Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1103
(309 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 23 0.73
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 1.3
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 22 1.3
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 3.0
DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9 prot... 21 3.9
DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11 pro... 20 5.2
DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein. 20 5.2
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 20 5.2
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 20 6.8
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 19 9.0
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 19 9.0
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 19 9.0
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 19 9.0
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 23.0 bits (47), Expect = 0.73
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 196 VRDYFPELCSDLIPALTRLDVDDFPHDCTKNLEPPESNIK 77
V D P LC+ LI + L D NL+ + N+K
Sbjct: 41 VEDIDPTLCTHLIYSFVGLGDDSRIKHLEPNLDVNQGNLK 80
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.2 bits (45), Expect = 1.3
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1
Query: 40 FFFYMIKFSKV 72
+FFY++KF KV
Sbjct: 1028 YFFYLVKFYKV 1038
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 22.2 bits (45), Expect = 1.3
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1
Query: 40 FFFYMIKFSKV 72
+FFY++KF KV
Sbjct: 309 YFFYLVKFYKV 319
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 3.0
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +2
Query: 158 NQIGAKFWEVISDEHGIDATGAYSGDSDLQLEPSMSTITKLQGAST 295
N+I + W V D G AY GD + E S K + T
Sbjct: 911 NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKAEYIKT 956
>DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9
protein.
Length = 383
Score = 20.6 bits (41), Expect = 3.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 142 LDVDDFPHDCTKNLEPPESNIK*TL 68
LD DDF C K P + IK T+
Sbjct: 358 LDTDDFRGICGKGPYPIMNAIKQTI 382
>DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11
protein.
Length = 366
Score = 20.2 bits (40), Expect = 5.2
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = -1
Query: 129 ISLMIALKIWNPPNRILNKHFREFDHVKKKLI*KCNDFLQE 7
+ ++I++ WN N ILN ++ LI C F +
Sbjct: 96 LKVLISIGGWNAGNAILNGIVAS-SKLRASLISSCLSFFSQ 135
>DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein.
Length = 162
Score = 20.2 bits (40), Expect = 5.2
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 236 SDLQLEPSMSTITKLQGASTSRE 304
S + L+P +++ ++ GAST+ E
Sbjct: 18 SSMCLDPRLNSKIQVSGASTTDE 40
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 20.2 bits (40), Expect = 5.2
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +3
Query: 9 LVGNHCIFILIFFLHDQILESVYLIF 86
LVG+ I + +FF H + V +++
Sbjct: 266 LVGDSYIVMYVFFFHLSDVRYVMVVY 291
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 19.8 bits (39), Expect = 6.8
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -2
Query: 242 GRSRRCKHPWRQ 207
G C+H WRQ
Sbjct: 374 GNGYGCEHRWRQ 385
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 19.4 bits (38), Expect = 9.0
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -2
Query: 242 GRSRRCKHPWRQ 207
G C+H WRQ
Sbjct: 373 GNGYVCEHRWRQ 384
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 19.4 bits (38), Expect = 9.0
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -2
Query: 242 GRSRRCKHPWRQ 207
G C+H WRQ
Sbjct: 374 GNGYVCEHRWRQ 385
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 19.4 bits (38), Expect = 9.0
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +1
Query: 121 EGNRPHPGGSMRESDRSKVLGSNLG 195
E RP PGG + S + S G
Sbjct: 105 EDERPRPGGGTKYQTFSNLNISGFG 129
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 19.4 bits (38), Expect = 9.0
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 276 SFRGQVRPASC 308
S G VRPA+C
Sbjct: 134 SLTGPVRPAAC 144
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,823
Number of Sequences: 336
Number of extensions: 1433
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 5624413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -