Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1120
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78065-9|CAI79172.1|  273|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z78064-11|CAI79210.1|  273|Caenorhabditis elegans Hypothetical p...    28   3.3  
Z78015-5|CAB01432.2|  258|Caenorhabditis elegans Hypothetical pr...    27   7.6  
U43283-3|AAC69024.2|  880|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z92786-9|CAB07204.2|  687|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U41028-5|AAA82358.1|  185|Caenorhabditis elegans Hypothetical pr...    27   10.0 
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical...    27   10.0 
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical...    27   10.0 

>Z78065-9|CAI79172.1|  273|Caenorhabditis elegans Hypothetical
           protein F57B1.8 protein.
          Length = 273

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +1

Query: 16  IFDFLNSKLCFNYITI---RPKIFFFEIYNGSGFSQYRPTAIIFLGTRVIVPST 168
           I DF ++ + F+ +TI   R  +F F    G  F++Y  +  I +  +++VP T
Sbjct: 100 IIDFCHNSILFSNLTIAIHRMFVFLFAKATGKVFNKYVESLTIEIVQQILVPIT 153


>Z78064-11|CAI79210.1|  273|Caenorhabditis elegans Hypothetical
           protein F57B1.8 protein.
          Length = 273

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +1

Query: 16  IFDFLNSKLCFNYITI---RPKIFFFEIYNGSGFSQYRPTAIIFLGTRVIVPST 168
           I DF ++ + F+ +TI   R  +F F    G  F++Y  +  I +  +++VP T
Sbjct: 100 IIDFCHNSILFSNLTIAIHRMFVFLFAKATGKVFNKYVESLTIEIVQQILVPIT 153


>Z78015-5|CAB01432.2|  258|Caenorhabditis elegans Hypothetical
           protein R02D5.3 protein.
          Length = 258

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = +1

Query: 70  KIFFFEIYNGSGFSQYRPTAIIFLGTRVIVPSTSIGSAIRM 192
           KIF   I +     Q     +IFL TR  V  +SIGSAIR+
Sbjct: 125 KIFADVIRDRQNRGQCDDDILIFLSTRDQVVYSSIGSAIRI 165


>U43283-3|AAC69024.2|  880|Caenorhabditis elegans Hypothetical
           protein T25G12.6 protein.
          Length = 880

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +1

Query: 13  DIFDFLNSKLCFNYITIRPKIFFFEIYNGSGFSQYRPTAIIFLGTRVIVPSTS 171
           DIFD +NS LC    T  P I    I + SG +       + + T  I+PST+
Sbjct: 647 DIFDQINSLLC-TPSTKSPPITPTTIVSTSGATSSAAQTTVAVTTTQIMPSTT 698


>Z92786-9|CAB07204.2|  687|Caenorhabditis elegans Hypothetical
           protein F47H4.2 protein.
          Length = 687

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +1

Query: 7   IIDIFDFLNSKLCFNYITIRPKIFFFEIYNGS 102
           I  I  F   KLCF  ITIR  ++  EI+  S
Sbjct: 572 IESIGHFHKVKLCFRQITIRDLLYLKEIFMNS 603


>U41028-5|AAA82358.1|  185|Caenorhabditis elegans Hypothetical
           protein C25G6.1 protein.
          Length = 185

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
 Frame = -2

Query: 207 CVLXSHTYRRSDTCTRDNDPCTQEYNCGWAILTKSRAI--VNFKKKYFW 67
           CVL +  Y  + TC   ND C     C   I   S  +  V FK   F+
Sbjct: 46  CVLKNFRYSTAATCDNRNDQCQTTQYCVKIIDPMSPGVNYVTFKSDCFY 94


>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
            protein Y105E8A.26b protein.
          Length = 1133

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 337  AITETCVHDVYLVLCWTVDLXVIGRXIGSTSLSECCTLG 221
            AITE   H++Y+ +C   D   I R  G T LS     G
Sbjct: 1029 AITEGQEHEIYVKVCREGDSSPIDRSKGETLLSPLVMCG 1067


>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
            protein Y105E8A.26a protein.
          Length = 1172

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 337  AITETCVHDVYLVLCWTVDLXVIGRXIGSTSLSECCTLG 221
            AITE   H++Y+ +C   D   I R  G T LS     G
Sbjct: 1068 AITEGQEHEIYVKVCREGDSSPIDRSKGETLLSPLVMCG 1106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,446,116
Number of Sequences: 27780
Number of extensions: 205083
Number of successful extensions: 437
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)