Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1103
(309 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 87 3e-18
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 87 3e-18
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 86 5e-18
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 85 7e-18
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 85 7e-18
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 84 2e-17
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 84 2e-17
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 83 5e-17
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 82 9e-17
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 48 1e-06
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 48 1e-06
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 42 8e-05
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 40 3e-04
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 40 3e-04
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 40 3e-04
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 40 3e-04
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 38 0.002
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 38 0.002
At4g37190.1 68417.m05265 expressed protein 30 0.28
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 29 0.48
At2g26850.1 68415.m03221 F-box family protein contains Pfam PF00... 29 0.48
At5g55500.1 68418.m06912 beta-(1,2)-xylosyltransferase (XYLT) id... 27 1.9
At5g55310.1 68418.m06893 DNA topoisomerase I, putative similar t... 27 3.4
At3g18810.1 68416.m02389 protein kinase family protein contains ... 27 3.4
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 3.4
At3g09000.1 68416.m01053 proline-rich family protein 26 5.9
At1g63430.1 68414.m07173 leucine-rich repeat transmembrane prote... 26 5.9
At5g53510.1 68418.m06650 oligopeptide transporter OPT family pro... 25 7.8
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 86.6 bits (205), Expect = 3e-18
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLE 45
Score = 35.9 bits (79), Expect = 0.006
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
INVYYNEAS G++VPRAV
Sbjct: 47 INVYYNEASCGRFVPRAV 64
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 86.6 bits (205), Expect = 3e-18
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLE 45
Score = 35.9 bits (79), Expect = 0.006
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
INVYYNEAS G++VPRAV
Sbjct: 47 INVYYNEASCGRFVPRAV 64
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 85.8 bits (203), Expect = 5e-18
Identities = 38/45 (84%), Positives = 39/45 (86%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDS LQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLE 45
Score = 38.7 bits (86), Expect = 8e-04
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
I+VY+NEASGGKYVPRAV
Sbjct: 47 IDVYFNEASGGKYVPRAV 64
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 85.4 bits (202), Expect = 7e-18
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIG+KFWEV+ DEHGID TG Y G+SDLQLE
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLE 45
Score = 36.7 bits (81), Expect = 0.003
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
+NVYYNEAS G+YVPRA+
Sbjct: 47 VNVYYNEASCGRYVPRAI 64
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 85.4 bits (202), Expect = 7e-18
Identities = 38/46 (82%), Positives = 42/46 (91%), Gaps = 1/46 (2%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD-SDLQLE 253
MREI+HIQ GQCGNQIG+KFWEVI DEHGID+TG YSGD +DLQLE
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLE 46
Score = 41.1 bits (92), Expect = 1e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
INVYYNEASGG+YVPRAV
Sbjct: 48 INVYYNEASGGRYVPRAV 65
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 84.2 bits (199), Expect = 2e-17
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIGAKFWEV+ EHGID+TG Y G++DLQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLE 45
Score = 35.5 bits (78), Expect = 0.007
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
+NVYYNEAS G++VPRAV
Sbjct: 47 VNVYYNEASCGRFVPRAV 64
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 83.8 bits (198), Expect = 2e-17
Identities = 36/46 (78%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS-DLQLE 253
MREI+H+Q GQCGNQIG+KFWEVI DEHG+D TG Y+GDS DLQLE
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLE 46
Score = 41.1 bits (92), Expect = 1e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
INVYYNEASGG+YVPRAV
Sbjct: 48 INVYYNEASGGRYVPRAV 65
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 82.6 bits (195), Expect = 5e-17
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIG+KFWEV++ EHGID TG Y GDS+LQLE
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLE 45
Score = 37.1 bits (82), Expect = 0.002
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
+NVYYNEAS G+YVPRAV
Sbjct: 47 VNVYYNEASCGRYVPRAV 64
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 81.8 bits (193), Expect = 9e-17
Identities = 36/45 (80%), Positives = 38/45 (84%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 253
MREI+HIQ GQCGNQIGAKFWEVI EHGID TG GD+DLQLE
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLE 45
Score = 40.7 bits (91), Expect = 2e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 256 INVYYNEASGGKYVPRAV 309
INVY+NEASGGKYVPRAV
Sbjct: 47 INVYFNEASGGKYVPRAV 64
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 48.0 bits (109), Expect = 1e-06
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +2
Query: 122 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 220
REI+ +Q GQCGNQIG +FW+ + EHGI G
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDG 35
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 48.0 bits (109), Expect = 1e-06
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +2
Query: 122 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 220
REI+ +Q GQCGNQIG +FW+ + EHGI G
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDG 35
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 41.9 bits (94), Expect = 8e-05
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 238
MREI+ I GQ G Q+G WE+ EHGI G DS
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDS 40
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 259 NVYYNEASGGKYVPRAV 309
N +++E S G++VPRAV
Sbjct: 50 NTFFSETSSGQHVPRAV 66
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 238
MREI+ I GQ G Q+G WE+ EHGI G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT 40
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 259 NVYYNEASGGKYVPRAV 309
N +++E GK+VPRAV
Sbjct: 50 NTFFSETGAGKHVPRAV 66
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 238
MREI+ I GQ G Q+G WE+ EHGI G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT 40
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 259 NVYYNEASGGKYVPRAV 309
N +++E GK+VPRAV
Sbjct: 50 NTFFSETGAGKHVPRAV 66
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 39.9 bits (89), Expect = 3e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 235
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 259 NVYYNEASGGKYVPRAV 309
N +++E GK+VPRAV
Sbjct: 50 NTFFSETGAGKHVPRAV 66
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 39.9 bits (89), Expect = 3e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 235
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 259 NVYYNEASGGKYVPRAV 309
N +++E GK+VPRAV
Sbjct: 50 NTFFSETGAGKHVPRAV 66
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 235
MRE + I GQ G Q+G WE+ EHGI G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 259 NVYYNEASGGKYVPRAV 309
N +++E GK+VPRAV
Sbjct: 50 NTFFSETGAGKHVPRAV 66
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 235
MRE + I GQ G Q+G WE+ EHGI G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 259 NVYYNEASGGKYVPRAV 309
N +++E GK+VPRAV
Sbjct: 50 NTFFSETGAGKHVPRAV 66
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.3 bits (65), Expect = 0.28
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 119 MREIVHIQAGQCGNQIGAKFW 181
MREIV IQ G+ N +G+ FW
Sbjct: 1 MREIVTIQVGEFANFVGSHFW 21
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 29.5 bits (63), Expect = 0.48
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 125 EIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLEPSMSTI 271
+I++ A + G+ GA FWEVIS + ++G S + L ST+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVIS-----EGMSNFAGPSSIILSDKSSTV 389
>At2g26850.1 68415.m03221 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 29.5 bits (63), Expect = 0.48
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 181 PELCSDLIPALTRLDVDDFPHDCTKNLEPP 92
P+L S ++ ++ LD+ D P DC L PP
Sbjct: 50 PDLASPVLGKMSILDLPDLPLDCILELLPP 79
>At5g55500.1 68418.m06912 beta-(1,2)-xylosyltransferase (XYLT)
identical to SP|Q9LDH0
Length = 534
Score = 27.5 bits (58), Expect = 1.9
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Frame = -3
Query: 280 KLRYSRH*WFKLQVGVAAVSTRGVNAVLVRDYFPE------LCSDLIPALTRLDVDDFPH 119
+L + RH F G +AVS R VN ++ +Y E DL+ ++ +D +DF
Sbjct: 171 RLGFKRHRRFGGGEGGSAVSRRLVNDEMLNEYMQEGGIDRHTMRDLVASIRAVDTNDFV- 229
Query: 118 DCTKNLEPP 92
C + +E P
Sbjct: 230 -CEEWVEEP 237
>At5g55310.1 68418.m06893 DNA topoisomerase I, putative similar to
Swiss-Prot:P30181 DNA topoisomerase I [Arabidopsis
thaliana]
Length = 917
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 193 GRARH*RHGCLQRRLRPAA*TINV 264
GR H + G L++R+RP TIN+
Sbjct: 511 GRGEHPKMGKLKKRIRPCDITINI 534
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 173 KFWEVISDEHGIDATGAYSGDSDLQLEPSMSTITKLQ--GASTSR 301
KF +V D H A+ Y S+ L+PS S+ +++ GA+ ++
Sbjct: 649 KFRKVALDSHEYGASSEYGNTSEYGLDPSSSSSEEIRRGGANNNK 693
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 140 QAGQCGNQIGAKFWEVISDEHGIDATGAYSG 232
QA G IG ++W +IS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 126 KSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCS 248
K TS AG+R SSG TS TP + TPT S
Sbjct: 133 KPQTSSSSVAGLRRPSSSGSSRSTSRPATP-TRRSTTPTTS 172
>At1g63430.1 68414.m07173 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profiles: PF00069
Eukaryotic protein kinase domain, PF00560 Leucine Rich
Repeat; contains 1 predicted transmembrane domain
Length = 664
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +2
Query: 2 CNSCRKSLHFYINFFFT*SNSRKCLFNIRFGGFQIFSAIMREIVHIQAGQCGN 160
C S K F NFF N KCL N+ FQ +++ H + QC N
Sbjct: 206 CKSL-KVADFSYNFFV--GNIPKCLENLPRTSFQGNCMQNKDLKHRSSSQCAN 255
>At5g53510.1 68418.m06650 oligopeptide transporter OPT family
protein similar to SP|P40900 Sexual differentiation
process protein isp4 {Schizosaccharomyces pombe},
oligopeptide transporter Opt1p [Candida albicans]
GI:2367386; contains Pfam profile PF03169: OPT
oligopeptide transporter protein
Length = 741
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 130 DFPHDCTKNLEPPESNIK*TLSRI 59
D PH C K+L PP+S + R+
Sbjct: 556 DIPHLCDKSLLPPDSEWTCPMDRV 579
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,080,336
Number of Sequences: 28952
Number of extensions: 135577
Number of successful extensions: 358
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 321405440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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