Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1113
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 267 6e-72
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 260 5e-70
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 260 5e-70
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 259 2e-69
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 258 2e-69
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 258 3e-69
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 136 1e-32
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 136 1e-32
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 124 8e-29
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 124 8e-29
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 124 8e-29
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 124 8e-29
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 124 8e-29
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 124 8e-29
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 124 8e-29
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 124 8e-29
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 119 2e-27
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 119 2e-27
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 117 7e-27
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 117 9e-27
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 117 9e-27
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 116 1e-26
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 116 2e-26
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 107 6e-24
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 31 1.0
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 31 1.0
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z70312-7|CAH04716.1| 263|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z70311-13|CAA94375.2| 263|Caenorhabditis elegans Hypothetical p... 28 5.6
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 28 5.6
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 28 5.6
AL024499-2|CAB54260.2| 242|Caenorhabditis elegans Hypothetical ... 28 5.6
AL024499-1|CAB54261.2| 295|Caenorhabditis elegans Hypothetical ... 28 5.6
U00066-4|AAM54165.2| 75|Caenorhabditis elegans Hypothetical pr... 28 7.4
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 27 9.8
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 267 bits (654), Expect = 6e-72
Identities = 129/195 (66%), Positives = 150/195 (76%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYR+LTVPELT M
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
FDAKNMM ACDPRHGRYLTVA +FRG K++ ++ N+QNK FVEWIPNN K AV
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDIPPRG+KMA+T + + + +S + + + A +HW DEMEFTEA
Sbjct: 354 CDIPPRGVKMAATFVGNSTAIQELFKR-ISEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 411
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDL+SEYQQYQ
Sbjct: 412 ESNMNDLVSEYQQYQ 426
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 260 bits (638), Expect = 5e-70
Identities = 127/195 (65%), Positives = 146/195 (74%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSR QQYRA+TVPELT
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQC 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
FDAKNMM ACDPRHGRYLT A IFRG K++ ++ NIQNK FV+WIPNN K AV
Sbjct: 294 FDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAV 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDIPPRGLKM++T + + + +S + + + A +HW DEMEFTEA
Sbjct: 354 CDIPPRGLKMSATFIGNSTAIQELFKR-ISEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 411
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDL+SEYQQYQ
Sbjct: 412 ESNMNDLVSEYQQYQ 426
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 260 bits (638), Expect = 5e-70
Identities = 127/195 (65%), Positives = 146/195 (74%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSR QQYRA+TVPELT
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQC 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
FDAKNMM ACDPRHGRYLT A IFRG K++ ++ NIQNK FV+WIPNN K AV
Sbjct: 294 FDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAV 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDIPPRGLKM++T + + + +S + + + A +HW DEMEFTEA
Sbjct: 354 CDIPPRGLKMSATFIGNSTAIQELFKR-ISEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 411
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDL+SEYQQYQ
Sbjct: 412 ESNMNDLVSEYQQYQ 426
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 259 bits (634), Expect = 2e-69
Identities = 125/195 (64%), Positives = 148/195 (75%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPL+++GAQ YRALTV ELT M
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
FDAKNMM ACDPRHGRYLTVA +FRG +++ ++ N+QNK FVEWIPNN K AV
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAV 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDIPPRGLKM++T + + + +S + + + A +HW DEMEFTEA
Sbjct: 354 CDIPPRGLKMSATFIGNSTAIQELFKR-ISEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 411
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDL+SEYQQYQ
Sbjct: 412 ESNMNDLVSEYQQYQ 426
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 258 bits (633), Expect = 2e-69
Identities = 126/195 (64%), Positives = 147/195 (75%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPL+++G Q YRALTV ELT M
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQAYRALTVAELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
FDAKNMM ACDPRHGRYLTVA +FRG +++ ++ N+QNK FVEWIPNN K AV
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAV 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDIPPRGLKMA+T + + + +S + + + A +HW DEMEFTEA
Sbjct: 354 CDIPPRGLKMAATFVGNSTAIQELFKR-ISEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 411
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDLISEYQQYQ
Sbjct: 412 ESNMNDLISEYQQYQ 426
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 258 bits (632), Expect = 3e-69
Identities = 126/195 (64%), Positives = 148/195 (75%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPL+++GAQ YRALTV ELT M
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
FDAKNMM ACDPRHGRYLTVA +FRG +++ ++ ++QNK FVEWIPNN K AV
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAV 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDIPPRGLKMA+T + + + +S + + + A +HW DEMEFTEA
Sbjct: 354 CDIPPRGLKMAATFVGNSTAIQELFKR-ISEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 411
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDLISEYQQYQ
Sbjct: 412 ESNMNDLISEYQQYQ 426
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 136 bits (330), Expect = 1e-32
Identities = 75/193 (38%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SGITT RF G L D+RKL N PRLHF+ FAP+ +G +A ++ +LT +
Sbjct: 235 SGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQV 292
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
DAKN+M C+ G++L+ A I+RG+ KK ++ +++N+ +E +P + V
Sbjct: 293 LDAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDV 351
Query: 362 CDIPPRGLKMASTSLVTRRPYR-PYSRGCLSSSWLCLGGKLLALVHW*XYDEMEFTEAES 538
CDIP RGLK ++T + + P R +S + L + A +HW +E EFT+AE+
Sbjct: 352 CDIPSRGLKTSATFIANSTAIQEPLKR--ISKQFAGL-FRRKAFLHWYTMEESEFTDAEN 408
Query: 539 NMNDLISEYQQYQ 577
+NDLISE+QQY+
Sbjct: 409 KVNDLISEFQQYE 421
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 136 bits (330), Expect = 1e-32
Identities = 75/193 (38%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SGITT RF G L D+RKL N PRLHF+ FAP+ +G +A ++ +LT +
Sbjct: 235 SGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQV 292
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
DAKN+M C+ G++L+ A I+RG+ KK ++ +++N+ +E +P + V
Sbjct: 293 LDAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDV 351
Query: 362 CDIPPRGLKMASTSLVTRRPYR-PYSRGCLSSSWLCLGGKLLALVHW*XYDEMEFTEAES 538
CDIP RGLK ++T + + P R +S + L + A +HW +E EFT+AE+
Sbjct: 352 CDIPSRGLKTSATFIANSTAIQEPLKR--ISKQFAGL-FRRKAFLHWYTMEESEFTDAEN 408
Query: 539 NMNDLISEYQQYQ 577
+NDLISE+QQY+
Sbjct: 409 KVNDLISEFQQYE 421
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 124 bits (298), Expect = 8e-29
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL+V ++T
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSC 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ N MV CDPRHG+Y+ V ++RG+ + K + + +A I+ K+ FV+W P K+ +
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ +W L K A VHW +E
Sbjct: 354 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEE 413
Query: 515 MEFTEAESNMNDLISEYQQ 571
EFTEA ++ L +Y++
Sbjct: 414 GEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 124 bits (298), Expect = 8e-29
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL+V ++T
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSC 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ N MV CDPRHG+Y+ V ++RG+ + K + + +A I+ K+ FV+W P K+ +
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ +W L K A VHW +E
Sbjct: 354 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEE 413
Query: 515 MEFTEAESNMNDLISEYQQ 571
EFTEA ++ L +Y++
Sbjct: 414 GEFTEAREDLAALEKDYEE 432
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 124 bits (298), Expect = 8e-29
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF F+P+ S + L+V E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMC 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ N MV CDPRHG+Y+ V +FRG+ + K + + +A I+ K+ FV+W P K+ +
Sbjct: 296 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 355
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ +W L K A VHW +E
Sbjct: 356 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA ++ L +Y++
Sbjct: 416 GEFSEAREDLAALEKDYEE 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 124 bits (298), Expect = 8e-29
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF F+P+ S + L+V E+T
Sbjct: 235 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMC 294
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ N MV CDPRHG+Y+ V +FRG+ + K + + +A I+ K+ FV+W P K+ +
Sbjct: 295 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 354
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ +W L K A VHW +E
Sbjct: 355 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 414
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA ++ L +Y++
Sbjct: 415 GEFSEAREDLAALEKDYEE 433
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 124 bits (298), Expect = 8e-29
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL+V ++T
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSC 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ N MV CDPRHG+Y+ V ++RG+ + K + + +A I+ K+ FV+W P K+ +
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ +W L K A VHW +E
Sbjct: 354 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEE 413
Query: 515 MEFTEAESNMNDLISEYQQ 571
EFTEA ++ L +Y++
Sbjct: 414 GEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 124 bits (298), Expect = 8e-29
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL+V ++T
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSC 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ N MV CDPRHG+Y+ V ++RG+ + K + + +A I+ K+ FV+W P K+ +
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ +W L K A VHW +E
Sbjct: 354 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEE 413
Query: 515 MEFTEAESNMNDLISEYQQ 571
EFTEA ++ L +Y++
Sbjct: 414 GEFTEAREDLAALEKDYEE 432
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 124 bits (298), Expect = 8e-29
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF F+P+ S + L+V E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMC 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ N MV CDPRHG+Y+ V +FRG+ + K + + +A I+ K+ FV+W P K+ +
Sbjct: 296 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 355
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ +W L K A VHW +E
Sbjct: 356 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA ++ L +Y++
Sbjct: 416 GEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 124 bits (298), Expect = 8e-29
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF F+P+ S + L+V E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMC 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ N MV CDPRHG+Y+ V +FRG+ + K + + +A I+ K+ FV+W P K+ +
Sbjct: 296 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 355
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ +W L K A VHW +E
Sbjct: 356 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA ++ L +Y++
Sbjct: 416 GEFSEAREDLAALEKDYEE 434
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 119 bits (287), Expect = 2e-27
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL+V ++T
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSC 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ N MV CDPR+G+Y+ V ++RG+ + K + + + I+ K+ FV+W P K+ +
Sbjct: 294 FEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGI 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ +W L K A VHW +E
Sbjct: 354 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEE 413
Query: 515 MEFTEAESNMNDLISEYQQ 571
EFTEA ++ L +Y++
Sbjct: 414 GEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 119 bits (287), Expect = 2e-27
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL+V ++T
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSC 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ N MV CDPR+G+Y+ V ++RG+ + K + + + I+ K+ FV+W P K+ +
Sbjct: 294 FEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGI 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ +W L K A VHW +E
Sbjct: 354 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEE 413
Query: 515 MEFTEAESNMNDLISEYQQ 571
EFTEA ++ L +Y++
Sbjct: 414 GEFTEAREDLAALEKDYEE 432
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 117 bits (282), Expect = 7e-27
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF + PL S ++ L+V E+T
Sbjct: 233 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLVAYNPLISSAHHEF--LSVDEITKSC 290
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+A N MV CDP+HG+Y+ V ++RG+ + K +++ + +I+ ++ FV+W P K+ +
Sbjct: 291 FEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGL 350
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ +W L K A VHW +E
Sbjct: 351 NYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEE 410
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA ++ L +Y++
Sbjct: 411 GEFSEAREDLAALEKDYEE 429
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 117 bits (281), Expect = 9e-27
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF +APL S + TV ++T
Sbjct: 242 SSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHAC 301
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ MV CDPR G+Y+ V ++RG+ + K + S +A ++ K+ FVEW P K+ +
Sbjct: 302 FEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGI 361
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + TR + ++ +W L K A VHW +E
Sbjct: 362 NYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 421
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA +M L +Y++
Sbjct: 422 GEFSEAREDMAALEKDYEE 440
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 117 bits (281), Expect = 9e-27
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF +APL S + TV ++T
Sbjct: 214 SSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHAC 273
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ MV CDPR G+Y+ V ++RG+ + K + S +A ++ K+ FVEW P K+ +
Sbjct: 274 FEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGI 333
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + TR + ++ +W L K A VHW +E
Sbjct: 334 NYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 393
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA +M L +Y++
Sbjct: 394 GEFSEAREDMAALEKDYEE 412
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 116 bits (280), Expect = 1e-26
Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S +T LRF G LN DL + N+VP+PR+HF +AP+ S + +TV E+T
Sbjct: 241 SSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKAYHEQMTVAEITQQC 300
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ MV CDPR G+Y+ ++RG+ + K + + +A+++ K+ FV+W P K+ +
Sbjct: 301 FEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGI 360
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + A S + R + ++ +W L K A VHW +E
Sbjct: 361 NYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 420
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA ++ L +Y++
Sbjct: 421 GEFSEAREDLAALEKDYEE 439
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 116 bits (278), Expect = 2e-26
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNVC 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ + MV CDPR+G+Y+ ++RG+ + K++ S ++ I+ K+ FV+W P K+ +
Sbjct: 296 FEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGI 355
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + + R + + +W L K A VHW +E
Sbjct: 356 NYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA +M L +Y++
Sbjct: 416 GEFSEAREDMAALEKDYEE 434
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 107 bits (258), Expect = 6e-24
Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V ++T
Sbjct: 239 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQDITHMC 298
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ N MV CDP G+Y+ V ++RG+ + K + + +++++ K+ FV+W P K+ +
Sbjct: 299 FEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGI 358
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
P ++ + V R + ++ +W L K A VHW +E
Sbjct: 359 NYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEE 418
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF EA ++ L +Y +
Sbjct: 419 GEFMEARDDLAALEKDYAE 437
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +2
Query: 11 TTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXMFDA 190
T RF + +R L ++ PFP +HF +P+ R +V ++T +
Sbjct: 242 TAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKP 299
Query: 191 KNMMVACDPR 220
+MMV+ R
Sbjct: 300 TSMMVSTASR 309
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +2
Query: 11 TTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXMFDA 190
T RF + +R L ++ PFP +HF +P+ R +V ++T +
Sbjct: 242 TAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKP 299
Query: 191 KNMMVACDPR 220
+MMV+ R
Sbjct: 300 TSMMVSTASR 309
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/81 (27%), Positives = 33/81 (40%)
Frame = -3
Query: 311 FCSEYSPVCSSTSFIDIRP*ISSQRSNTSRVEDHTRPSCFWRRTXAAXARVQLKLDTVEL 132
+CS + S+T+F+ +SS SN S T+ + A A L V
Sbjct: 155 YCSIIANCSSTTTFLSTTTPVSSTTSNISLTSSSTQS----YSSSTAGATSSLFTIKVTQ 210
Query: 131 LATSAAQSQGCRNAGAETAPC 69
T+A QG +G+ T C
Sbjct: 211 STTAAGNGQGGSGSGSATTTC 231
>Z70312-7|CAH04716.1| 263|Caenorhabditis elegans Hypothetical
protein T25B9.3a protein.
Length = 263
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 488 VQEAFRLNIATNCSDTLLNMVCMAVVLPMKSKPF*DPSEV 369
V+ +RLN A + +D L M +V+ K P DP ++
Sbjct: 91 VRVEYRLNFADDAADNALRMTKQEMVVKTKKTPRDDPKKI 130
>Z70311-13|CAA94375.2| 263|Caenorhabditis elegans Hypothetical
protein T25B9.3a protein.
Length = 263
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 488 VQEAFRLNIATNCSDTLLNMVCMAVVLPMKSKPF*DPSEV 369
V+ +RLN A + +D L M +V+ K P DP ++
Sbjct: 91 VRVEYRLNFADDAADNALRMTKQEMVVKTKKTPRDDPKKI 130
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 278 LTSKLANIQNKKQHVFVEWIPNNCKIAVCDI 370
LTS L +++NK++ WIP ++ C+I
Sbjct: 2814 LTSGLEDVRNKRREEEGAWIPRTVDVSRCEI 2844
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 278 LTSKLANIQNKKQHVFVEWIPNNCKIAVCDI 370
LTS L +++NK++ WIP ++ C+I
Sbjct: 2819 LTSGLEDVRNKRREEEGAWIPRTVDVSRCEI 2849
>AL024499-2|CAB54260.2| 242|Caenorhabditis elegans Hypothetical
protein H38K22.2b protein.
Length = 242
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 152 KLDTVELLATSAAQSQGCRNAGAETAPCSQPTSSDQRSAV 33
K + L A + A+S CRN ETA C QRS +
Sbjct: 104 KFHELYLFAFNYAKSAACRNLDLETAICCWDVLFGQRSTI 143
>AL024499-1|CAB54261.2| 295|Caenorhabditis elegans Hypothetical
protein H38K22.2a protein.
Length = 295
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 152 KLDTVELLATSAAQSQGCRNAGAETAPCSQPTSSDQRSAV 33
K + L A + A+S CRN ETA C QRS +
Sbjct: 157 KFHELYLFAFNYAKSAACRNLDLETAICCWDVLFGQRSTI 196
>U00066-4|AAM54165.2| 75|Caenorhabditis elegans Hypothetical
protein R12B2.7 protein.
Length = 75
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 38 LNADLRKLAVNMVPFPRLHFY 100
LN L L++N FP+LHFY
Sbjct: 41 LNDKLISLSINAFSFPKLHFY 61
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 284 SKLANIQNKKQHVFVEWIPNNCKIAVC-DIPPRGLKMASTSLV 409
SK+A QN + VF ++ NC+ VC D+ RG+ + + ++V
Sbjct: 312 SKMA--QNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVV 352
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,953,178
Number of Sequences: 27780
Number of extensions: 301686
Number of successful extensions: 983
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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