Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1098
         (399 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    27   0.052
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   3.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   4.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   4.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   4.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   4.5  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 27.5 bits (58), Expect = 0.052
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -2

Query: 245 TPSAANVTSTRSPRDSRP*KPADIFAWKLFQHSENCSSDAMIATTRRGT 99
           +P+ A+ T T S   S    PA I ++ L QH   CSS   + +T   T
Sbjct: 202 SPTIASATYTNSANSSIW-SPASIDSFTLEQHRSWCSSSQPVLSTTNST 249


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = -2

Query: 176 IFAWKLFQHSENCSSDAMIATTRRGTYPKLCTYNSGRRNI*KKYNSMFP 30
           I+ W+     E C+  +   +    TYP L T     R +  KY +++P
Sbjct: 29  IWYWQCNTDEETCTRISSTVSRNTDTYPTLETC----RLVCGKYGALWP 73


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 303 SKXIQHNIR*YFKDVVILH*ETY 371
           S+ + H IR  FK++ +L   TY
Sbjct: 269 SEIVDHGIRFSFKEIGLLVDSTY 291


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 303 SKXIQHNIR*YFKDVVILH*ETY 371
           S+ + H IR  FK++ +L   TY
Sbjct: 269 SEIVDHGIRFSFKEIGLLVDSTY 291


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 303 SKXIQHNIR*YFKDVVILH*ETY 371
           S+ + H IR  FK++ +L   TY
Sbjct: 269 SEIVDHGIRFSFKEIGLLVDSTY 291


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 41  SYIFFKCFSYRNYKYK 88
           SY+ F  F  RN +YK
Sbjct: 145 SYLLFDYFVQRNQEYK 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,799
Number of Sequences: 336
Number of extensions: 1885
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)