Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1102
         (419 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    25   0.30 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   1.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.4  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   6.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   6.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   8.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    20   8.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   8.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   8.5  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 25.0 bits (52), Expect = 0.30
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -2

Query: 319 DVRFDVLDHYTHYRVRRVLVISFRCSKKNSSSCASLPLTEARTRLMRSMYFPTQ 158
           +V F+ L ++      R+L + F    +   S  S+P T  R  LM S  FP +
Sbjct: 304 NVSFNSLKYFVLDEADRMLDMGFLGDVEEMLSHQSMPATGERQTLMFSATFPEE 357


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 89  RARPLLLQNRTKLILHGNTIQ 27
           R +  L QNR + + HG T+Q
Sbjct: 163 RLKAQLWQNRYETVAHGMTVQ 183


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 373 HDVSAQSFCSARLRP 417
           HD+S   FC+   RP
Sbjct: 545 HDLSPDQFCNGDNRP 559


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 70  FRTELSSFFTVTPYSLYGA 14
           FR    S FT+  YSL+ A
Sbjct: 223 FRVAFPSVFTLIDYSLWKA 241


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -2

Query: 322 VDVRFDVLDHYTHYRVRR 269
           V +  DV++H+ H+   R
Sbjct: 474 VKILLDVINHFPHFTAAR 491


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 393 ALGRDIVWTXSPYLRIP 343
           +LGR  +W  + Y R+P
Sbjct: 322 SLGRVPIWPYTLYFRMP 338


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 393 ALGRDIVWTXSPYLRIP 343
           +LGR  +W  + Y R+P
Sbjct: 329 SLGRVPIWPYTLYFRMP 345


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 125 RXELSGTTGRLLRGEVHGPHQP 190
           R + S TTG ++    HG   P
Sbjct: 32  RIDFSNTTGAVVECSAHGNPTP 53


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory
          receptor candidate 15 protein.
          Length = 455

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 58 LSSFFTVTPYSLY 20
          ++ FF +TP S+Y
Sbjct: 12 VAKFFAITPSSIY 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,730
Number of Sequences: 336
Number of extensions: 1274
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)