Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1123
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0211 + 7898434-7898574,7898759-7899349,7899575-7899821,790...    29   4.7  
05_01_0475 - 3818121-3820565                                           28   6.2  

>02_02_0211 +
           7898434-7898574,7898759-7899349,7899575-7899821,
           7900020-7900118,7900158-7900321,7900371-7900870,
           7901007-7901256,7901461-7901549,7901823-7902064,
           7902175-7902479,7902798-7902906,7903150-7903313
          Length = 966

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 603 FQECNHSPLLSRTXVSKSKKTPTLYIGNL 689
           F EC H+P++SRT  +  +  PT  +  L
Sbjct: 412 FVECRHTPVVSRTYSTNKRPLPTTEVVKL 440


>05_01_0475 - 3818121-3820565
          Length = 814

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 122 LKMDMNNPPNQSYWFVLREDQSNVILS-TNNFVNQNPQ 232
           + +  +NPPN  YW    E  S+ ++S  N  +N NP+
Sbjct: 209 IDLSRSNPPNM-YWSWSSEKSSSALISLLNQLININPE 245


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,279,845
Number of Sequences: 37544
Number of extensions: 290246
Number of successful extensions: 524
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)