Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1098
         (399 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0027 - 195321-195932,197206-197415                               29   1.4  
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119...    27   7.2  
04_04_0489 + 25600543-25601368,25601441-25602282                       27   7.2  
01_05_0604 - 23583244-23584989                                         27   7.2  
07_03_0351 + 17082571-17083087,17083135-17083148                       26   9.5  

>08_01_0027 - 195321-195932,197206-197415
          Length = 273

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 242 GFIATHKLVLSVCSPYFQEMF 304
           G +  HK +L+ CSP F+ MF
Sbjct: 117 GVLKAHKAILASCSPVFESMF 137


>11_06_0458 +
           23808402-23808469,23808800-23809684,23810011-23811961,
           23812210-23812285,23813064-23813072,23813243-23813335,
           23813578-23813581,23813780-23814703,23814926-23815909,
           23816073-23816118,23816376-23816951,23817253-23817798,
           23817820-23818416
          Length = 2252

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -2

Query: 170 AWKLFQHS--ENCSSDAMIATTRRGTYPKLCT 81
           AWK  ++S  EN     ++ TTR GT  K C+
Sbjct: 331 AWKTIRYSLLENNCGSRILVTTRIGTVAKSCS 362


>04_04_0489 + 25600543-25601368,25601441-25602282
          Length = 555

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 50  FFKCFSYRNYKYKA*DRFHVESSLSW 127
           FFK + Y NY+Y   +R  ++ +++W
Sbjct: 487 FFKKWMYANYRYLMGERPRLDEAMAW 512


>01_05_0604 - 23583244-23584989
          Length = 581

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 50  FFKCFSYRNYKYKA*DRFHVESSLSW 127
           FFK + Y NY+Y   +R  ++ +++W
Sbjct: 513 FFKKWMYANYRYLMGERPRLDEAMAW 538


>07_03_0351 + 17082571-17083087,17083135-17083148
          Length = 176

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = -2

Query: 278 ILIELIYVLQ*TPSAANVTSTRSPRDSRP*KPADIFAWKLFQHSENCSS 132
           +L+ L+++L    + A  T    P + +P +  D+F  +LF +  N S+
Sbjct: 9   LLLLLLFLLAAATATATATGNALPPEPKPARWPDVFHARLFTNLTNHSA 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,189,574
Number of Sequences: 37544
Number of extensions: 196261
Number of successful extensions: 394
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)