Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1101
(329 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 90 3e-19
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 90 3e-19
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 89 5e-19
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 89 7e-19
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 89 9e-19
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 87 2e-18
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 87 2e-18
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 86 6e-18
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 85 8e-18
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 48 2e-06
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 48 2e-06
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 42 1e-04
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 40 3e-04
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 40 3e-04
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 40 4e-04
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 40 4e-04
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 38 0.002
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 38 0.002
At4g37190.1 68417.m05265 expressed protein 30 0.33
At2g26850.1 68415.m03221 F-box family protein contains Pfam PF00... 29 0.57
At5g55500.1 68418.m06912 beta-(1,2)-xylosyltransferase (XYLT) id... 29 0.75
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 28 1.7
At4g17750.1 68417.m02650 heat shock factor protein 1 (HSF1) / he... 27 3.0
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 4.0
At3g09000.1 68416.m01053 proline-rich family protein 26 7.0
At2g39000.2 68415.m04795 GCN5-related N-acetyltransferase (GNAT)... 26 7.0
At2g39000.1 68415.m04794 GCN5-related N-acetyltransferase (GNAT)... 26 7.0
At5g53510.1 68418.m06650 oligopeptide transporter OPT family pro... 25 9.3
At1g63430.1 68414.m07173 leucine-rich repeat transmembrane prote... 25 9.3
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 90.2 bits (214), Expect = 3e-19
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLERI
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERI 47
Score = 39.5 bits (88), Expect = 5e-04
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEAS G++VPRAV++DL
Sbjct: 48 NVYYNEASCGRFVPRAVLMDL 68
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 90.2 bits (214), Expect = 3e-19
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLERI
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERI 47
Score = 39.5 bits (88), Expect = 5e-04
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEAS G++VPRAV++DL
Sbjct: 48 NVYYNEASCGRFVPRAVLMDL 68
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 89.4 bits (212), Expect = 5e-19
Identities = 40/47 (85%), Positives = 41/47 (87%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDS LQLERI
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERI 47
Score = 42.3 bits (95), Expect = 8e-05
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
+VY+NEASGGKYVPRAV++DL
Sbjct: 48 DVYFNEASGGKYVPRAVLMDL 68
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 89.0 bits (211), Expect = 7e-19
Identities = 40/48 (83%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD-SDLQLERI 255
MREI+HIQ GQCGNQIG+KFWEVI DEHGID+TG YSGD +DLQLERI
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERI 48
Score = 44.8 bits (101), Expect = 1e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEASGG+YVPRAV++DL
Sbjct: 49 NVYYNEASGGRYVPRAVLMDL 69
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 88.6 bits (210), Expect = 9e-19
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIG+KFWEV+ DEHGID TG Y G+SDLQLER+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERV 47
Score = 40.7 bits (91), Expect = 2e-04
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEAS G+YVPRA+++DL
Sbjct: 48 NVYYNEASCGRYVPRAILMDL 68
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 87.4 bits (207), Expect = 2e-18
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIGAKFWEV+ EHGID+TG Y G++DLQLER+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERV 47
Score = 39.5 bits (88), Expect = 5e-04
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEAS G++VPRAV++DL
Sbjct: 48 NVYYNEASCGRFVPRAVLMDL 68
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 87.4 bits (207), Expect = 2e-18
Identities = 38/48 (79%), Positives = 43/48 (89%), Gaps = 1/48 (2%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS-DLQLERI 255
MREI+H+Q GQCGNQIG+KFWEVI DEHG+D TG Y+GDS DLQLERI
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERI 48
Score = 44.8 bits (101), Expect = 1e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEASGG+YVPRAV++DL
Sbjct: 49 NVYYNEASGGRYVPRAVLMDL 69
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 85.8 bits (203), Expect = 6e-18
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIG+KFWEV++ EHGID TG Y GDS+LQLER+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERV 47
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVYYNEAS G+YVPRAV++DL
Sbjct: 48 NVYYNEASCGRYVPRAVLMDL 68
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 85.4 bits (202), Expect = 8e-18
Identities = 38/47 (80%), Positives = 40/47 (85%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 255
MREI+HIQ GQCGNQIGAKFWEVI EHGID TG GD+DLQLERI
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERI 47
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
NVY+NEASGGKYVPRAV++DL
Sbjct: 48 NVYFNEASGGKYVPRAVLMDL 68
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 48.0 bits (109), Expect = 2e-06
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +1
Query: 118 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 216
REI+ +Q GQCGNQIG +FW+ + EHGI G
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDG 35
Score = 25.4 bits (53), Expect = 9.3
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
+V++ +A Y+PRA+++DL
Sbjct: 49 DVFFYQADDQHYIPRALLIDL 69
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 48.0 bits (109), Expect = 2e-06
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +1
Query: 118 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 216
REI+ +Q GQCGNQIG +FW+ + EHGI G
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDG 35
Score = 25.4 bits (53), Expect = 9.3
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
+V++ +A Y+PRA+++DL
Sbjct: 49 DVFFYQADDQHYIPRALLIDL 69
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 41.9 bits (94), Expect = 1e-04
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 234
MREI+ I GQ G Q+G WE+ EHGI G DS
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDS 40
Score = 30.7 bits (66), Expect = 0.25
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
N +++E S G++VPRAV +DL
Sbjct: 50 NTFFSETSSGQHVPRAVFLDL 70
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 234
MREI+ I GQ G Q+G WE+ EHGI G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT 40
Score = 31.9 bits (69), Expect = 0.11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
N +++E GK+VPRAV VDL
Sbjct: 50 NTFFSETGAGKHVPRAVFVDL 70
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 234
MREI+ I GQ G Q+G WE+ EHGI G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT 40
Score = 31.9 bits (69), Expect = 0.11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
N +++E GK+VPRAV VDL
Sbjct: 50 NTFFSETGAGKHVPRAVFVDL 70
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 231
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
Score = 31.9 bits (69), Expect = 0.11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
N +++E GK+VPRAV VDL
Sbjct: 50 NTFFSETGAGKHVPRAVFVDL 70
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 231
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
Score = 31.9 bits (69), Expect = 0.11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
N +++E GK+VPRAV VDL
Sbjct: 50 NTFFSETGAGKHVPRAVFVDL 70
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 231
MRE + I GQ G Q+G WE+ EHGI G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
Score = 31.9 bits (69), Expect = 0.11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
N +++E GK+VPRAV VDL
Sbjct: 50 NTFFSETGAGKHVPRAVFVDL 70
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 231
MRE + I GQ G Q+G WE+ EHGI G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
Score = 31.9 bits (69), Expect = 0.11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 255 NVYYNEASGGKYVPRAVMVDL 317
N +++E GK+VPRAV VDL
Sbjct: 50 NTFFSETGAGKHVPRAVFVDL 70
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.3 bits (65), Expect = 0.33
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 115 MREIVHIQAGQCGNQIGAKFW 177
MREIV IQ G+ N +G+ FW
Sbjct: 1 MREIVTIQVGEFANFVGSHFW 21
>At2g26850.1 68415.m03221 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 29.5 bits (63), Expect = 0.57
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 177 PELCSDLIPALTRLDVDDFPHDCTKNLEPP 88
P+L S ++ ++ LD+ D P DC L PP
Sbjct: 50 PDLASPVLGKMSILDLPDLPLDCILELLPP 79
>At5g55500.1 68418.m06912 beta-(1,2)-xylosyltransferase (XYLT)
identical to SP|Q9LDH0
Length = 534
Score = 29.1 bits (62), Expect = 0.75
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Frame = -3
Query: 276 KLRYSRHYAFKLQVGVAAVSTRGVNAVLVRDYFPE------LCSDLIPALTRLDVDDFPH 115
+L + RH F G +AVS R VN ++ +Y E DL+ ++ +D +DF
Sbjct: 171 RLGFKRHRRFGGGEGGSAVSRRLVNDEMLNEYMQEGGIDRHTMRDLVASIRAVDTNDFV- 229
Query: 114 DCTKNLEPP 88
C + +E P
Sbjct: 230 -CEEWVEEP 237
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 121 EIVHIQAGQCGNQIGAKFWEVISD 192
+I++ A + G+ GA FWEVIS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At4g17750.1 68417.m02650 heat shock factor protein 1 (HSF1) / heat
shock transcription factor 1 (HSTF1) identical to heat
shock transcription factor 1 (HSF1) SP:P41151 from
[Arabidopsis thaliana] ;contains Pfam profile: PF00447
HSF-type DNA-binding domain
Length = 495
Score = 27.1 bits (57), Expect = 3.0
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = -3
Query: 321 GSSPPSQLAGRTC----PLKLRYSRHYAFKLQVGVAAVSTRGVNAVLVRDYFPELCSDLI 154
G S P+Q++G T P+ S+ YA + G + L PE + I
Sbjct: 318 GFSSPNQVSGVTLQEVLPITSGQSQAYA-SVPSGQPLSYLPSTSTSLPDTIMPE--TSQI 374
Query: 153 PALTRLDVDDFPHDCTKNLEPPESNI 76
P LTR ++DFP T+N E N+
Sbjct: 375 PQLTRESINDFP---TENFMDTEKNV 397
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 136 QAGQCGNQIGAKFWEVISDEHGIDATGAYSG 228
QA G IG ++W +IS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +2
Query: 122 KSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCS 244
K TS AG+R SSG TS TP + TPT S
Sbjct: 133 KPQTSSSSVAGLRRPSSSGSSRSTSRPATP-TRRSTTPTTS 172
>At2g39000.2 68415.m04795 GCN5-related N-acetyltransferase (GNAT)
family protein contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 228
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = -3
Query: 270 RYSRHYAFKLQVGVAAVSTRGVNAVLVRDYFPELCSDLIPALTRLD 133
R RH +F + + +++ NA + D FP + +++ RL+
Sbjct: 39 RRRRHSSFSISQAPSQINSGACNASQIVDLFPAVSPEIVVREARLE 84
>At2g39000.1 68415.m04794 GCN5-related N-acetyltransferase (GNAT)
family protein contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 291
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = -3
Query: 270 RYSRHYAFKLQVGVAAVSTRGVNAVLVRDYFPELCSDLIPALTRLD 133
R RH +F + + +++ NA + D FP + +++ RL+
Sbjct: 39 RRRRHSSFSISQAPSQINSGACNASQIVDLFPAVSPEIVVREARLE 84
>At5g53510.1 68418.m06650 oligopeptide transporter OPT family
protein similar to SP|P40900 Sexual differentiation
process protein isp4 {Schizosaccharomyces pombe},
oligopeptide transporter Opt1p [Candida albicans]
GI:2367386; contains Pfam profile PF03169: OPT
oligopeptide transporter protein
Length = 741
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 126 DFPHDCTKNLEPPESNIK*TLSRI 55
D PH C K+L PP+S + R+
Sbjct: 556 DIPHLCDKSLLPPDSEWTCPMDRV 579
>At1g63430.1 68414.m07173 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profiles: PF00069
Eukaryotic protein kinase domain, PF00560 Leucine Rich
Repeat; contains 1 predicted transmembrane domain
Length = 664
Score = 25.4 bits (53), Expect = 9.3
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +1
Query: 13 KSLHFYINFFFT*SNSRKCLFNIRFGGFQIFSAIMREIVHIQAGQCGN 156
K F NFF N KCL N+ FQ +++ H + QC N
Sbjct: 210 KVADFSYNFFV--GNIPKCLENLPRTSFQGNCMQNKDLKHRSSSQCAN 255
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,641,177
Number of Sequences: 28952
Number of extensions: 146605
Number of successful extensions: 378
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 380568784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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