Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1101
         (329 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.31 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.31 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   2.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   2.2  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   2.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.6 bits (51), Expect = 0.31
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -3

Query: 252 AFKLQVGVAAVSTRGVNAVLVRDYFPELCSDLIPALTRLDVDDF 121
           A+K+ V V   ++RG  AVL R   P    DL+  ++ L    F
Sbjct: 131 AYKVDVEVIGGASRGCTAVL-RCVVPSFVKDLVRVVSWLQEPSF 173


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.6 bits (51), Expect = 0.31
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -3

Query: 252 AFKLQVGVAAVSTRGVNAVLVRDYFPELCSDLIPALTRLDVDDF 121
           A+K+ V V   ++RG  AVL R   P    DL+  ++ L    F
Sbjct: 131 AYKVDVEVIGGASRGCTAVL-RCVVPSFVKDLVRVVSWLQEPSF 173


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 38  FFLHDQILESVYL 76
           FFLH Q+L   YL
Sbjct: 259 FFLHKQVLNRYYL 271


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 38  FFLHDQILESVYL 76
           FFLH Q+L   YL
Sbjct: 259 FFLHKQVLNRYYL 271


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 249 THNVYYNEAS 278
           THN+YYN  S
Sbjct: 261 THNLYYNSPS 270


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,302
Number of Sequences: 438
Number of extensions: 2164
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)