Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1107
         (419 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0W9K7 Cluster: TPR repeat; n=1; Geobacter lovleyi SZ|R...    32   4.1  
UniRef50_Q7SEI9 Cluster: Predicted protein; n=1; Neurospora cras...    32   5.4  
UniRef50_Q2WB57 Cluster: SAM-dependent methyltransferase; n=1; M...    31   7.2  
UniRef50_Q8PS79 Cluster: Putative uncharacterized protein; n=1; ...    31   7.2  

>UniRef50_A0W9K7 Cluster: TPR repeat; n=1; Geobacter lovleyi SZ|Rep:
           TPR repeat - Geobacter lovleyi SZ
          Length = 412

 Score = 32.3 bits (70), Expect = 4.1
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -1

Query: 263 IAETIWSLRSVPPFITEPAARSTVFFRTLTSVDVGNVAAQCWASARY 123
           +  T+ ++ +V P++T PAAR   +   L   +V      CW+  RY
Sbjct: 232 LGSTLETIPAVVPYLTTPAARLPFWQSVLPGDNVSKRIGLCWSGKRY 278


>UniRef50_Q7SEI9 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 609

 Score = 31.9 bits (69), Expect = 5.4
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = -1

Query: 293 HCSACQFKGGIAETIWSLRSVPPFITEPAARSTVFFRTLTS---VDVGNVAAQCWASARY 123
           H +  +FKG + +T+ S   +PP +  P +   VF   + S   ++  N A   WA    
Sbjct: 466 HGTNIRFKGNLFQTVRSTPPMPPNVVAPESLGPVFIEEVMSRNEIEKYNKARWGWALVER 525

Query: 122 STMRIQK*PGRKFYST 75
             +R +     +FY T
Sbjct: 526 DAVRTEVDTLGRFYVT 541


>UniRef50_Q2WB57 Cluster: SAM-dependent methyltransferase; n=1;
           Magnetospirillum magneticum AMB-1|Rep: SAM-dependent
           methyltransferase - Magnetospirillum magneticum (strain
           AMB-1 / ATCC 700264)
          Length = 288

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -1

Query: 320 GFSVSPHRYHCSACQFKGGIAETIWSLRSVPPFITEPAARSTVFFR 183
           G + S   Y C++C    G A  +W  R V P   EP   S  FFR
Sbjct: 16  GLTSSGDGYACTSCHRHFGKANGVWDFR-VEPAAAEPPLYSDPFFR 60


>UniRef50_Q8PS79 Cluster: Putative uncharacterized protein; n=1;
           Methanosarcina mazei|Rep: Putative uncharacterized
           protein - Methanosarcina mazei (Methanosarcina frisia)
          Length = 626

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 18/48 (37%), Positives = 21/48 (43%)
 Frame = -1

Query: 236 SVPPFITEPAARSTVFFRTLTSVDVGNVAAQCWASARYSTMRIQK*PG 93
           SVP   + PA         LTSV     A  CWA A YS++     PG
Sbjct: 57  SVPKAASAPAYYDLRALNRLTSVKDQGTAGTCWAFASYSSLESYLKPG 104


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,237,863
Number of Sequences: 1657284
Number of extensions: 8690479
Number of successful extensions: 17779
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17777
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)