Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1102
         (419 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85108-1|CAA59429.1| 1331|Homo sapiens alpha3b subunit of lamini...    29   8.4  
X85107-1|CAA59428.1| 1238|Homo sapiens alpha3a subunit of lamini...    29   8.4  
X84900-1|CAA59325.1| 1806|Homo sapiens alpha 3B chain of laminin...    29   8.4  
L34155-1|AAA59483.1| 1713|Homo sapiens epiligrin alpha 3 subunit...    29   8.4  
AY327116-1|AAQ72571.1| 3277|Homo sapiens laminin alpha 3 splice ...    29   8.4  
AY327115-1|AAQ72570.1| 3333|Homo sapiens laminin alpha 3 splice ...    29   8.4  
AY327114-1|AAQ72569.1| 1668|Homo sapiens laminin alpha 3 splice ...    29   8.4  
AB208853-1|BAD92090.1| 1408|Homo sapiens Laminin alpha 3b chain ...    29   8.4  
AB107369-1|BAD13428.1| 3333|Homo sapiens laminin alpha 3b chain ...    29   8.4  

>X85108-1|CAA59429.1| 1331|Homo sapiens alpha3b subunit of laminin 5
            protein.
          Length = 1331

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 179  PHQPRPSFGQR-KTGTRRGILFRASERD 259
            PH P P+FGQ  +T   RG+LF A   D
Sbjct: 1088 PHAPIPTFGQTIQTTVDRGLLFFAENGD 1115


>X85107-1|CAA59428.1| 1238|Homo sapiens alpha3a subunit of laminin 5
            protein.
          Length = 1238

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 179  PHQPRPSFGQR-KTGTRRGILFRASERD 259
            PH P P+FGQ  +T   RG+LF A   D
Sbjct: 995  PHAPIPTFGQTIQTTVDRGLLFFAENGD 1022


>X84900-1|CAA59325.1| 1806|Homo sapiens alpha 3B chain of laminin-5
            protein.
          Length = 1806

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 179  PHQPRPSFGQR-KTGTRRGILFRASERD 259
            PH P P+FGQ  +T   RG+LF A   D
Sbjct: 1088 PHAPIPTFGQTIQTTVDRGLLFFAENGD 1115


>L34155-1|AAA59483.1| 1713|Homo sapiens epiligrin alpha 3 subunit
            protein.
          Length = 1713

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 179  PHQPRPSFGQR-KTGTRRGILFRASERD 259
            PH P P+FGQ  +T   RG+LF A   D
Sbjct: 995  PHAPIPTFGQTIQTTVDRGLLFFAENGD 1022


>AY327116-1|AAQ72571.1| 3277|Homo sapiens laminin alpha 3 splice
            variant b2 protein.
          Length = 3277

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 179  PHQPRPSFGQR-KTGTRRGILFRASERD 259
            PH P P+FGQ  +T   RG+LF A   D
Sbjct: 2559 PHAPIPTFGQTIQTTVDRGLLFFAENGD 2586


>AY327115-1|AAQ72570.1| 3333|Homo sapiens laminin alpha 3 splice
            variant b1 protein.
          Length = 3333

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 179  PHQPRPSFGQR-KTGTRRGILFRASERD 259
            PH P P+FGQ  +T   RG+LF A   D
Sbjct: 2615 PHAPIPTFGQTIQTTVDRGLLFFAENGD 2642


>AY327114-1|AAQ72569.1| 1668|Homo sapiens laminin alpha 3 splice
            variant a protein.
          Length = 1668

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 179  PHQPRPSFGQR-KTGTRRGILFRASERD 259
            PH P P+FGQ  +T   RG+LF A   D
Sbjct: 950  PHAPIPTFGQTIQTTVDRGLLFFAENGD 977


>AB208853-1|BAD92090.1| 1408|Homo sapiens Laminin alpha 3b chain
           variant protein.
          Length = 1408

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 179 PHQPRPSFGQR-KTGTRRGILFRASERD 259
           PH P P+FGQ  +T   RG+LF A   D
Sbjct: 690 PHAPIPTFGQTIQTTVDRGLLFFAENGD 717


>AB107369-1|BAD13428.1| 3333|Homo sapiens laminin alpha 3b chain
            protein.
          Length = 3333

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 179  PHQPRPSFGQR-KTGTRRGILFRASERD 259
            PH P P+FGQ  +T   RG+LF A   D
Sbjct: 2615 PHAPIPTFGQTIQTTVDRGLLFFAENGD 2642


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,507,844
Number of Sequences: 237096
Number of extensions: 775035
Number of successful extensions: 2521
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2520
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)