 504
FIV HH+F G++ F AT++IA+P+ +K F L T++G ++ +
Sbjct: 333 FIVWGHHMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQF 382
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 64.1 bits (149), Expect = 2e-09
Identities = 28/85 (32%), Positives = 46/85 (54%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T +R + + +LPLFV ++ T+ ++ ++ + FDPA GG
Sbjct: 186 TTHTMRAPGMGWTRLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGG 245
Query: 182 DPILYQHLF*FFGHPEVYILILPGL 256
DP+L+QH F F+ HP VYI++LP +
Sbjct: 246 DPVLFQHFFWFYSHPAVYIMVLPAM 270
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 63.7 bits (148), Expect = 3e-09
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGG 178
T+ +R I +++L +FV A + AF G A+T+L D+ + T FFD A G
Sbjct: 167 TVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAG 225
Query: 179 GDPILYQHLF*FFGHPEVYILILP 250
GD + YQ+LF F+ HP VY++ LP
Sbjct: 226 GDALTYQNLFWFYSHPAVYVIFLP 249
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 63.7 bits (148), Expect = 3e-09
Identities = 43/106 (40%), Positives = 56/106 (52%), Gaps = 13/106 (12%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AV-GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-- 172
T++ R ++ +LPL V + T G++ +LL DR L TSFF P
Sbjct: 197 TVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPALFVGSVMLLL-DRLLGTSFFMPTLV 255
Query: 173 --------GGGDPILYQHLF*FFGHPEVYILILP--GLV*FLILFH 280
GGG P+L+QHLF FFGHPEVYI+ LP G+V LI H
Sbjct: 256 EMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDLISTH 301
Score = 43.6 bits (98), Expect = 0.003
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GI+S +IS +K F F+V AHH++ G+ +F + T+I
Sbjct: 292 GIVSDLISTH-ARKNIFGYRMMVWAIVAIGALSFVVWAHHMYVSGMYPYFGFFFATTTLI 350
Query: 436 IAVPTGIKIFR*LATI-HG 489
IA+PT IK++ + T+ HG
Sbjct: 351 IAIPTAIKVYNWVLTLWHG 369
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 62.9 bits (146), Expect = 5e-09
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +2
Query: 8 INIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 187
+ R +S ++P+F A+ I A A +L +R+ FF GGDP
Sbjct: 195 LRTRPPGMSLTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDP 254
Query: 188 ILYQHLF*FFGHPEVYILILP--GLV*FLI 271
+L+QHLF FFGHPEVYI+ LP GLV ++
Sbjct: 255 LLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
Score = 42.7 bits (96), Expect = 0.005
Identities = 16/47 (34%), Positives = 33/47 (70%)
Frame = +1
Query: 370 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNL 510
HH+FT GI + +F++A++ +A+P+GI++F +ATI ++ + +
Sbjct: 315 HHMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRI 361
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 61.7 bits (143), Expect = 1e-08
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T++ R +S ++P+F +TA +L +R + FF A GG
Sbjct: 183 TVLRYRAPGMSLSKMPIFAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGG 242
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
D +L+QHLF FGHPEVYI+ LP
Sbjct: 243 DALLWQHLFWLFGHPEVYIIFLP 265
Score = 37.9 bits (84), Expect = 0.15
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +1
Query: 370 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 483
HH+FT GI A+F++A+ ++AVPT +++F + T+
Sbjct: 305 HHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTL 342
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 61.7 bits (143), Expect = 1e-08
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI+ +R ++ ++P+F + + + A +L DR L +DPA GG
Sbjct: 193 TILCLRAPGMTMFRMPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGG 252
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
+L+QHLF FFGHPEVY+L LP
Sbjct: 253 S-LLWQHLFWFFGHPEVYVLALP 274
Score = 34.3 bits (75), Expect = 1.9
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GI+S II +K F V AHH+F G + +F+ T +
Sbjct: 277 GIVSEIIPVF-SRKPMFGYVGLIFATLSIGALSMAVWAHHMFVTGAVL--LPFFSFMTFL 333
Query: 436 IAVPTGIKIFR*LATI 483
I+VPTG+K F + T+
Sbjct: 334 ISVPTGVKFFNWVGTM 349
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 61.3 bits (142), Expect = 1e-08
Identities = 24/37 (64%), Positives = 33/37 (89%)
Frame = +1
Query: 355 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 465
+ V AHH+FTVG+D+DTR YF+SAT++IA+PT IK+F
Sbjct: 42 YFVWAHHMFTVGLDVDTRVYFSSATLLIALPTSIKVF 78
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 60.9 bits (141), Expect = 2e-08
Identities = 31/82 (37%), Positives = 45/82 (54%)
Frame = +2
Query: 5 IINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGD 184
I+ R ++ ++P+F A+ + A A +L +R + FF GGD
Sbjct: 253 ILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGD 312
Query: 185 PILYQHLF*FFGHPEVYILILP 250
P+L+QHLF FFGHPEVYI+ LP
Sbjct: 313 PLLWQHLFWFFGHPEVYIIFLP 334
Score = 37.5 bits (83), Expect = 0.20
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +1
Query: 370 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT 480
HH+FT GI + ++F +A+ +A+P+G+++F +AT
Sbjct: 374 HHMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIAT 410
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 60.9 bits (141), Expect = 2e-08
Identities = 32/82 (39%), Positives = 44/82 (53%)
Frame = +2
Query: 5 IINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGD 184
I+ R +S ++P+ + + TAF +L +R L FFD GGD
Sbjct: 210 ILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGD 269
Query: 185 PILYQHLF*FFGHPEVYILILP 250
P+L+QHLF FGHPEVYI+ LP
Sbjct: 270 PLLWQHLFWLFGHPEVYIIFLP 291
Score = 42.3 bits (95), Expect = 0.007
Identities = 17/39 (43%), Positives = 30/39 (76%)
Frame = +1
Query: 367 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 483
AHH+F G+ I + + F++A+ ++AVPTG++IF +AT+
Sbjct: 330 AHHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATL 368
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 60.1 bits (139), Expect = 3e-08
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T++ R +S D++P++ +TA +L +R FF A GG
Sbjct: 183 TVLRFRAPGMSLDRMPIYGWYALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGG 242
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
D +L+QHLF FGHPEVYI+ LP
Sbjct: 243 DSLLWQHLFWLFGHPEVYIIFLP 265
Score = 37.5 bits (83), Expect = 0.20
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +1
Query: 370 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 483
HH+FT GI A F++A+ ++AVPT +++F + T+
Sbjct: 305 HHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTL 342
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 60.1 bits (139), Expect = 3e-08
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 137 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 250
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLP 291
Score = 38.3 bits (85), Expect = 0.12
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = +1
Query: 370 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 483
HH+FT G+ + +F++A+ + +PTGI++F +AT+
Sbjct: 331 HHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATL 368
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 59.7 bits (138), Expect = 4e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +1
Query: 55 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 222
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 59.3 bits (137), Expect = 6e-08
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-- 175
TIIN+R ++F +LP+ + + ITA + + DR T FF P+G
Sbjct: 208 TIINMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLV 267
Query: 176 ---------GGDPILYQHLF*FFGHPEVYILILP 250
GG P+L+QHLF F+ HP VYI++LP
Sbjct: 268 INNAAPTVGGGQPLLWQHLFWFYSHPAVYIMLLP 301
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +1
Query: 355 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNLI 513
FIV HH+FT G++ F +T++IA+P+ IK F ATI G ++ +N +
Sbjct: 336 FIVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTV 388
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 59.3 bits (137), Expect = 6e-08
Identities = 31/74 (41%), Positives = 43/74 (58%)
Frame = +2
Query: 26 NISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHL 205
+++ DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++
Sbjct: 8 SLNSDQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYM 67
Query: 206 F*FFGHPEVYILIL 247
FGH +V LIL
Sbjct: 68 LWLFGHTDVLFLIL 81
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 58.8 bits (136), Expect = 8e-08
Identities = 27/85 (31%), Positives = 44/85 (51%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI+N+R + ++P+F ++ T+ A + + L S F+P GG
Sbjct: 185 TIVNLRAPGMGLWKMPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGG 244
Query: 182 DPILYQHLF*FFGHPEVYILILPGL 256
P+LYQ F F+ HP VY+++LP L
Sbjct: 245 VPVLYQQFFWFYSHPAVYVMLLPYL 269
Score = 46.4 bits (105), Expect = 4e-04
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +1
Query: 358 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNLIXY 519
IV HH+F VGI + F +T+I+AVPTG+KIF + T+ G +I + Y
Sbjct: 303 IVWLHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTY 356
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 58.8 bits (136), Expect = 8e-08
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-- 175
T +++R +S ++P+ A IT+ A +L DR TSFF P+G
Sbjct: 204 TTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLV 263
Query: 176 ---------GGDPILYQHLF*FFGHPEVYILILPGL 256
GG +L+QHLF FFGHPEVYI ILP +
Sbjct: 264 FNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAM 299
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 56.0 bits (129), Expect = 5e-07
Identities = 22/44 (50%), Positives = 34/44 (77%)
Frame = +1
Query: 370 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 501
HH+FTVG+D++T +F+S T+II VPTGIK+F L + +++N
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVN 96
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 56.0 bits (129), Expect = 5e-07
Identities = 29/83 (34%), Positives = 43/83 (51%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI+ +R ++ ++P+F IT A+ +L DR FF GG
Sbjct: 207 TILKMRTKGMTLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGG 266
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
P+L+ +LF +GHPEVYI+ILP
Sbjct: 267 MPMLWANLFWIWGHPEVYIVILP 289
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GI S IIS +K+ F F+V HH FT+G ++F+ T+
Sbjct: 292 GIFSEIISSF-ARKQLFGYKAMVGSIIAISVLSFLVWTHHFFTMGNSASVNSFFSITTMA 350
Query: 436 IAVPTGIKIFR*LATIHGTQINY 504
I++PTG+KIF L T++ +I++
Sbjct: 351 ISIPTGVKIFNWLFTMYKGRISF 373
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 55.6 bits (128), Expect = 7e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1
Query: 367 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT 480
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGT 39
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 55.2 bits (127), Expect = 9e-07
Identities = 31/56 (55%), Positives = 36/56 (64%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 169
TI+N++ IS Q PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 156 TIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 55.2 bits (127), Expect = 9e-07
Identities = 27/78 (34%), Positives = 38/78 (48%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GI+SHI F +V AHH+F VG D+ T +F+S T++
Sbjct: 16 GIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVGYDVHTAVFFSSVTMV 75
Query: 436 IAVPTGIKIFR*LATIHG 489
I +PTGIK+F L + G
Sbjct: 76 IGIPTGIKVFSWLIMLGG 93
Score = 32.7 bits (71), Expect = 5.8
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 212 FFGHPEVYILILP 250
FFGHPEVY+LILP
Sbjct: 1 FFGHPEVYVLILP 13
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 1e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +1
Query: 376 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 465
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 54.4 bits (125), Expect = 2e-06
Identities = 29/83 (34%), Positives = 43/83 (51%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI+ +R +++ +LP V T A+ +L DR L T FF GG
Sbjct: 230 TIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAFPILGVALAMLGADRYLGTHFFTAGLGG 289
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
+ +LY +LF +GHPEVY ++LP
Sbjct: 290 NLMLYTNLFWIWGHPEVYFVVLP 312
Score = 40.7 bits (91), Expect = 0.022
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 370 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 483
HH FT+G +F++AT+++ +PTG+K+F T+
Sbjct: 352 HHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTL 389
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 54.0 bits (124), Expect = 2e-06
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T+I +R + +P+F GA+ +L DR L+ FF GG
Sbjct: 212 TVIKMRAPGMKLMDMPIFTWTCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGG 271
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
+ ++Y +LF +GHPEVYIL+LP
Sbjct: 272 NAMMYLNLFWAWGHPEVYILVLP 294
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/83 (33%), Positives = 44/83 (53%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GI S ++S GK+ F F+V HH FT+G + A+F AT+I
Sbjct: 297 GIFSEVVSTFAGKR-LFGHKSMIYASGAISVLGFMVWLHHFFTMGSGANVNAFFGIATMI 355
Query: 436 IAVPTGIKIFR*LATIHGTQINY 504
I++PTG+K+F L TI+ ++ +
Sbjct: 356 ISIPTGVKLFNWLFTIYKGRLRF 378
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 53.2 bits (122), Expect = 4e-06
Identities = 30/84 (35%), Positives = 43/84 (51%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI R LPLFV AV A G +LL ++ S++ GG
Sbjct: 197 TIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG 256
Query: 182 DPILYQHLF*FFGHPEVYILILPG 253
+++++LF +FGHPEVY+L+LPG
Sbjct: 257 -ALMWENLFWYFGHPEVYLLLLPG 279
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 52.0 bits (119), Expect = 9e-06
Identities = 27/83 (32%), Positives = 41/83 (49%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T++ +R + +P+F A+ +L DR L+ F GG
Sbjct: 211 TVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGG 270
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
+P++Y +LF +GHPEVYILILP
Sbjct: 271 NPMMYVNLFWAWGHPEVYILILP 293
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/83 (30%), Positives = 40/83 (48%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G+ S + S GK+ F F V HH FT+G +F AT++
Sbjct: 296 GVFSEVTSTFAGKR-LFGHHSMIYASGAIAVLGFAVWLHHFFTMGAGASVNTFFGLATML 354
Query: 436 IAVPTGIKIFR*LATIHGTQINY 504
I++PTG+K+F L TI+ ++ +
Sbjct: 355 ISIPTGVKLFNWLFTIYQGRLRF 377
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 51.6 bits (118), Expect = 1e-05
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = +3
Query: 255 WYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 368
WYNF YY+T K K W F NNLCY S W I +S
Sbjct: 21 WYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 51.2 bits (117), Expect = 2e-05
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +1
Query: 376 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT 492
++T G+++DTRA+FTS TI+I++PTG K+F L T T
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMST 39
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 397 IDTRAYFTSATIIIAVPTGIKIFR*LAT 480
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF------ 163
T+ +R + +P+F ++ +T + A+ IL +D L T++F
Sbjct: 178 TMYRMRAEGLRMRDIPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDG 237
Query: 164 -----DPAGGGDPILYQHLF*FFGHPEVYILILPGL 256
D G +L+ HLF FFGHPEVYI+ P L
Sbjct: 238 TTMATDADNPGASLLWAHLFWFFGHPEVYIVFFPAL 273
Score = 34.3 bits (75), Expect = 1.9
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +1
Query: 355 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 504
F+V HH+F GI++ + F + TI I++P + +F + T+ ++ +
Sbjct: 306 FVVWMHHMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRF 355
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 50.4 bits (115), Expect = 3e-05
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +1
Query: 385 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 507
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWD 336
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 50.0 bits (114), Expect = 4e-05
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +1
Query: 358 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 465
+V HH+F VG D+ T +F+S T+II VPTGIK+F
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVF 61
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 48.4 bits (110), Expect = 1e-04
Identities = 26/83 (31%), Positives = 42/83 (50%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI+ +R + F+++ +F+ + + + DR L+T F+ GG
Sbjct: 206 TILKLRKKKLFFNKISIFMWTCLCSNILILISFPILTILLFQIFLDRTLSTHFYSSFYGG 265
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
+LY +L +GHPEVYILILP
Sbjct: 266 QQMLYINLIWAWGHPEVYILILP 288
Score = 46.4 bits (105), Expect = 4e-04
Identities = 28/76 (36%), Positives = 38/76 (50%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
GI S IIS K F F+V HH FT+G + +F+ +T+I
Sbjct: 291 GIFSEIISYIC-VKSVFSYISLIYATISITVLSFLVWLHHFFTMGSGYLSNIFFSISTMI 349
Query: 436 IAVPTGIKIFR*LATI 483
IA+PTG+KIF + TI
Sbjct: 350 IAIPTGVKIFNWIFTI 365
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 1e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +1
Query: 58 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 210
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 46.8 bits (106), Expect = 3e-04
Identities = 29/83 (34%), Positives = 37/83 (44%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
TI R + +PLF TA L DR L+ FF GG
Sbjct: 231 TIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGG 290
Query: 182 DPILYQHLF*FFGHPEVYILILP 250
+ + + ++F FGHPEVYILILP
Sbjct: 291 NQMNFLNMFWLFGHPEVYILILP 313
Score = 39.9 bits (89), Expect = 0.038
Identities = 25/85 (29%), Positives = 40/85 (47%)
Frame = +1
Query: 256 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 435
G+ S I S GK F F+V HH FT+G A F A+++
Sbjct: 316 GVYSEIFSTFSGKV-LFGYKSLVWATISIAFLSFLVWLHHFFTMGQSGHINAVFGIASML 374
Query: 436 IAVPTGIKIFR*LATIHGTQINYNL 510
I +PTG+KI+ + T+ +I +++
Sbjct: 375 IGIPTGVKIYDWMWTMLRGRIRFSV 399
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 142
T+IN+R ++ D++PLF+ AV IT AGAIT+LLTDR
Sbjct: 108 TVINMRAKGMTLDRVPLFIWAVFITTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 42.7 bits (96), Expect = 0.005
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -1
Query: 491 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 360
VP + +H K LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 41.9 bits (94), Expect = 0.009
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +2
Query: 5 IINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 154
IIN+R ++ D++ L ++ ITA AGAIT+LLTDRN+NT
Sbjct: 152 IINMRHTMLTMDKISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 37.5 bits (83), Expect = 0.20
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = +2
Query: 2 TIINIRLNNISFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 181
T++ +R +S ++P+FV + A + L+D + F+ G
Sbjct: 261 TMVYMRAKGMSLGRVPIFVWGLFAAATTLVVESPATYTGALMDLSDMIAGSHFYT-GPTG 319
Query: 182 DPILYQHLF*FFGHPEVYILILPGLV*FL 268
P+ Y F F HPEVY+ ILP +L
Sbjct: 320 HPLAYLDQFWFLFHPEVYVFILPAFAIWL 348
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 33.5 bits (73), Expect = 3.3
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 182 DPILYQHLF*FFGHPEVYILILPGLV 259
+P+L + LF FFGHP VY +LP V
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYV 234
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 33.5 bits (73), Expect = 3.3
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 176 GGDPILYQHLF*FFGHPEVYILILPGLV 259
G DP+L + LF F GHP VY +LP +
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYI 251
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 33.5 bits (73), Expect = 3.3
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 70 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 249
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 250 RI-GIISHI 273
I I+H+
Sbjct: 154 SIRNRITHL 162
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 5.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 141 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 19
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 5.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 195 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 58
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,086,684
Number of Sequences: 1657284
Number of extensions: 6344363
Number of successful extensions: 16433
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 14846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16266
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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