Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1098
         (399 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    31   0.30 
AC006830-2|AAK68611.2|  293|Caenorhabditis elegans Serpentine re...    28   2.8  
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ...    27   5.0  
U23454-6|AAC46521.1|  192|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr...    26   8.7  
Z34800-3|CAA84322.2|  722|Caenorhabditis elegans Hypothetical pr...    26   8.7  
Z34800-2|CAA84324.2|  842|Caenorhabditis elegans Hypothetical pr...    26   8.7  

>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 31.1 bits (67), Expect = 0.30
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMF 304
           I  H++VLS CSPYF  MF
Sbjct: 67  INAHRVVLSACSPYFLSMF 85


>AC006830-2|AAK68611.2|  293|Caenorhabditis elegans Serpentine
           receptor, class sx protein40 protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 267 TNLCVAINPFGSQRYVYEIST 205
           +N+CV  N FG   Y+Y++ST
Sbjct: 154 SNICVLSNCFGDAYYLYKVST 174


>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
            protein Y38C9A.1 protein.
          Length = 1484

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 218  TRSPRDSRP*KPADIFAWKLFQHSENCSSDAM 123
            TRSP+  +P KP    ++  FQ+S + SS A+
Sbjct: 1362 TRSPQVQKPIKPTASRSFTSFQNSPSTSSSAL 1393


>U23454-6|AAC46521.1|  192|Caenorhabditis elegans Hypothetical
           protein C10A4.7 protein.
          Length = 192

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 148 LCWNNFHANMSAGFHGLLSRGDLVDVTL 231
           LCW + +AN++A F  LL+ G +   T+
Sbjct: 129 LCWEDENANVAAAFILLLASGTITFFTM 156


>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
           protein H02I12.1 protein.
          Length = 1319

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 73  PVGETFEKNITQCSQ 29
           P+GETF+K +  CS+
Sbjct: 602 PIGETFDKTLRSCSE 616


>Z34800-3|CAA84322.2|  722|Caenorhabditis elegans Hypothetical
           protein F45H7.2b protein.
          Length = 722

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 250 NKPLRQPTLRLRDLHATAGHESPLTYLRGNCSSIVKIVRPT 128
           N+ +  PT   +D H    H S LT +RG C+   + V+ T
Sbjct: 609 NETIGHPT---KDCHVARFHSSGLTEIRGACAIAERSVKCT 646


>Z34800-2|CAA84324.2|  842|Caenorhabditis elegans Hypothetical
           protein F45H7.2a protein.
          Length = 842

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 250 NKPLRQPTLRLRDLHATAGHESPLTYLRGNCSSIVKIVRPT 128
           N+ +  PT   +D H    H S LT +RG C+   + V+ T
Sbjct: 729 NETIGHPT---KDCHVARFHSSGLTEIRGACAIAERSVKCT 766


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,227,194
Number of Sequences: 27780
Number of extensions: 182256
Number of successful extensions: 359
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)