Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1101
(329 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 100 2e-22
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 95 1e-20
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 95 1e-20
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 92 1e-19
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 89 7e-19
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 88 2e-18
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 81 2e-16
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 81 2e-16
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 43 6e-05
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 43 6e-05
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 41 2e-04
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 41 2e-04
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 41 2e-04
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 41 2e-04
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 40 3e-04
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 40 3e-04
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 39 7e-04
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 39 0.001
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 39 0.001
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 39 0.001
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 39 0.001
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 38 0.001
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 38 0.002
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 37 0.003
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 37 0.003
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 31 0.15
Z72502-13|CAA96586.2| 439|Caenorhabditis elegans Hypothetical p... 27 2.4
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 27 2.4
Z77133-3|CAB00868.2| 149|Caenorhabditis elegans Hypothetical pr... 26 5.5
AL110477-20|CAB76740.3| 728|Caenorhabditis elegans Hypothetical... 26 5.5
AF003137-9|AAB93646.3| 883|Caenorhabditis elegans Hypothetical ... 26 5.5
Z83230-5|CAB05745.1| 304|Caenorhabditis elegans Hypothetical pr... 26 7.3
AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical ... 26 7.3
AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical ... 26 7.3
AF016421-7|AAO12430.1| 413|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 100 bits (240), Expect = 2e-22
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREIVHIQAGQCGNQIGAKFWEVISDEHGID TGAY+GDSDLQLERI
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERI 47
Score = 45.2 bits (102), Expect = 1e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEASGGKYVPRA +VDL
Sbjct: 48 NVYYNEASGGKYVPRACLVDL 68
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 94.7 bits (225), Expect = 1e-20
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLERI
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERI 47
Score = 40.7 bits (91), Expect = 2e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEA KYVPRAV+VDL
Sbjct: 48 NVYYNEAGSNKYVPRAVLVDL 68
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 94.7 bits (225), Expect = 1e-20
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLERI
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERI 47
Score = 40.7 bits (91), Expect = 2e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEA KYVPRAV+VDL
Sbjct: 48 NVYYNEAGSNKYVPRAVLVDL 68
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREIVH+QAGQCGNQIGAKFWEVISDEHGI G Y G+SDLQLERI
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERI 47
Score = 46.0 bits (104), Expect = 6e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEA+GGKYVPRAV+VDL
Sbjct: 48 NVYYNEANGGKYVPRAVLVDL 68
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 89.0 bits (211), Expect = 7e-19
Identities = 38/47 (80%), Positives = 42/47 (89%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G+SDLQLERI
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERI 47
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
+VYYNEA+ GKYVPRAV+VDL
Sbjct: 48 DVYYNEANNGKYVPRAVLVDL 68
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 87.8 bits (208), Expect = 2e-18
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G++DLQLERI
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERI 47
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
+VYYNEA+ GKYVPRAV+VDL
Sbjct: 48 DVYYNEANNGKYVPRAVLVDL 68
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 81.0 bits (191), Expect = 2e-16
Identities = 33/56 (58%), Positives = 43/56 (76%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERIMSTITKLQG 282
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI S +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
Score = 34.3 bits (75), Expect = 0.021
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 261 YYNEASGGKYVPRAVMVDLSLE 326
YY E G KYVPRA++VDL E
Sbjct: 50 YYKEMEGRKYVPRAILVDLDPE 71
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 81.0 bits (191), Expect = 2e-16
Identities = 33/56 (58%), Positives = 43/56 (76%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERIMSTITKLQG 282
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI S +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
Score = 34.3 bits (75), Expect = 0.021
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 261 YYNEASGGKYVPRAVMVDLSLE 326
YY E G KYVPRA++VDL E
Sbjct: 50 YYKEMEGRKYVPRAILVDLDPE 71
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 42.7 bits (96), Expect = 6e-05
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 124 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 240
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 42.7 bits (96), Expect = 6e-05
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 124 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 240
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 41.1 bits (92), Expect = 2e-04
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 249
MREIV I GQ G QIG WE+ EHGI G D+ +E
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVE 45
Score = 32.3 bits (70), Expect = 0.084
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 249 THNVYYNEASGGKYVPRAVMVDL 317
++N +++E GK+VPRA+ VDL
Sbjct: 48 SYNTFFSETPSGKHVPRAIFVDL 70
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 240
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
Score = 30.7 bits (66), Expect = 0.26
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
+ +++E G++VPRAVMVDL
Sbjct: 50 STFFSETGSGRHVPRAVMVDL 70
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 240
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
Score = 30.7 bits (66), Expect = 0.26
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
+ +++E G++VPRAVMVDL
Sbjct: 50 STFFSETGSGRHVPRAVMVDL 70
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 240
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
Score = 30.7 bits (66), Expect = 0.26
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
+ +++E G++VPRAVMVDL
Sbjct: 50 STFFSETGSGRHVPRAVMVDL 70
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 231
MRE++ I GQ G QIG WE+ EHGI G D
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSD 39
Score = 27.5 bits (58), Expect = 2.4
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 261 YYNEASGGKYVPRAVMVDL 317
++++ G+YVPR++ VDL
Sbjct: 50 FFSDTGNGRYVPRSIFVDL 68
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 231
MRE++ I GQ G QIG WE+ EHGI G D
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSD 39
Score = 27.5 bits (58), Expect = 2.4
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 261 YYNEASGGKYVPRAVMVDL 317
++++ G+YVPR++ VDL
Sbjct: 50 FFSDTGNGRYVPRSIFVDL 68
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 39.1 bits (87), Expect = 7e-04
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +1
Query: 118 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 240
RE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 41
Score = 30.7 bits (66), Expect = 0.26
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
+ +++E G++VPRAVMVDL
Sbjct: 49 STFFSETGSGRHVPRAVMVDL 69
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 216
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
Score = 27.5 bits (58), Expect = 2.4
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 261 YYNEASGGKYVPRAVMVDL 317
++++ G+YVPR++ VDL
Sbjct: 50 FFSDTGSGRYVPRSIFVDL 68
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 216
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
Score = 27.5 bits (58), Expect = 2.4
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 261 YYNEASGGKYVPRAVMVDL 317
++++ G+YVPR++ VDL
Sbjct: 50 FFSDTGNGRYVPRSIFVDL 68
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 216
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
Score = 27.5 bits (58), Expect = 2.4
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 261 YYNEASGGKYVPRAVMVDL 317
++++ G+YVPR++ VDL
Sbjct: 50 FFSDTGSGRYVPRSIFVDL 68
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 216
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
Score = 27.5 bits (58), Expect = 2.4
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 261 YYNEASGGKYVPRAVMVDL 317
++++ G+YVPR++ VDL
Sbjct: 50 FFSDTGNGRYVPRSIFVDL 68
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 38.3 bits (85), Expect = 0.001
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 118 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS--DLQLERIMSTITKLQG 282
RE++ I GQ G QIG WE+ EHGI G + D D + E I + + G
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAG 64
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 249 THNVYYNEASGGKYVPRAVMVDL 317
T N ++ E +GGK+VPR + VDL
Sbjct: 54 TINTFFAETAGGKHVPRCLFVDL 76
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 118 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 216
RE V I GQ G QIG WE+ EHG+D G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAG 38
Score = 28.7 bits (61), Expect = 1.0
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3
Query: 261 YYNEASGGKYVPRAVMVDL 317
+++E+ GK+VPRA+ VDL
Sbjct: 55 FFSESMNGKHVPRAIYVDL 73
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGI 204
MRE++ I GQ G QIG WE+ EHGI
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGI 30
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 118 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 249
RE++ I GQ G Q+G WE+ EHGI G + + L ++
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVD 50
Score = 34.3 bits (75), Expect = 0.021
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDLSLEP 329
N +++E GK+VPRA+MVDL P
Sbjct: 55 NTFFSETMAGKHVPRAIMVDLEPTP 79
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 249 THNVYYNEASGGKYVPRAVMVDL 317
T N ++ E +GGK+VPR + VDL
Sbjct: 26 TINTFFAETAGGKHVPRCLFVDL 48
>Z72502-13|CAA96586.2| 439|Caenorhabditis elegans Hypothetical
protein C08B6.3 protein.
Length = 439
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = -3
Query: 261 RHYAFKLQVGVAAVSTRGVNAVLVRDYFPELCSDLIPALTRLDVDDFPHDCTK 103
R Y F ++ ++ + A+L YF E +L+P+ + +F +C K
Sbjct: 89 RAYEFDVEYSISITTPGKYKAILYCRYFDESGVELLPSFQSYNFPEFVVNCQK 141
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 71 YLIFDSGGSKFLVQS*GKSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSL 247
Y I D SK+++Q ++ + +R + S +TP VL A T C++
Sbjct: 64 YRILDQNESKYILQQQSAAAIEEKKGTLLRRKSSKKLIEPLPMIITPPVLMARTQCCAV 122
>Z77133-3|CAB00868.2| 149|Caenorhabditis elegans Hypothetical
protein K03A11.5 protein.
Length = 149
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 126 DFPHDCTKNLEPPESN 79
D+P+D KNL P ESN
Sbjct: 42 DYPYDICKNLYPRESN 57
>AL110477-20|CAB76740.3| 728|Caenorhabditis elegans Hypothetical
protein Y113G7B.18 protein.
Length = 728
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 204 NAVLVRDYFPELCSDLIPALTRLDV 130
N +L+RD F +C+D I RL +
Sbjct: 396 NTLLLRDVFKTICTDAIKLRNRLSI 420
>AF003137-9|AAB93646.3| 883|Caenorhabditis elegans Hypothetical
protein C27A12.9 protein.
Length = 883
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 160 IGAKFWEVISDEHGIDATGAYSGDSDLQL 246
IG + SD+HG+ +TG + G+S+ ++
Sbjct: 245 IGQTIETMKSDDHGMTSTGDHGGESENEI 273
>Z83230-5|CAB05745.1| 304|Caenorhabditis elegans Hypothetical
protein F56A8.5 protein.
Length = 304
Score = 25.8 bits (54), Expect = 7.3
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +1
Query: 13 KSLHFYINFFFT*SNSRKCLFNIRF 87
K+L+ Y+ FF N+ +C+ ++F
Sbjct: 40 KTLNLYVEFFSVEINNNRCVIRLKF 64
>AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical
protein F53A10.2c protein.
Length = 811
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = -1
Query: 266 IVDIMRSSCRSESPL*APVASMPCSSEITSQNFAPI*FP 150
I +I+ ++ ++ P + +A + C EIT++ F+P+ FP
Sbjct: 309 IHEIVSATALADRPSASRMAKLLCE-EITTEQFSPVAFP 346
>AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical
protein F53A10.2a protein.
Length = 742
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = -1
Query: 266 IVDIMRSSCRSESPL*APVASMPCSSEITSQNFAPI*FP 150
I +I+ ++ ++ P + +A + C EIT++ F+P+ FP
Sbjct: 240 IHEIVSATALADRPSASRMAKLLCE-EITTEQFSPVAFP 277
>AF016421-7|AAO12430.1| 413|Caenorhabditis elegans Hypothetical
protein F44E7.5a protein.
Length = 413
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 183 YFPELCSDLIPALTRLDVDDFPHDCTKNLEPPES 82
++P+L + L +D++ F H TK + P S
Sbjct: 180 FWPKLKGSKVETLDLMDIESFHHTSTKEFKLPLS 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,084,740
Number of Sequences: 27780
Number of extensions: 155165
Number of successful extensions: 437
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -