Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1120
(499 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 26 0.22
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 26 0.22
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 26 0.22
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 26 0.22
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 24 0.87
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 23 1.2
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 23 1.2
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 23 1.5
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 23 1.5
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 21 4.7
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 4.7
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 4.7
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 25.8 bits (54), Expect = 0.22
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 290 PAQNEIDIVXARFRNGDPVYKHPMIPGY 373
P + I RNGDP + H IP Y
Sbjct: 417 PVSISLLIAACGLRNGDPCFFHDTIPPY 444
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 25.8 bits (54), Expect = 0.22
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 290 PAQNEIDIVXARFRNGDPVYKHPMIPGY 373
P + I RNGDP + H IP Y
Sbjct: 417 PVSISLLIAACGLRNGDPCFFHDTIPPY 444
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 25.8 bits (54), Expect = 0.22
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 290 PAQNEIDIVXARFRNGDPVYKHPMIPGY 373
P + I RNGDP + H IP Y
Sbjct: 417 PVSISLLIAACGLRNGDPCFFHDTIPPY 444
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 25.8 bits (54), Expect = 0.22
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 290 PAQNEIDIVXARFRNGDPVYKHPMIPGY 373
P + I RNGDP + H IP Y
Sbjct: 417 PVSISLLIAACGLRNGDPCFFHDTIPPY 444
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 23.8 bits (49), Expect = 0.87
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -2
Query: 90 NFKKKYFWPNSY 55
+ K++Y+WPN Y
Sbjct: 151 SMKREYYWPNMY 162
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 23.4 bits (48), Expect = 1.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 123 NRNYIPGYTGHCPEYKY 173
++NY+ GY G P Y +
Sbjct: 374 HQNYVQGYQGEHPNYNH 390
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 23.4 bits (48), Expect = 1.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 123 NRNYIPGYTGHCPEYKY 173
++NY+ GY G P Y +
Sbjct: 322 HQNYVQGYQGEHPNYNH 338
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 23.0 bits (47), Expect = 1.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 111 SVSPNRNYIPGYTGHCPEYKYRIGDT 188
+VS R ++P G+ P Y R GDT
Sbjct: 386 AVSKARQFLPALPGYVPVY-IRPGDT 410
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 23.0 bits (47), Expect = 1.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 111 SVSPNRNYIPGYTGHCPEYKYRIGDT 188
+VS R ++P G+ P Y R GDT
Sbjct: 211 AVSKARQFLPALPGYVPVY-IRPGDT 235
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 4.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 180 GDTYGSXTHKXLLDPSVQHSERLV 251
GD Y S K LLD H + LV
Sbjct: 441 GDRYQSEREKALLDFKTGHRKVLV 464
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.4 bits (43), Expect = 4.7
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +2
Query: 278 QIYRPAQNEIDIVXARFRNGDPVYKHPMIPGY 373
QIY+P N ++ + N D H P Y
Sbjct: 348 QIYQPVTNLTNLTYPSYYNQDVSCTHYQNPEY 379
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 21.4 bits (43), Expect = 4.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 83 LKFTMALDLVSIAQPQLYSWVHGSLSRVQVSDR 181
L F + L S+ PQ+YS+ G R Q +R
Sbjct: 99 LGFGLGHPLESVPFPQVYSYFAGVNPRKQRRER 131
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,102
Number of Sequences: 336
Number of extensions: 2292
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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