Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1104
(439 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129; Eukar... 98 6e-20
UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emerice... 90 2e-17
UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza s... 89 4e-17
UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1; Acyrtho... 88 7e-17
UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3; Magno... 85 6e-16
UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2; Platyhe... 80 2e-14
UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1; Dictyos... 76 3e-13
UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4; Apicomp... 71 1e-11
UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13; Saccha... 70 3e-11
UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila melanogaster|... 67 2e-10
UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10; Trypan... 65 7e-10
UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5; Plasmod... 61 1e-08
UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n... 56 4e-07
UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=... 55 8e-07
UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1; Tetrahy... 54 1e-06
UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramec... 53 3e-06
UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lambl... 50 2e-05
UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157, w... 44 0.002
UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3; ... 42 0.004
UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiell... 36 0.29
UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria g... 35 0.87
UniRef50_Q0DBH2 Cluster: Os06g0565000 protein; n=3; Oryza sativa... 34 1.2
UniRef50_UPI0001555481 Cluster: PREDICTED: similar to structural... 33 2.7
UniRef50_Q3W1D8 Cluster: Catalytic domain of components of vario... 33 2.7
UniRef50_A7PNI8 Cluster: Chromosome chr1 scaffold_22, whole geno... 33 3.5
UniRef50_Q3SE69 Cluster: Protein containing mutated RNA-dependen... 33 3.5
UniRef50_A2E257 Cluster: Ribosomal protein L7Ae, putative; n=5; ... 33 3.5
UniRef50_UPI00015609DE Cluster: PREDICTED: similar to family wit... 32 4.7
UniRef50_Q08402 Cluster: E3 protein; n=1; Bacillus phage SPO1|Re... 32 4.7
UniRef50_Q8GZ45 Cluster: Probable threonyl-tRNA synthetase, cyto... 32 6.2
UniRef50_A3S4U4 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
UniRef50_Q6ZDB7 Cluster: Putative pentatricopeptide (PPR) repeat... 31 8.1
>UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129;
Eukaryota|Rep: 40S ribosomal protein S12 - Homo sapiens
(Human)
Length = 132
Score = 98.3 bits (234), Expect = 6e-20
Identities = 51/98 (52%), Positives = 62/98 (63%)
Frame = +1
Query: 55 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLV 234
I +G MDVN ALQEVLKTALIH GL G+ E AKALDKRQA LCV A NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65
Query: 235 QALCNEHRFHWSRLTTTKSLENGLVSARLTRMARQGKL 348
+AL EH+ + ++ K L + ++ R K+
Sbjct: 66 EALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKV 103
Score = 94.3 bits (224), Expect = 1e-18
Identities = 38/57 (66%), Positives = 49/57 (85%)
Frame = +3
Query: 255 QIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLXDYLK 425
QI L+KVD+NKKLGEW GLCKID++G RK+VGCSCVV+KD+G+E+ A DV+ +Y K
Sbjct: 73 QINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
>UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emericella
nidulans|Rep: 40S ribosomal protein S12 - Emericella
nidulans (Aspergillus nidulans)
Length = 183
Score = 89.8 bits (213), Expect = 2e-17
Identities = 49/92 (53%), Positives = 60/92 (65%)
Frame = +1
Query: 19 MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLA 198
+A EVEVP +G M V AL+ VL+ ALIH GL GL E AKALD+RQA +CVL
Sbjct: 13 VAAEEVEVPAESG-AGGQMSVLDALKGVLRIALIHDGLARGLREAAKALDRRQAHMCVLN 71
Query: 199 ENCDEAAYKKLVQALCNEHRFHWSRLTTTKSL 294
E C+E AYKKLV ALC+EH+ ++ K L
Sbjct: 72 EGCEEEAYKKLVVALCSEHKIPLIKVPDGKML 103
Score = 50.4 bits (115), Expect(2) = 5e-10
Identities = 19/38 (50%), Positives = 30/38 (78%)
Frame = +3
Query: 315 KIDKDGKARKIVGCSCVVIKDFGEETPALDVLXDYLKS 428
++D++G ARK+V CSCVV+KD+GEE+ VL +Y ++
Sbjct: 144 QLDREGNARKVVNCSCVVVKDWGEESQERSVLLNYFQT 181
Score = 35.1 bits (77), Expect(2) = 5e-10
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 255 QIPLVKVDNNKKLGEWAGLC 314
+IPL+KV + K LGEW GLC
Sbjct: 91 KIPLIKVPDGKMLGEWVGLC 110
>UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza
sativa|Rep: 40S ribosomal protein S12 - Oryza sativa
subsp. indica (Rice)
Length = 156
Score = 89.0 bits (211), Expect = 4e-17
Identities = 44/90 (48%), Positives = 58/90 (64%)
Frame = +1
Query: 25 DVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAEN 204
+ +E P P+L G MD+ ALQ V+K + H GLV GL E AKA++K A LCVLAE+
Sbjct: 4 ETPIETPAAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 205 CDEAAYKKLVQALCNEHRFHWSRLTTTKSL 294
CD+ Y KLV+ALC EH H + + K+L
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTL 92
Score = 71.3 bits (167), Expect = 8e-12
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 18/75 (24%)
Frame = +3
Query: 258 IPLVKVDNNKKLGEWAGL------------------CKIDKDGKARKIVGCSCVVIKDFG 383
+ LV V + K LGEWAGL CKID +GKARK+VGCSCVV+KD+G
Sbjct: 81 VHLVTVPSAKTLGEWAGLYEKPSCPGFNNTYCHSQLCKIDSEGKARKVVGCSCVVVKDYG 140
Query: 384 EETPALDVLXDYLKS 428
EE+ L+++ DY+KS
Sbjct: 141 EESEGLNIVQDYVKS 155
>UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1;
Acyrthosiphon pisum|Rep: 40S ribosomal protein S12 -
Acyrthosiphon pisum (Pea aphid)
Length = 136
Score = 88.2 bits (209), Expect = 7e-17
Identities = 36/67 (53%), Positives = 49/67 (73%)
Frame = +3
Query: 234 SGSVQRTQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLX 413
+G PL++VD+NK LGEW+GLCK D +G+ARK+VGCSCVV+K FG++T LD L
Sbjct: 68 TGLCAENSTPLIEVDSNKTLGEWSGLCKYDNNGQARKVVGCSCVVVKHFGDDTQELDTLL 127
Query: 414 DYLKSSS 434
+ LK +
Sbjct: 128 EILKKKN 134
Score = 79.4 bits (187), Expect = 3e-14
Identities = 42/92 (45%), Positives = 58/92 (63%)
Frame = +1
Query: 19 MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLA 198
M+DVE V G + ++ L+EVLK A ++G L+HG+HE KAL+K+ VLCVLA
Sbjct: 1 MSDVEDAVEV-----GEHGEMYNLLKEVLKNAQVNGSLLHGIHEGTKALEKKLGVLCVLA 55
Query: 199 ENCDEAAYKKLVQALCNEHRFHWSRLTTTKSL 294
NC+EA YKKLV LC E+ + + K+L
Sbjct: 56 NNCEEAMYKKLVTGLCAENSTPLIEVDSNKTL 87
>UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3;
Magnoliophyta|Rep: 40S ribosomal protein S12-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 85.0 bits (201), Expect = 6e-16
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = +3
Query: 258 IPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLXDYLKSS 431
I L+ V + K LGEWAGLCKID +G ARK+VGCSC+VIKDFGEET AL+++ +L S+
Sbjct: 87 IKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTALNIVKKHLDSN 144
Score = 75.4 bits (177), Expect = 5e-13
Identities = 34/75 (45%), Positives = 52/75 (69%)
Frame = +1
Query: 70 NMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLVQALCN 249
+MDV+ AL+ ++ + +GG+V GLHE AK ++KR A LCVLAE+C++ Y KLV+ALC
Sbjct: 24 DMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALCA 83
Query: 250 EHRFHWSRLTTTKSL 294
+H + + K+L
Sbjct: 84 DHSIKLLTVPSAKTL 98
>UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2;
Platyhelminthes|Rep: 40S ribosomal protein S12 -
Schistosoma japonicum (Blood fluke)
Length = 131
Score = 79.8 bits (188), Expect = 2e-14
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = +3
Query: 258 IPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLXD 416
IPLVKV +NKKLGEW+GLCK DK+GKARK+V SC+V+ D GEE+ L L +
Sbjct: 68 IPLVKVPDNKKLGEWSGLCKYDKEGKARKVVSASCIVVTDIGEESYGLKYLVE 120
Score = 70.9 bits (166), Expect = 1e-11
Identities = 32/74 (43%), Positives = 49/74 (66%)
Frame = +1
Query: 73 MDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLVQALCNE 252
MD++ A+Q+VLK A+ G+ GL++ K +++R VLC LA+NC+E AY L++ALCNE
Sbjct: 6 MDLDSAVQQVLKNAVKCRGICRGLNQCTKLIEQRGVVLCFLADNCNEKAYTTLIEALCNE 65
Query: 253 HRFHWSRLTTTKSL 294
H ++ K L
Sbjct: 66 HGIPLVKVPDNKKL 79
>UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S12 - Dictyostelium discoideum AX4
Length = 136
Score = 76.2 bits (179), Expect = 3e-13
Identities = 45/112 (40%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Frame = +1
Query: 52 PILSGN----NMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAA 219
P+++ N N D VALQ+V+K +L G+ GLHE KALDKR A LCVLA NCDE
Sbjct: 6 PVIAANPLEKNTDPMVALQKVIKESLAVQGVARGLHETVKALDKRTARLCVLASNCDEPN 65
Query: 220 YKKLVQALCNEHRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAAPVLSSK 375
+ +LV+AL EH + K+L +L + K+ A L K
Sbjct: 66 FVRLVKALATEHNIPLIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVIK 117
Score = 74.1 bits (174), Expect = 1e-12
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +3
Query: 258 IPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLXDYL 422
IPL++V +NK LGEWAGLCK+DKD ARK+V CS +VIK FG+E+ L +Y+
Sbjct: 79 IPLIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVIKTFGKESDDYKFLMEYI 133
>UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4;
Apicomplexa|Rep: 40S ribosomal protein S12 -
Cryptosporidium hominis
Length = 143
Score = 70.9 bits (166), Expect = 1e-11
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +1
Query: 19 MADVEVEVPTNPILSGNNM--DVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCV 192
M+DVE++ + + D+ A++ VLK + + GGL+ GL+E ALD ++A +C
Sbjct: 1 MSDVEIDQEGTQVQVEQEVVNDLTTAIRYVLKNSFVRGGLLRGLNEVVLALDSKKAQVCF 60
Query: 193 LAENCDEAAYKKLVQALCNEHRFHWSRLTTTKSLENGLVSARLTRMARQG 342
LAE+C+E YK+LV+ALC E + +K L A L ++ R+G
Sbjct: 61 LAESCEEDCYKQLVEALCRERGIPLIMVPDSKELGE---MAGLCKVDREG 107
Score = 61.3 bits (142), Expect = 9e-09
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = +3
Query: 258 IPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLXDYL 422
IPL+ V ++K+LGE AGLCK+D++G RK+VG + V I D+G E+ A L ++
Sbjct: 83 IPLIMVPDSKELGEMAGLCKVDREGNPRKVVGAASVAIVDYGVESEAYHYLQKHI 137
>UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13;
Saccharomycetales|Rep: 40S ribosomal protein S12 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 143
Score = 69.7 bits (163), Expect = 3e-11
Identities = 29/55 (52%), Positives = 44/55 (80%)
Frame = +3
Query: 255 QIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLXDY 419
++PL+KV + K+LGEWAGL KID++G ARK+VG S VV+K++G ET L ++ ++
Sbjct: 85 KVPLIKVADAKQLGEWAGLGKIDREGNARKVVGASVVVVKNWGAETDELSMIMEH 139
Score = 58.4 bits (135), Expect = 6e-08
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
Frame = +1
Query: 19 MADVE--VEVPTNPILSGN-NMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLC 189
M+DVE VEV ++ + + AL+ VL+TAL+H GL GL E KAL + +A+L
Sbjct: 1 MSDVEEVVEVQEETVVEQTAEVTIEDALKVVLRTALVHDGLARGLRESTKALTRGEALLV 60
Query: 190 VLAENCDEAAYKKLVQALCN--EHRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAAPV 363
VL + EA KLV+ L N E++ ++ K L ++ R K+ A V
Sbjct: 61 VLVSSVTEANIIKLVEGLANDPENKVPLIKVADAKQLGEWAGLGKIDREGNARKVVGASV 120
Query: 364 LSSK 375
+ K
Sbjct: 121 VVVK 124
>UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila
melanogaster|Rep: RH29995p - Drosophila melanogaster
(Fruit fly)
Length = 127
Score = 66.9 bits (156), Expect = 2e-10
Identities = 33/53 (62%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Frame = +1
Query: 16 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEXAKALDK 171
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GL+HG+H+ KALDK
Sbjct: 16 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLIHGIHQACKALDK 67
>UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10;
Trypanosomatidae|Rep: 40S ribosomal protein S12 -
Trypanosoma brucei brucei
Length = 144
Score = 64.9 bits (151), Expect = 7e-10
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = +3
Query: 246 QRTQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLXDYLK 425
++ I LV +D +KL +WAGL ++ DG RK + CSC+ ++DFGE T ALD L L+
Sbjct: 85 KQNNIDLVSMDEREKLAQWAGLTRMAADGSVRKTLKCSCLAVRDFGERTKALDYLLSQLQ 144
Score = 60.5 bits (140), Expect = 2e-08
Identities = 37/87 (42%), Positives = 49/87 (56%)
Frame = +1
Query: 88 ALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHRFHW 267
AL+ VL A GL+ GL E +ALD+R A LCVLA++C++ YKKLV AL ++
Sbjct: 32 ALRIVLMKARETNGLICGLSEVTRALDRRTAHLCVLADDCEDEEYKKLVTALAKQNNID- 90
Query: 268 SRLTTTKSLENGLVSARLTRMARQGKL 348
L + E A LTRMA G +
Sbjct: 91 --LVSMDEREKLAQWAGLTRMAADGSV 115
>UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5;
Plasmodium|Rep: 40S ribosomal protein S12 - Plasmodium
falciparum (isolate 3D7)
Length = 141
Score = 60.9 bits (141), Expect = 1e-08
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +1
Query: 19 MADVEVEVPTNPILSGNNMDVNV-ALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVL 195
M+DVE N ++ + NV A+Q+V+K A +H GL G+ E K+++ ++A +C L
Sbjct: 1 MSDVE-SADNNVVVEEKAVFDNVTAIQKVIKNAHVHDGLKIGIREVIKSIESQEAKVCFL 59
Query: 196 AENCDEAAYKKLVQALCNE 252
++ C E AYKKL+ LC E
Sbjct: 60 SDVCSEPAYKKLITTLCAE 78
Score = 59.7 bits (138), Expect = 3e-08
Identities = 28/52 (53%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +3
Query: 258 IPLVKVDNNKK-LGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVL 410
IPL V N+ K LG WAGL K+D +G ARKI+G S V + DFGE++ D L
Sbjct: 81 IPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIGASSVAVVDFGEDSAEKDFL 132
>UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n=1;
Mus musculus|Rep: UPI0000D633F9 UniRef100 entry - Mus
musculus
Length = 132
Score = 55.6 bits (128), Expect = 4e-07
Identities = 23/58 (39%), Positives = 39/58 (67%)
Frame = +3
Query: 255 QIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLXDYLKS 428
QI L+K D+ + L EW + D++GK+ K+V C+ VV+K +G+E+ A D + +Y K+
Sbjct: 73 QISLIKDDDKRNLREWGRPLQTDQEGKSNKVVVCNSVVVKGYGKESQAKDDIKEYFKT 130
Score = 36.3 bits (80), Expect = 0.29
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 55 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLV 234
+L + +D+N L +VL A H G + AK + NC+E Y KLV
Sbjct: 6 LLGESKIDINTDLGDVLTYAPSHDGKLVQDTNTAKLPRPSTSAKLSFPVNCNEPMYVKLV 65
Query: 235 QALCNEHR 258
+A C EH+
Sbjct: 66 KAHCAEHQ 73
>UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S12, putative -
Babesia bovis
Length = 167
Score = 54.8 bits (126), Expect = 8e-07
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +1
Query: 91 LQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEH 255
LQ +L A+ +G L+ G+H+ KA++ + A CV++ E AY KL++ALC EH
Sbjct: 51 LQRLLHLAMANGCLLRGIHQVTKAIEAKNARACVVSTQTSEEAYLKLIRALCKEH 105
Score = 52.4 bits (120), Expect = 4e-06
Identities = 24/59 (40%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Frame = +3
Query: 258 IPLVKVD-NNKKLGEWAGLCKIDKDGKARKIVGCSCVVI-KDFGEETPALDVLXDYLKS 428
+P ++ + +++K+GEWAGLCK D +G ARKIVG + V I +F E++ + + + +KS
Sbjct: 107 VPCIETEFDSEKIGEWAGLCKYDIEGVARKIVGATSVAITNNFDEKSESAEEMISLIKS 165
>UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1;
Tetrahymena thermophila SB210|Rep: 40S ribosomal protein
S12 - Tetrahymena thermophila SB210
Length = 126
Score = 54.4 bits (125), Expect = 1e-06
Identities = 24/79 (30%), Positives = 45/79 (56%)
Frame = +1
Query: 58 LSGNNMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLVQ 237
++ N +N L +V+K++ + GLHE + ++ +QA+ +AE+CD+ Y KLV+
Sbjct: 1 MADQNQQLNEVLAKVIKSSNCQDAISKGLHEVLRTIEAKQALFVCVAEDCDQGNYVKLVK 60
Query: 238 ALCNEHRFHWSRLTTTKSL 294
ALC ++ + + SL
Sbjct: 61 ALCAKNEIKYVSVPKRASL 79
Score = 32.7 bits (71), Expect = 3.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 249 RTQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 389
+ +I V V LGE+ G + G+ +K+ GCS + I+ + E
Sbjct: 65 KNEIKYVSVPKRASLGEYLGHFTANAKGEIKKVKGCSSLAIRKYAPE 111
>UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramecium
tetraurelia|Rep: 40S ribosomal protein S12 - Paramecium
tetraurelia
Length = 129
Score = 52.8 bits (121), Expect = 3e-06
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +1
Query: 91 LQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLVQALCNE 252
L+ V++T+L G L G+HE KA++ +QA VLA++C E YKKL+ AL +
Sbjct: 14 LKRVVQTSLHRGLLAKGVHEVCKAIESKQAKFVVLADDCTEDTYKKLIVALAKQ 67
Score = 36.3 bits (80), Expect = 0.29
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +3
Query: 255 QIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 389
QIP+ KV+ LGEW G+ K K K CS V +K F E
Sbjct: 69 QIPVWKVEKGALLGEWIGISKFLTKTKKIKSRKCSSVALKHFAIE 113
>UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_306_61647_62024 - Giardia lamblia
ATCC 50803
Length = 125
Score = 50.4 bits (115), Expect = 2e-05
Identities = 23/68 (33%), Positives = 39/68 (57%)
Frame = +1
Query: 91 LQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHRFHWS 270
L+E K GLV G + K L++++A +C LA +C+E Y +V+ LC E++ H
Sbjct: 10 LKETFKRIHNMDGLVTGHRQVFKYLERKRAKICFLASDCEEKQYADIVECLCKEYKVHLC 69
Query: 271 RLTTTKSL 294
+ T ++L
Sbjct: 70 KKFTRRTL 77
>UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_157,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 779
Score = 43.6 bits (98), Expect = 0.002
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 154 AKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHRFH-WSRLTTTKSLENGLV-SARLTR 327
AKA++ +QA VLA++C E YKKLV AL + + W LENGL + L R
Sbjct: 54 AKAIESKQAKFIVLADDCSEDTYKKLVIALAKQFQIPVWKVEKGVLYLENGLAFQSSLLR 113
Query: 328 MARQGKLSA 354
R + +A
Sbjct: 114 QRRSNQENA 122
>UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S12 - Entamoeba histolytica HM-1:IMSS
Length = 136
Score = 42.3 bits (95), Expect = 0.004
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 91 LQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLVQALCNE 252
++ +L A L G+ + K ++ ++A+ C +AE+CD Y L++A+C E
Sbjct: 26 IKAILYQARAQNALTKGIRQCLKVIEAKKALYCFIAEDCDNDKYTGLLKAICKE 79
Score = 38.3 bits (85), Expect = 0.071
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 258 IPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVI 371
+ +V V +LGEW CKI +DG A +I CSC ++
Sbjct: 82 VKIVMVPQKIQLGEWTNQCKI-RDGAAVRIAKCSCAIV 118
>UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiella
natans|Rep: Ribosomal protein S12 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 110
Score = 36.3 bits (80), Expect = 0.29
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 73 MDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLVQALC 246
M + L+ ++K A +V G+ E K + + C+LA+NC++ YK ++ LC
Sbjct: 1 MIIEKFLKILIKEATKKNLIVKGIKETIKFIIRGYGYACILAKNCNKKQYKIAIKTLC 58
>UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria
gruberi|Rep: Ribosomal protein L7A - Naegleria gruberi
Length = 258
Score = 34.7 bits (76), Expect = 0.87
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 130 LVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLVQALCNE 252
L+HG++E KA++++QA L V+A + + + ALC +
Sbjct: 135 LIHGINEVVKAVERKQASLVVIAHDVEPIELVLFLPALCKK 175
>UniRef50_Q0DBH2 Cluster: Os06g0565000 protein; n=3; Oryza
sativa|Rep: Os06g0565000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 687
Score = 34.3 bits (75), Expect = 1.2
Identities = 24/74 (32%), Positives = 34/74 (45%)
Frame = +1
Query: 85 VALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHRFH 264
V E+L T LIHG ++ E A L + D + Y L+Q LCN H+
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL---ELDISLYGALIQGLCNVHKLD 450
Query: 265 WSRLTTTKSLENGL 306
++ TK E+GL
Sbjct: 451 EAKSLLTKMDESGL 464
>UniRef50_UPI0001555481 Cluster: PREDICTED: similar to structural
maintenance of chromosomes 1B; n=3; Mammalia|Rep:
PREDICTED: similar to structural maintenance of
chromosomes 1B - Ornithorhynchus anatinus
Length = 1329
Score = 33.1 bits (72), Expect = 2.7
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Frame = +1
Query: 130 LVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHRF---HWSRLTTTKSLEN 300
L+HG H + + EN +E + +++ C+E RF H SR LE
Sbjct: 35 LIHGAHIGKPVSTTASVKVVYIEENGEEKTFSRIIHGDCSEFRFNDNHVSRSAYAAELEK 94
Query: 301 -GLVSARLTRMARQGKLSAAPVLSSK 375
G++S + QG + + + K
Sbjct: 95 IGIISKARNCLVFQGTVESIAMKKPK 120
>UniRef50_Q3W1D8 Cluster: Catalytic domain of components of various
dehydrogenase complexes; n=4; Actinomycetales|Rep:
Catalytic domain of components of various dehydrogenase
complexes - Frankia sp. EAN1pec
Length = 294
Score = 33.1 bits (72), Expect = 2.7
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 76 DVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKL 231
D N AL+ L+T + H VHG K LD R+ VL + N E ++
Sbjct: 110 DANAALRGGLRTRVAHYPFVHGKLTLDKVLDGRRVVLGTVVPNLHEVGLAEI 161
>UniRef50_A7PNI8 Cluster: Chromosome chr1 scaffold_22, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr1 scaffold_22, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 966
Score = 32.7 bits (71), Expect = 3.5
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +1
Query: 73 MDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLVQALCNE 252
++ VA + TAL+HG + E AK + K C+ D Y ++ LCNE
Sbjct: 457 LNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKP---DLLLYGTILWGLCNE 513
Query: 253 HRFHWSRLTTTKSLENGL 306
R ++L + E+G+
Sbjct: 514 SRLEEAKLLIGEIKESGI 531
>UniRef50_Q3SE69 Cluster: Protein containing mutated RNA-dependent
RNA polymerase domain; n=1; Paramecium tetraurelia|Rep:
Protein containing mutated RNA-dependent RNA polymerase
domain - Paramecium tetraurelia
Length = 1089
Score = 32.7 bits (71), Expect = 3.5
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +1
Query: 232 VQALCNEHRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAAPVLSSKISARKLQR 399
+Q + NEH H + + +EN L+ + +Q +L P++ +K+ +++ R
Sbjct: 627 IQKIFNEHLNHINTSLSLNEIENKLLDKKFELDIQQDQLQKGPLIQTKVDTKQINR 682
>UniRef50_A2E257 Cluster: Ribosomal protein L7Ae, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L7Ae,
putative - Trichomonas vaginalis G3
Length = 127
Score = 32.7 bits (71), Expect = 3.5
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 82 NVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEH 255
N ++ L + G + G+ KA+ K + L +LA++ + YK LV LC +H
Sbjct: 9 NQVIEAGLHQINLSGTVAKGIKCTIKAILKDKVQLVLLADDTENKDYKNLVAGLCKKH 66
>UniRef50_UPI00015609DE Cluster: PREDICTED: similar to family with
sequence similarity 48, member A; n=2; Equus
caballus|Rep: PREDICTED: similar to family with sequence
similarity 48, member A - Equus caballus
Length = 953
Score = 32.3 bits (70), Expect = 4.7
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 250 RCTEPEQVSCMRLHHSSQPKHIVLLASCQEL*RXREDRAQDHHGLKLSLAP--LAVLHSR 77
RC+ P L H P + +L SCQ +E A + + LK+S A + V R
Sbjct: 241 RCSSPALSRQQELSHGPPPPELTVLTSCQP---SKESNAGEQYDLKISGAGNYVDVWEQR 297
Query: 76 PC 71
PC
Sbjct: 298 PC 299
>UniRef50_Q08402 Cluster: E3 protein; n=1; Bacillus phage SPO1|Rep:
E3 protein - Bacteriophage SP01
Length = 237
Score = 32.3 bits (70), Expect = 4.7
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 208 DEAAYKKLVQALCNEHRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAAPVLSSKISAR 387
DE A KK ++ L +E W L + +EN + RMA K P L+ K S++
Sbjct: 129 DEKAIKKYIKGLTDEQLQAWCELEGAEWVENEHRNINRMRMAMAIKAVHFPELAKKPSSK 188
Query: 388 KLQRW 402
K ++
Sbjct: 189 KKSKY 193
>UniRef50_Q8GZ45 Cluster: Probable threonyl-tRNA synthetase,
cytoplasmic; n=2; Arabidopsis thaliana|Rep: Probable
threonyl-tRNA synthetase, cytoplasmic - Arabidopsis
thaliana (Mouse-ear cress)
Length = 458
Score = 31.9 bits (69), Expect = 6.2
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +1
Query: 163 LDKRQAVLCVLAENCDEAAYKKLVQALCNEHRFHWSRLTTTKSLENGLVSAR 318
L RQA++C L+E+C ++Y K VQ NE ++ + +SL + AR
Sbjct: 355 LSPRQAIVCSLSEDC--SSYAKQVQKQINEVGYYVDIDESDRSLRKKVADAR 404
>UniRef50_A3S4U4 Cluster: Putative uncharacterized protein; n=1;
Prochlorococcus marinus str. MIT 9211|Rep: Putative
uncharacterized protein - Prochlorococcus marinus str.
MIT 9211
Length = 195
Score = 31.5 bits (68), Expect = 8.1
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +1
Query: 28 VEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLV 135
+ + +P + +L+G N D+++ L++ LK +I GGL+
Sbjct: 93 ISLNIP-DIVLTGTNYDIDIILEKPLKDGIIAGGLI 127
>UniRef50_Q6ZDB7 Cluster: Putative pentatricopeptide (PPR)
repeat-containing protein; n=2; Oryza sativa|Rep:
Putative pentatricopeptide (PPR) repeat-containing
protein - Oryza sativa subsp. japonica (Rice)
Length = 735
Score = 31.5 bits (68), Expect = 8.1
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1
Query: 79 VNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENC--DEAAYKKLVQALCNE 252
V + L+ L+TA + L+HGL + + + A++C D Y +V LC
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 253 HRFHWSRLTTTKSLENG 303
R + + +++ NG
Sbjct: 191 GRTEEAEVLLEEAMSNG 207
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,123,614
Number of Sequences: 1657284
Number of extensions: 8457651
Number of successful extensions: 25637
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 24911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25630
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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