Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1103
(309 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 92 9e-20
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 91 2e-19
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 91 2e-19
03_01_0034 + 318432-318825,318902-319851 88 1e-18
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 88 2e-18
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 86 6e-18
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 85 1e-17
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 79 5e-16
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 48 1e-06
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 41 2e-04
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 40 4e-04
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 40 5e-04
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 40 5e-04
06_01_0460 + 3276855-3277967 29 0.74
11_06_0703 + 26444128-26446215,26446525-26447226 28 1.3
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 27 3.0
08_01_0356 + 3131214-3132443,3132584-3132778,3132892-3132972,313... 27 3.0
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 27 3.0
09_04_0303 - 16505782-16506902,16507232-16507292 26 5.2
05_01_0170 + 1180168-1180367,1181538-1181598,1181657-1181659,118... 26 5.2
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 26 6.9
05_01_0334 - 2642998-2643063,2643125-2643169,2643552-2643617,264... 26 6.9
04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158 26 6.9
10_07_0061 + 12489552-12489674,12490761-12490836,12490916-124909... 25 9.2
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 25 9.2
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 25 9.2
02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042 25 9.2
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 91.9 bits (218), Expect = 9e-20
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIGAKFWEVI DEHG+DATG Y+GDSDLQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLE 45
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
INVYYNEASGG+YVPRAV
Sbjct: 47 INVYYNEASGGRYVPRAV 64
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 91.1 bits (216), Expect = 2e-19
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG YSGDSDLQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLE 45
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
INVYYNEASGG+YVPRAV
Sbjct: 47 INVYYNEASGGRYVPRAV 64
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 91.1 bits (216), Expect = 2e-19
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG YSGDSDLQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLE 45
Score = 39.5 bits (88), Expect = 5e-04
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
INVYYNEASGG++VPRAV
Sbjct: 47 INVYYNEASGGRFVPRAV 64
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 88.2 bits (209), Expect = 1e-18
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIGAKFWEV+ EHGIDATG Y GDSDLQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLE 45
Score = 35.5 bits (78), Expect = 0.009
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
+NVYYNEAS G++VPRAV
Sbjct: 47 VNVYYNEASCGRFVPRAV 64
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 87.8 bits (208), Expect = 2e-18
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIGAKFWEV+ DEHGID TG Y+G+SDLQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLE 45
Score = 35.5 bits (78), Expect = 0.009
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
+NVYYNEAS G++VPRAV
Sbjct: 47 VNVYYNEASCGRFVPRAV 64
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 85.8 bits (203), Expect = 6e-18
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIG+KFWEV+ DEHGID TG Y+G SDLQLE
Sbjct: 181 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLE 225
Score = 35.5 bits (78), Expect = 0.009
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
+NVYYNEAS G++VPRAV
Sbjct: 227 VNVYYNEASCGRFVPRAV 244
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 84.6 bits (200), Expect = 1e-17
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIG+KFWEV+ DEHGID TG Y G SDLQLE
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLE 45
Score = 35.5 bits (78), Expect = 0.009
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
+NVYYNEAS G++VPRAV
Sbjct: 47 VNVYYNEASCGRFVPRAV 64
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 79.4 bits (187), Expect = 5e-16
Identities = 34/45 (75%), Positives = 37/45 (82%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIGAKFWEVI EHG+D TG Y+G S QLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLE 45
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
INVY+NEASGG++VPRAV
Sbjct: 47 INVYFNEASGGRHVPRAV 64
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 48.4 bits (110), Expect = 1e-06
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 122 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 220
REI+ IQ GQCGNQIG +FW+ + EHGI G
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDG 35
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 41.1 bits (92), Expect = 2e-04
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 238
MREI+ I GQ G Q+G WE+ EHGI+ G D+
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDT 40
Score = 25.8 bits (54), Expect = 6.9
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 259 NVYYNEASGGKYVPRAV 309
N +++E GK+VPRA+
Sbjct: 50 NTFFSETGAGKHVPRAI 66
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 235
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
Score = 26.2 bits (55), Expect = 5.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 259 NVYYNEASGGKYVPRAV 309
N +++E GK+VPRAV
Sbjct: 50 NTFFSETGAGKHVPRAV 66
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 39.5 bits (88), Expect = 5e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 235
MRE + I GQ G Q+G WE+ EHGI A G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSD 39
Score = 26.2 bits (55), Expect = 5.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 259 NVYYNEASGGKYVPRAV 309
N +++E GK+VPRAV
Sbjct: 50 NTFFSETGAGKHVPRAV 66
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 39.5 bits (88), Expect = 5e-04
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 238
MREI+ I GQ G Q+G WE+ EHGI G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRDA 40
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 259 NVYYNEASGGKYVPRAV 309
N +++E S GK+VPRA+
Sbjct: 110 NTFFSETSSGKHVPRAL 126
>06_01_0460 + 3276855-3277967
Length = 370
Score = 29.1 bits (62), Expect = 0.74
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 132 STSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNHQCLL*RSFRGQVRP 299
+T R+ +RS + G +R +PR A TC++ H LL R + P
Sbjct: 271 ATCRKARRTVRSLKGWGAIARLRDEESPRAAVACIGTCAMLHNVLLAREDHSALAP 326
>11_06_0703 + 26444128-26446215,26446525-26447226
Length = 929
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Frame = -3
Query: 244 QVGVAAVSTRGVNAVLVRDY----FPELCSDLIPALTRLDVDDFP 122
++ +AA++ G + V + FP LC ++P+L RLD+D+ P
Sbjct: 776 EISLAAMNEGGEDGTTVTEKGEASFPRLC--VLPSLKRLDIDNCP 818
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFW 181
MRE V +Q G N +G+ FW
Sbjct: 1 MREAVTVQVGGFANYVGSHFW 21
>08_01_0356 +
3131214-3132443,3132584-3132778,3132892-3132972,
3133324-3133383,3133466-3133560,3133660-3133816,
3133896-3134021,3134398-3134478,3134557-3134647,
3134735-3134868,3135068-3135136,3135219-3135308,
3135405-3135508,3135594-3135762,3136066-3136134
Length = 916
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 193 GRARH*RHGCLQRRLRPAA*TINV 264
GR H + G L+RR++P+ TIN+
Sbjct: 516 GRGEHPKMGKLKRRIKPSDITINI 539
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFW 181
MRE V +Q G N +G+ FW
Sbjct: 1 MREAVTVQVGGFANYVGSHFW 21
>09_04_0303 - 16505782-16506902,16507232-16507292
Length = 393
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +2
Query: 197 EHGIDATGAYSGDSDLQLEPSMSTITKLQGASTS 298
E+G+ +G+ D L+P T+ +QG S +
Sbjct: 273 EYGVGVQEIDAGEGDSSLQPGYKTVMVVQGVSAA 306
>05_01_0170 +
1180168-1180367,1181538-1181598,1181657-1181659,
1182396-1182443,1182979-1184595
Length = 642
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 9 LVGNHCIFILIFFLHDQILESVYLIFDSGGSKFLVQS*GKSS 134
L + CI L+FFLH S+++ F+ SK + GK S
Sbjct: 40 LASSFCIASLLFFLHSLFHVSLFIWFEE--SKVSSEGFGKGS 79
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 241 VGVAAVSTRGVNAVLVRDYFPELCSDLIPALTRLDVDDFPHD 116
+ A + + L R F ELCSDL+ L R VD+ D
Sbjct: 263 ITATADGPKHIETTLTRAKFEELCSDLLDRL-RTPVDNALRD 303
>05_01_0334 - 2642998-2643063,2643125-2643169,2643552-2643617,
2643625-2643730,2643770-2644349,2645780-2645871,
2645969-2646035,2646126-2646231,2646628-2646708,
2646789-2647058,2647158-2648788,2648834-2649385,
2650602-2651324,2651451-2651526
Length = 1486
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 270 IVDIDGSSCRSESPL*APVASMPCSSEITS 181
++++ G CR + P ++PCS E TS
Sbjct: 1367 LLNLKGKQCRFQHPPLVASQNLPCSLEATS 1396
>04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158
Length = 974
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +2
Query: 218 GAYSGDSDL--QLEPSMSTITKLQGASTS 298
GA +GD DL +L + TIT+LQGA S
Sbjct: 780 GAAAGDGDLAARLAAAEHTITELQGALDS 808
>10_07_0061 +
12489552-12489674,12490761-12490836,12490916-12490980,
12491089-12491166,12492156-12492236,12492813-12492974,
12493328-12493426,12493509-12494797,12495063-12495286,
12495373-12495500,12495596-12495634,12495724-12497178
Length = 1272
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 205 AVLVRDYFPELCSDLIPALTRLDVDDFPH 119
A +V+ P LC D P L RL D PH
Sbjct: 199 ARIVKVLQPALCLDPTPKLDRLCQDPVPH 227
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 155 GNQIGAKFWEVISDEHG--IDATGAYSGDSDLQLE 253
G+Q +KFW+ + +E G ++ + AY +D Q E
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTE 574
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 93 PNRILNKHFREFDHVKKKL 37
PN + +K EFDHVKK L
Sbjct: 161 PNAVDSKILGEFDHVKKGL 179
>02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042
Length = 819
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 149 QCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLEPS 259
QC ++G K E++ + IDA+ S D+ + S
Sbjct: 653 QCSVELGKKIEEILQKQTSIDASAPQSDIEDVTISLS 689
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,174,277
Number of Sequences: 37544
Number of extensions: 176926
Number of successful extensions: 453
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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