Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1104
(439 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12 p... 105 7e-23
BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12 p... 105 7e-23
BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12 p... 105 7e-23
AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12 p... 105 7e-23
AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12 p... 105 7e-23
X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12 pro... 98 1e-20
BC034968-1|AAH34968.1| 538|Homo sapiens jub, ajuba homolog (Xen... 29 7.0
BC007580-1|AAH07580.1| 538|Homo sapiens JUB protein protein. 29 7.0
AY169959-1|AAO37641.1| 538|Homo sapiens ajuba protein. 29 7.0
>BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 105 bits (252), Expect = 7e-23
Identities = 53/98 (54%), Positives = 65/98 (66%)
Frame = +1
Query: 55 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLV 234
I +G MDVN ALQEVLKTALIH GL G+ E AKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHRFHWSRLTTTKSLENGLVSARLTRMARQGKL 348
+ALC EH+ + ++ K L + ++ R + K+
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103
Score = 96.3 bits (229), Expect = 4e-20
Identities = 39/57 (68%), Positives = 50/57 (87%)
Frame = +3
Query: 255 QIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLXDYLK 425
QI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+ +Y K
Sbjct: 73 QINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
>BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 105 bits (252), Expect = 7e-23
Identities = 53/98 (54%), Positives = 65/98 (66%)
Frame = +1
Query: 55 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLV 234
I +G MDVN ALQEVLKTALIH GL G+ E AKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHRFHWSRLTTTKSLENGLVSARLTRMARQGKL 348
+ALC EH+ + ++ K L + ++ R + K+
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103
Score = 96.3 bits (229), Expect = 4e-20
Identities = 39/57 (68%), Positives = 50/57 (87%)
Frame = +3
Query: 255 QIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLXDYLK 425
QI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+ +Y K
Sbjct: 73 QINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
>BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 105 bits (252), Expect = 7e-23
Identities = 53/98 (54%), Positives = 65/98 (66%)
Frame = +1
Query: 55 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLV 234
I +G MDVN ALQEVLKTALIH GL G+ E AKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHRFHWSRLTTTKSLENGLVSARLTRMARQGKL 348
+ALC EH+ + ++ K L + ++ R + K+
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103
Score = 96.3 bits (229), Expect = 4e-20
Identities = 39/57 (68%), Positives = 50/57 (87%)
Frame = +3
Query: 255 QIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLXDYLK 425
QI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+ +Y K
Sbjct: 73 QINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
>AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 105 bits (252), Expect = 7e-23
Identities = 53/98 (54%), Positives = 65/98 (66%)
Frame = +1
Query: 55 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLV 234
I +G MDVN ALQEVLKTALIH GL G+ E AKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHRFHWSRLTTTKSLENGLVSARLTRMARQGKL 348
+ALC EH+ + ++ K L + ++ R + K+
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103
Score = 96.3 bits (229), Expect = 4e-20
Identities = 39/57 (68%), Positives = 50/57 (87%)
Frame = +3
Query: 255 QIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLXDYLK 425
QI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+ +Y K
Sbjct: 73 QINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
>AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 105 bits (252), Expect = 7e-23
Identities = 53/98 (54%), Positives = 65/98 (66%)
Frame = +1
Query: 55 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLV 234
I +G MDVN ALQEVLKTALIH GL G+ E AKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHRFHWSRLTTTKSLENGLVSARLTRMARQGKL 348
+ALC EH+ + ++ K L + ++ R + K+
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103
Score = 96.3 bits (229), Expect = 4e-20
Identities = 39/57 (68%), Positives = 50/57 (87%)
Frame = +3
Query: 255 QIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLXDYLK 425
QI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+ +Y K
Sbjct: 73 QINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
>X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 98.3 bits (234), Expect = 1e-20
Identities = 51/98 (52%), Positives = 62/98 (63%)
Frame = +1
Query: 55 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEXAKALDKRQAVLCVLAENCDEAAYKKLV 234
I +G MDVN ALQEVLKTALIH GL G+ E AKALDKRQA LCV A NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65
Query: 235 QALCNEHRFHWSRLTTTKSLENGLVSARLTRMARQGKL 348
+AL EH+ + ++ K L + ++ R K+
Sbjct: 66 EALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKV 103
Score = 94.3 bits (224), Expect = 2e-19
Identities = 38/57 (66%), Positives = 49/57 (85%)
Frame = +3
Query: 255 QIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLXDYLK 425
QI L+KVD+NKKLGEW GLCKID++G RK+VGCSCVV+KD+G+E+ A DV+ +Y K
Sbjct: 73 QINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
>BC034968-1|AAH34968.1| 538|Homo sapiens jub, ajuba homolog
(Xenopus laevis) protein.
Length = 538
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 351 RQFSLPCHPCQSCRDQPILQAFCCCQP 271
R + C+ C+ CR Q + CCC P
Sbjct: 487 RDYHFECYHCEDCRMQLSDEEGCCCFP 513
>BC007580-1|AAH07580.1| 538|Homo sapiens JUB protein protein.
Length = 538
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 351 RQFSLPCHPCQSCRDQPILQAFCCCQP 271
R + C+ C+ CR Q + CCC P
Sbjct: 487 RDYHFECYHCEDCRMQLSDEEGCCCFP 513
>AY169959-1|AAO37641.1| 538|Homo sapiens ajuba protein.
Length = 538
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 351 RQFSLPCHPCQSCRDQPILQAFCCCQP 271
R + C+ C+ CR Q + CCC P
Sbjct: 487 RDYHFECYHCEDCRMQLSDEEGCCCFP 513
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,556,224
Number of Sequences: 237096
Number of extensions: 1386851
Number of successful extensions: 3580
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3577
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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