Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1102
(419 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 4.4
DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 4.4
DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 4.4
DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 4.4
DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 4.4
DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 4.4
DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 4.4
AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA... 28 4.4
DQ398890-1|ABD61606.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 5.8
AY113304-1|AAM29309.1| 818|Drosophila melanogaster AT27185p pro... 27 7.7
>DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA
protein.
Length = 2249
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 459 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 500
>DQ398890-1|ABD61606.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGASTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>AY113304-1|AAM29309.1| 818|Drosophila melanogaster AT27185p
protein.
Length = 818
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 365 CLRT*GFRRSAAASSGCEVRC 303
CL T FR+S GCEV C
Sbjct: 180 CLETVSFRKSNIGDKGCEVVC 200
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,689,639
Number of Sequences: 53049
Number of extensions: 251342
Number of successful extensions: 787
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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