Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1103
         (309 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    27   0.21 
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    24   1.1  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    22   4.5  
AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    22   4.5  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    21   7.9  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    21   7.9  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 119 MREIVHIQAGQCGNQIGAKFWE 184
           MRE + +  GQ G QIG   W+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 173 KFWEVISDEHGIDATG 220
           KFW  + D  GI++TG
Sbjct: 225 KFWPTVCDYFGIESTG 240


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 78   NKHFREFDHVKKKLI 34
            N+H ++++HV KK +
Sbjct: 972  NQHLKKYNHVNKKAL 986


>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 167 GAKFWEVISDEHGI 208
           G++FW   S+ HG+
Sbjct: 17  GSRFWRACSNNHGM 30


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 190 DYFPELCSDLIPALTRLDVDDFPHDCTKNLEPP 92
           D  PE+ SDL   L  L + D P     + E P
Sbjct: 21  DSVPEVPSDLQQQLDELQLADKPEAPVDDAEQP 53


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 197 EHGIDATGAYSGDSDLQLEP 256
           E  +DA  A+  D  LQL P
Sbjct: 685 EQAVDAIAAWMEDHHLQLAP 704


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,058
Number of Sequences: 2352
Number of extensions: 5900
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 19884282
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)