Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1113
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   1.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   2.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   2.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   2.4  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    23   2.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.2  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    22   5.5  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   9.7  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 498 QCTSARSFPPKHSHE 454
           QC   R  PP+H HE
Sbjct: 250 QCDDHRDRPPRHFHE 264


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 253 EYRRNGQIPPVSRITRDHHV 194
           EY +N  IPP      +HH+
Sbjct: 36  EYNQNSYIPPGGDFFGNHHI 55


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 253 EYRRNGQIPPVSRITRDHHV 194
           EY +N  IPP      +HH+
Sbjct: 36  EYNQNSYIPPGGDFFGNHHI 55


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 253 EYRRNGQIPPVSRITRDHHV 194
           EY +N  IPP      +HH+
Sbjct: 36  EYNQNSYIPPGGDFFGNHHI 55


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 253 EYRRNGQIPPVSRITRDHHV 194
           EY +N  IPP      +HH+
Sbjct: 36  EYNQNSYIPPGGDFFGNHHI 55


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +2

Query: 332 WIPNNCKIAVCDIP 373
           W+P++CK+   ++P
Sbjct: 493 WVPHSCKLTSKEVP 506


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 91  AFLHPWLCAADVARSSTVSSFNCT 162
           AF  PWL    +   +    F+CT
Sbjct: 16  AFSRPWLLQGHIRTHTGEKPFSCT 39


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 194 FWRRTXAAXARVQLKLDTVELLAT 123
           FW    A  ARV L + TV  + T
Sbjct: 89  FWLNRNATPARVALGVTTVLTMTT 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,236
Number of Sequences: 336
Number of extensions: 3184
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)