Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1101
(329 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 95 9e-21
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 95 2e-20
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 95 2e-20
03_01_0034 + 318432-318825,318902-319851 91 1e-19
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 91 2e-19
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 89 8e-19
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 88 2e-18
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 83 5e-17
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 48 1e-06
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 41 2e-04
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 40 5e-04
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 40 6e-04
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 40 6e-04
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 29 1.2
11_06_0703 + 26444128-26446215,26446525-26447226 28 1.5
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 28 1.5
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 27 3.6
10_01_0047 - 656357-656766,657061-657226,657333-657515,657628-65... 27 3.6
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 27 3.6
02_04_0114 + 19879468-19880671,19882007-19882179,19882265-198826... 27 3.6
05_01_0170 + 1180168-1180367,1181538-1181598,1181657-1181659,118... 26 6.2
02_03_0220 + 16545571-16545573,16545717-16545818,16545980-165460... 26 6.2
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 26 8.3
05_01_0558 - 4880811-4880996,4881098-4881178,4881247-4881393,488... 26 8.3
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 95.5 bits (227), Expect = 9e-21
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIGAKFWEVI DEHG+DATG Y+GDSDLQLERI
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERI 47
Score = 44.8 bits (101), Expect = 2e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEASGG+YVPRAV++DL
Sbjct: 48 NVYYNEASGGRYVPRAVLMDL 68
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 94.7 bits (225), Expect = 2e-20
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG YSGDSDLQLERI
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERI 47
Score = 44.8 bits (101), Expect = 2e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEASGG+YVPRAV++DL
Sbjct: 48 NVYYNEASGGRYVPRAVLMDL 68
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 94.7 bits (225), Expect = 2e-20
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG YSGDSDLQLERI
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERI 47
Score = 43.2 bits (97), Expect = 5e-05
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEASGG++VPRAV++DL
Sbjct: 48 NVYYNEASGGRFVPRAVLMDL 68
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 91.5 bits (217), Expect = 1e-19
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIGAKFWEV+ EHGIDATG Y GDSDLQLER+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERV 47
Score = 39.5 bits (88), Expect = 6e-04
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEAS G++VPRAV++DL
Sbjct: 48 NVYYNEASCGRFVPRAVLMDL 68
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 91.1 bits (216), Expect = 2e-19
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIGAKFWEV+ DEHGID TG Y+G+SDLQLER+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERV 47
Score = 39.5 bits (88), Expect = 6e-04
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEAS G++VPRAV++DL
Sbjct: 48 NVYYNEASCGRFVPRAVLMDL 68
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 89.0 bits (211), Expect = 8e-19
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIG+KFWEV+ DEHGID TG Y+G SDLQLER+
Sbjct: 181 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERV 227
Score = 39.5 bits (88), Expect = 6e-04
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEAS G++VPRAV++DL
Sbjct: 228 NVYYNEASCGRFVPRAVLMDL 248
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 87.8 bits (208), Expect = 2e-18
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIG+KFWEV+ DEHGID TG Y G SDLQLER+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERV 47
Score = 39.5 bits (88), Expect = 6e-04
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEAS G++VPRAV++DL
Sbjct: 48 NVYYNEASCGRFVPRAVLMDL 68
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 83.0 bits (196), Expect = 5e-17
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIGAKFWEVI EHG+D TG Y+G S QLERI
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERI 47
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/21 (76%), Positives = 21/21 (100%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVY+NEASGG++VPRAV++DL
Sbjct: 48 NVYFNEASGGRHVPRAVLMDL 68
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 48.4 bits (110), Expect = 1e-06
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1
Query: 118 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 216
REI+ IQ GQCGNQIG +FW+ + EHGI G
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDG 35
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
+V++ +A Y+PRA++VDL
Sbjct: 49 DVFFYQADDQHYIPRALLVDL 69
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 41.1 bits (92), Expect = 2e-04
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 234
MREI+ I GQ G Q+G WE+ EHGI+ G D+
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDT 40
Score = 31.5 bits (68), Expect = 0.17
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
N +++E GK+VPRA+ VDL
Sbjct: 50 NTFFSETGAGKHVPRAIFVDL 70
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 39.9 bits (89), Expect = 5e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 231
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
N +++E GK+VPRAV VDL
Sbjct: 50 NTFFSETGAGKHVPRAVFVDL 70
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 39.5 bits (88), Expect = 6e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 231
MRE + I GQ G Q+G WE+ EHGI A G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSD 39
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
N +++E GK+VPRAV VDL
Sbjct: 50 NTFFSETGAGKHVPRAVFVDL 70
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 39.5 bits (88), Expect = 6e-04
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 234
MREI+ I GQ G Q+G WE+ EHGI G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRDA 40
Score = 32.3 bits (70), Expect = 0.095
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
N +++E S GK+VPRA+ VDL
Sbjct: 110 NTFFSETSSGKHVPRALFVDL 130
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 151 GNQIGAKFWEVISDEHG--IDATGAYSGDSDLQLERI 255
G+Q +KFW+ + +E G ++ + AY +D Q ER+
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERV 576
>11_06_0703 + 26444128-26446215,26446525-26447226
Length = 929
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Frame = -3
Query: 240 QVGVAAVSTRGVNAVLVRDY----FPELCSDLIPALTRLDVDDFP 118
++ +AA++ G + V + FP LC ++P+L RLD+D+ P
Sbjct: 776 EISLAAMNEGGEDGTTVTEKGEASFPRLC--VLPSLKRLDIDNCP 818
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 151 GNQIGAKFWEVISDEHG--IDATGAYSGDSDLQLERI 255
G+Q +KFW+ + +E G ++ + AY +D Q ER+
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERV 367
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFW 177
MRE V +Q G N +G+ FW
Sbjct: 1 MREAVTVQVGGFANYVGSHFW 21
>10_01_0047 -
656357-656766,657061-657226,657333-657515,657628-657849
Length = 326
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -3
Query: 273 LRYSRHYAFKL--QVGVAAVSTRGVNAVLVRDYFPELCSDL 157
+ YS Y F L V V ++TRG L D++ +C D+
Sbjct: 1 MEYSYSYRFMLVCSVLVLCLNTRGARCQLSDDFYDYICPDV 41
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFW 177
MRE V +Q G N +G+ FW
Sbjct: 1 MREAVTVQVGGFANYVGSHFW 21
>02_04_0114 +
19879468-19880671,19882007-19882179,19882265-19882605,
19882698-19882977,19883070-19883267,19883380-19883652
Length = 822
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -3
Query: 279 LKLRYSRHYAFKLQVGVAAVSTRGVNAVLVRDYFPELCSDLIP---ALTRLDVD 127
LK RY H+ K+Q + + + + FP+ DLI + RL +D
Sbjct: 372 LKQRYEEHHGLKIQDAAIVAAAQLADRYITGRQFPDKAIDLIDEACSTVRLKID 425
>05_01_0170 +
1180168-1180367,1181538-1181598,1181657-1181659,
1182396-1182443,1182979-1184595
Length = 642
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 2 LL*ENHCIFILIFFLHDQILESVYLIFDSGGSKFLVQS*GKSS 130
LL + CI L+FFLH S+++ F+ SK + GK S
Sbjct: 39 LLASSFCIASLLFFLHSLFHVSLFIWFEE--SKVSSEGFGKGS 79
>02_03_0220 +
16545571-16545573,16545717-16545818,16545980-16546008,
16549421-16553036
Length = 1249
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 325 SRLKSTITARGTYLPPEASL 266
SR+ ST +RG +LPP SL
Sbjct: 58 SRITSTKRSRGNFLPPNRSL 77
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 237 VGVAAVSTRGVNAVLVRDYFPELCSDLIPALTRLDVDDFPHD 112
+ A + + L R F ELCSDL+ L R VD+ D
Sbjct: 263 ITATADGPKHIETTLTRAKFEELCSDLLDRL-RTPVDNALRD 303
>05_01_0558 -
4880811-4880996,4881098-4881178,4881247-4881393,
4881985-4882029,4882370-4883134
Length = 407
Score = 25.8 bits (54), Expect = 8.3
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 279 LKLRYSRHYAFKLQVGVAAVSTRGVNAVLVRDYFPELCSDLIPA-LTRLDVDDFPHDCTK 103
+KL ++ + K Q+ VA+ + + RD+ P LC ++ A L + + D D +
Sbjct: 308 IKLLIAQMHVVKGQLDVASEKLQNLINEDPRDFRPHLCQGIVYALLDKKEEADELFDTYR 367
Query: 102 NLEPPE 85
+L P E
Sbjct: 368 SLVPDE 373
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,956,578
Number of Sequences: 37544
Number of extensions: 193088
Number of successful extensions: 506
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 447336660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -