Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1104
         (439 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)              107   3e-24
SB_39360| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.7  
SB_49657| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.9  
SB_7505| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   5.1  
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.9  
SB_43749| Best HMM Match : Lipase_GDSL (HMM E-Value=0.077)             27   8.9  

>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
          Length = 427

 Score =  107 bits (258), Expect = 3e-24
 Identities = 56/109 (51%), Positives = 72/109 (66%)
 Frame = +1

Query: 19  MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLA 198
           M+D E +  T    +G  MD+N ALQEVLKTALIH GL  GLHE AK+LDKR+A LC+L+
Sbjct: 1   MSDAEGDDTTQQPAAGGAMDINTALQEVLKTALIHDGLSRGLHEAAKSLDKREAHLCILS 60

Query: 199 ENCDEAAYKKLVQALCNEHRFHWSRLTTTKSLENGLVSARLTRMARQGK 345
            NCDEA Y KLV+ALC EH     ++  +K L      A L ++ ++GK
Sbjct: 61  NNCDEAMYVKLVEALCAEHGIPLLKVDDSKKLGEW---AGLCKIDKEGK 106



 Score = 80.6 bits (190), Expect = 5e-16
 Identities = 33/39 (84%), Positives = 39/39 (100%)
 Frame = +3

Query: 258 IPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 374
           IPL+KVD++KKLGEWAGLCKIDK+GKARK+VGCSCVV+K
Sbjct: 81  IPLLKVDDSKKLGEWAGLCKIDKEGKARKVVGCSCVVVK 119


>SB_39360| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 209

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 371 DDNTGAADNFPCLAILVNLAETSPFSKLF 285
           DD    +D +PC+ I+VN++ T   +K F
Sbjct: 10  DDGLTCSDVYPCVEIMVNISSTGSETKKF 38


>SB_49657| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 228

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 11/52 (21%)
 Frame = +3

Query: 231 CSGSVQRTQIPLVKVDNNKKLGEW-----------AGLCKIDKDGKARKIVG 353
           C+  V RT  P  K+D +  LG W           AG C+ D DG+ +K  G
Sbjct: 82  CNTLVDRTDYPAAKIDRD--LGSWVRREPQRGLCMAGRCRKDTDGQEKKTDG 131


>SB_7505| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 584

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 196 AENCDEA-AYKKLVQALCNEHRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAAP 360
           A++C E    + LV+ L + HR+    L   K L+NG +S  L   A + +L   P
Sbjct: 60  AKHCPEIDPIRHLVRTLKSRHRYFKCHLVFVKRLDNGSISNVL--RAHRNELEIGP 113


>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 216

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
 Frame = +1

Query: 163 LDKRQAVLCVLAENC----DEAAYKKLVQALCNEHRF-HWSRLTTTKSLE----NGLVSA 315
           L  R+ V C+L  N     D    K+++  LC EH F  W+ ++  + +        +  
Sbjct: 123 LHSRKPVPCILVGNKSDLPDRPVDKEIIDKLCKEHSFLCWTEMSVKEDINVKKPMEYLVK 182

Query: 316 RLTRMARQGKLSAAPVLSSK 375
            L    ++G +   PV+  K
Sbjct: 183 HLMEDGKEGSVPYKPVMDQK 202


>SB_43749| Best HMM Match : Lipase_GDSL (HMM E-Value=0.077)
          Length = 399

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 315 KIDKDGKARKIVGCSCVVIKDFG 383
           ++ KD K +K++   CV ++DFG
Sbjct: 214 RLGKDPKTKKVMNPECVNLEDFG 236


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,652,504
Number of Sequences: 59808
Number of extensions: 289884
Number of successful extensions: 805
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 847047381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)