Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1120
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    24   1.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   3.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   3.1  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   9.4  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   9.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.4  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   9.4  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   9.4  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   9.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.4  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +2

Query: 83  LKFTMALDLVSIAQPQLYSWVHGSLSRVQVSDRRYVW 193
           L   + LD V       + W   S+ R++  D  YVW
Sbjct: 112 LGLKVILDFVPNHSSHEHPWFKKSVQRIKPYDEYYVW 148


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 344 VYKHPMIPGYEGFSGHVP 397
           +YKH M+P  E FS + P
Sbjct: 85  IYKHGMLPRGELFSLYYP 102


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 344 VYKHPMIPGYEGFSGHVP 397
           +YKH M+P  E FS + P
Sbjct: 85  IYKHGMLPRGELFSLYYP 102


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -2

Query: 186 YRRSDTCTRDNDPCTQEYNCG 124
           ++ +D C R +D C    + G
Sbjct: 52  FKHTDACCRTHDMCPDVMSAG 72


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -2

Query: 186 YRRSDTCTRDNDPCTQEYNCG 124
           ++ +D C R +D C    + G
Sbjct: 57  FKHTDACCRTHDMCPDVMSAG 77


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/31 (25%), Positives = 13/31 (41%)
 Frame = +2

Query: 101 LDLVSIAQPQLYSWVHGSLSRVQVSDRRYVW 193
           LD V       + W   SL  ++  +  Y+W
Sbjct: 118 LDFVPNHTSDQHEWFQLSLKNIEPYNNYYIW 148


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +2

Query: 401 GFNXSAXSSKKLTNSALCDFFVEXSEXXXSTEW 499
           GF        + + S + D  V+ SE   S EW
Sbjct: 178 GFKVDLRHMDEKSGSNVVDVGVDLSEFYMSVEW 210


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +2

Query: 401 GFNXSAXSSKKLTNSALCDFFVEXSEXXXSTEW 499
           GF        + + S + D  V+ SE   S EW
Sbjct: 178 GFKVDLRHMDEKSGSNVVDVGVDLSEFYMSVEW 210


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -2

Query: 186 YRRSDTCTRDNDPCTQEYNCG 124
           ++ +D C R +D C    + G
Sbjct: 57  FKHTDACCRTHDMCPDVMSAG 77


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/31 (25%), Positives = 13/31 (41%)
 Frame = +2

Query: 101 LDLVSIAQPQLYSWVHGSLSRVQVSDRRYVW 193
           LD V       + W   SL  ++  +  Y+W
Sbjct: 118 LDFVPNHTSDQHEWFQLSLKNIEPYNNYYIW 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,418
Number of Sequences: 438
Number of extensions: 3191
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)