Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1113
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 250 7e-67
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 248 4e-66
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 248 4e-66
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 248 4e-66
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 246 8e-66
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 244 3e-65
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 243 1e-64
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 241 3e-64
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 241 4e-64
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 116 2e-26
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 114 6e-26
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 114 6e-26
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 106 2e-23
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 106 2e-23
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 106 2e-23
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 103 9e-23
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 75 3e-14
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 74 8e-14
At1g70400.1 68414.m08098 hypothetical protein similar to U4/U6 s... 29 3.0
At3g21720.1 68416.m02740 isocitrate lyase, putative similar to i... 29 3.9
At5g24740.1 68418.m02920 expressed protein 28 5.2
At3g44990.1 68416.m04847 xyloglucan:xyloglucosyl transferase, pu... 28 5.2
At3g21420.1 68416.m02703 oxidoreductase, 2OG-Fe(II) oxygenase fa... 28 5.2
At2g36870.1 68415.m04520 xyloglucan:xyloglucosyl transferase, pu... 28 5.2
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 250 bits (612), Expect = 7e-67
Identities = 122/195 (62%), Positives = 145/195 (74%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT M
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
+DAKNMM A DPRHGRYLT + +FRG+ K++ ++ N+QNK FVEWIPNN K V
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTV 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDIPP GLKMAST + + R +S + + + A +HW DEMEFTEA
Sbjct: 354 CDIPPTGLKMASTFIGNSTSIQEMFRR-VSEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 411
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDL+SEYQQYQ
Sbjct: 412 ESNMNDLVSEYQQYQ 426
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 248 bits (606), Expect = 4e-66
Identities = 120/195 (61%), Positives = 145/195 (74%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYR+LTVPELT M
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
+D+KNMM A DPRHGRYLT + +FRG+ K++ ++ N+QNK FVEWIPNN K V
Sbjct: 294 WDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTV 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDIPP GLKMAST + + R +S + + + A +HW DEMEFTEA
Sbjct: 354 CDIPPTGLKMASTFIGNSTSIQEMFRR-VSEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 411
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDL+SEYQQYQ
Sbjct: 412 ESNMNDLVSEYQQYQ 426
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 248 bits (606), Expect = 4e-66
Identities = 120/195 (61%), Positives = 145/195 (74%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYR+LTVPELT M
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
+D+KNMM A DPRHGRYLT + +FRG+ K++ ++ N+QNK FVEWIPNN K V
Sbjct: 294 WDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTV 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDIPP GLKMAST + + R +S + + + A +HW DEMEFTEA
Sbjct: 354 CDIPPTGLKMASTFIGNSTSIQEMFRR-VSEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 411
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDL+SEYQQYQ
Sbjct: 412 ESNMNDLVSEYQQYQ 426
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 248 bits (606), Expect = 4e-66
Identities = 121/195 (62%), Positives = 144/195 (73%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYR LTVPELT M
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
+DAKNMM A DPRHGRYLT + +FRG+ K++ ++ N+QNK FVEWIPNN K V
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTV 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDIPP GLKMAST + + R +S + + + A +HW DEMEFTEA
Sbjct: 354 CDIPPTGLKMASTFIGNSTSIQEMFRR-VSEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 411
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDL+SEYQQYQ
Sbjct: 412 ESNMNDLVSEYQQYQ 426
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 246 bits (603), Expect = 8e-66
Identities = 120/195 (61%), Positives = 145/195 (74%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT M
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
+D+KNMM A DPRHGRYLT + +FRG+ K++ ++ N+QNK FVEWIPNN K +V
Sbjct: 294 WDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDI PRGL MAST + + R +S + + + A +HW DEMEFTEA
Sbjct: 354 CDIAPRGLSMASTFIGNSTSIQEMFRR-VSEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 411
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDL+SEYQQYQ
Sbjct: 412 ESNMNDLVSEYQQYQ 426
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 244 bits (598), Expect = 3e-65
Identities = 119/195 (61%), Positives = 145/195 (74%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY AL+VPELT M
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
+DAKNMM A DPRHGRYLT + +FRG+ K++ ++ NIQNK FVEWIPNN K +V
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSV 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDI P+GLKMAST + + R +S + + + A +HW DEMEFTEA
Sbjct: 354 CDIAPKGLKMASTFIGNSTSIQEMFRR-VSEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 411
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDL++EYQQYQ
Sbjct: 412 ESNMNDLVAEYQQYQ 426
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 243 bits (594), Expect = 1e-64
Identities = 118/195 (60%), Positives = 144/195 (73%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY AL+VPELT M
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
+DAKNMM A DPRHGRYLT + +FRG+ K++ ++ N+QNK FVEWIPNN K +V
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSV 353
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDI P GLKMAST + + R +S + + + A +HW DEMEFTEA
Sbjct: 354 CDIAPTGLKMASTFIGNSTSIQEMFRR-VSEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 411
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDL++EYQQYQ
Sbjct: 412 ESNMNDLVAEYQQYQ 426
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 241 bits (590), Expect = 3e-64
Identities = 118/195 (60%), Positives = 145/195 (74%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+T LRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY +LTVPELT M
Sbjct: 235 SGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 294
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
+D+KNMM A DPRHGRYLT + IFRG+ K++ ++ NIQNK FVEWIPNN K +V
Sbjct: 295 WDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSV 354
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDIPP+GLKMA+T + + R +S + + + A +HW DEMEFTEA
Sbjct: 355 CDIPPKGLKMAATFVGNSTSIQEMFRR-VSEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 412
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDL++EYQQYQ
Sbjct: 413 ESNMNDLVAEYQQYQ 427
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 241 bits (589), Expect = 4e-64
Identities = 118/195 (60%), Positives = 144/195 (73%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
SG+T LRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY +LTVPELT M
Sbjct: 235 SGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 294
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
+DAKNMM A DPRHGRYLT + +FRG+ K++ ++ N+QNK FVEWIPNN K +V
Sbjct: 295 WDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSV 354
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*XYDEMEFTEA 532
CDIPP G+KMAST + + R +S + + + A +HW DEMEFTEA
Sbjct: 355 CDIPPTGIKMASTFVGNSTSIQEMFRR-VSEQFTAM-FRRKAFLHWYTGEGMDEMEFTEA 412
Query: 533 ESNMNDLISEYQQYQ 577
ESNMNDL+SEYQQYQ
Sbjct: 413 ESNMNDLVSEYQQYQ 427
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 116 bits (278), Expect = 2e-26
Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S +TT LRF G +N D+ + N+VP+PR+HF +AP+ S + +VPE+T +
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSV 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ NMM CDPRHG+Y+ ++RG+ + K + + +A I+ K+ FV+W P K +
Sbjct: 296 FEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGI 355
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ + + K A VHW +E
Sbjct: 356 NYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEE 415
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA ++ L +Y++
Sbjct: 416 GEFSEAREDLAALEKDYEE 434
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 114 bits (274), Expect = 6e-26
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S +TT LRF G +N D+ + N+VP+PR+HF +AP+ S + L+VPE+T +
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAV 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ +MM CDPRHG+Y+ ++RG+ + K + + + I+ K+ FV+W P K +
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGI 355
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ + + K A VHW +E
Sbjct: 356 NYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 415
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA ++ L +Y++
Sbjct: 416 GEFSEAREDLAALEKDYEE 434
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 114 bits (274), Expect = 6e-26
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S +TT LRF G +N D+ + N+VP+PR+HF +AP+ S + L+VPE+T +
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAV 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ +MM CDPRHG+Y+ ++RG+ + K + + + I+ K+ FV+W P K +
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGI 355
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ + + K A VHW +E
Sbjct: 356 NYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 415
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA ++ L +Y++
Sbjct: 416 GEFSEAREDLAALEKDYEE 434
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 106 bits (254), Expect = 2e-23
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ +MM CDPRHG+Y+ ++RG+ + K + + + I+ K+ FV+W P K +
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGI 355
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ + + K A VHW +E
Sbjct: 356 NYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 415
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA ++ L +Y++
Sbjct: 416 GEFSEAREDLAALEKDYEE 434
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 106 bits (254), Expect = 2e-23
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ +MM CDPRHG+Y+ ++RG+ + K + + + I+ K+ FV+W P K +
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGI 355
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ + + K A VHW +E
Sbjct: 356 NYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 415
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA ++ L +Y++
Sbjct: 416 GEFSEAREDLAALEKDYEE 434
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 106 bits (254), Expect = 2e-23
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ +MM CDPRHG+Y+ ++RG+ + K + + + I+ K+ FV+W P K +
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGI 355
Query: 362 CDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKL------LALVHW---*XYDE 514
PP + + V R + ++ + + K A VHW +E
Sbjct: 356 NYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 415
Query: 515 MEFTEAESNMNDLISEYQQ 571
EF+EA ++ L +Y++
Sbjct: 416 GEFSEAREDLAALEKDYEE 434
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 103 bits (248), Expect = 9e-23
Identities = 45/125 (36%), Positives = 71/125 (56%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLXM 181
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPNNCKIAV 361
F+ +MM CDPRHG+Y+ ++RG+ + K + + + I+ K+ FV+W P K +
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGI 355
Query: 362 CDIPP 376
PP
Sbjct: 356 NYQPP 360
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 75.4 bits (177), Expect = 3e-14
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLT-SRGAQQYRALTVPELTLX 178
S TT LR+PG +N DL L +++P PR HF G+ PLT R A R TV ++
Sbjct: 237 SASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRR 296
Query: 179 MFDAKNMMVACDPRH-----GRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPN 343
+ KN+MV+ R+ +Y+++ I +GE ++ L I+ +K F+EW P
Sbjct: 297 LLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA 356
Query: 344 NCKIAVCDIPP 376
+ ++A+ P
Sbjct: 357 SIQVALSKKSP 367
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 74.1 bits (174), Expect = 8e-14
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLT-SRGAQQYRALTVPELTLX 178
S TT LR+PG +N DL L +++P PR HF G+ PLT R A R TV ++
Sbjct: 237 SASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRR 296
Query: 179 MFDAKNMMVACDPRH-----GRYLTVATIFRGECL*KKLTSKLANIQNKKQHVFVEWIPN 343
+ KN+MV+ R+ +Y+++ I +GE ++ L I+ +K F++W P
Sbjct: 297 LLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPA 356
Query: 344 NCKIAVCDIPP 376
+ ++A+ P
Sbjct: 357 SIQVALSKKSP 367
>At1g70400.1 68414.m08098 hypothetical protein similar to U4/U6
snRNP-associated 61 kDa protein [Homo sapiens]
GI:18249847
Length = 168
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = -2
Query: 453 LLRHPLEYGLYGRRVTNEVEAILRPLGGMSHTAILQLLGIHSTNT 319
L+ HP++Y +R+ NE++ L L G+ +A++ +L + + T
Sbjct: 81 LVPHPIDYARVVKRIGNEMDLKLVDLEGLLPSAMIMVLLVTALTT 125
>At3g21720.1 68416.m02740 isocitrate lyase, putative similar to
isocitrate lyase GI:167144 from [Brassica napus]
Length = 576
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 265 TFAPEYRRNGQIPPVSRITRDHHVFGVE 182
TFA +Y R G + V RI R+ GV+
Sbjct: 485 TFAKDYARRGMLAYVERIQREERTHGVD 512
>At5g24740.1 68418.m02920 expressed protein
Length = 3306
Score = 28.3 bits (60), Expect = 5.2
Identities = 24/71 (33%), Positives = 31/71 (43%)
Frame = -1
Query: 526 RELHFIIPSPVYQCKKLSA*T*PRTAQTPS*IWSVWPSCYQ*SRSHFKTPRRYVTHGNLA 347
RE+ +P +Y C T +T I+SV PSCY HF R+ V G L
Sbjct: 2165 REVLIFVPFLLYNCTGTPLIVSDCTNETKG-IYSVIPSCYNLIEQHFVQSRK-VGLGILT 2222
Query: 346 VIGYPLDKYVL 314
LDK V+
Sbjct: 2223 SEKDLLDKAVM 2233
>At3g44990.1 68416.m04847 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative
Length = 293
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +2
Query: 317 HVFVEWIPNNCKIAVCDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLA 487
H + W PN V D+P R + ++ RP Y +S W G++ A
Sbjct: 163 HYAILWNPNQIVFFVDDVPIRTYNRKNEAIFPTRPMWVYGSIWDASDWATENGRIKA 219
>At3g21420.1 68416.m02703 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to SP|Q9ZWQ9 Flavonol synthase
(EC 1.14.11.-) {Citrus unshiu}; contains Pfam profile
PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family
Length = 364
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 103 GVEMQARKRHHVHSQLPQISVQLSRKP 23
GV + + K HH+H Q+P I + KP
Sbjct: 40 GVVVSSLKTHHLHHQIPVIDLSKLSKP 66
>At2g36870.1 68415.m04520 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
cellulase (xyloglucan endo-transglycosylase) GI:311835
from [Tropaeolum majus]
Length = 299
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = +2
Query: 317 HVFVEWIPNNCKIAVCDIPPRGLKMASTSLVTRRPYRPYSRGCLSSSWLCLGGKLLA 487
H + W P V DIP R S S RP Y +SSW GK A
Sbjct: 167 HYAILWSPREIIFLVDDIPIRRYPKKSASTFPLRPMWLYGSIWDASSWATEDGKYKA 223
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,994,428
Number of Sequences: 28952
Number of extensions: 277459
Number of successful extensions: 752
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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