Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1098
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      43   1e-06
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      38   3e-05
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          38   4e-05
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.7  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   3.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   5.2  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   6.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.9  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   9.1  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 42.7 bits (96), Expect = 1e-06
 Identities = 14/29 (48%), Positives = 22/29 (75%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFKMXPTQHPIV 334
           +  H++VLS CSPYF+E+ K  P +HP++
Sbjct: 43  LKAHRVVLSACSPYFRELLKSTPCKHPVI 71



 Score = 39.5 bits (88), Expect = 1e-05
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +1

Query: 124 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEG 243
           M   + F L WNN+ +++++ F  L    D VDVTLA +G
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDG 40


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 38.3 bits (85), Expect = 3e-05
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 124 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 240
           M   + F L WNN+ +++++ F  L    D VDVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 37.9 bits (84), Expect = 4e-05
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +1

Query: 136 EQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLA 234
           + + L WNN+ +NM++ FH LL     VDVTLA
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLA 41



 Score = 36.3 bits (80), Expect = 1e-04
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFKMXPTQHPIV 334
           +  HK+VLS CS YFQ++    P +HP +
Sbjct: 47  LKAHKVVLSACSSYFQKLLLSNPCKHPTI 75


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 100 VPRRVVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTL 231
           V R +VA++ +   F +CW  FHA      +   S+    DV +
Sbjct: 283 VIRMLVAVVVA---FFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 101 FHVESSLSWRRTNNFHY 151
           +   +S SWR TNN  Y
Sbjct: 211 YDFRNSRSWRITNNLFY 227


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -2

Query: 143 NCSSDAMIATTRRGTYPKLCTYNS 72
           NC  D +    +RGT  + C + +
Sbjct: 479 NCDIDCINRVVQRGTKMQFCIFRT 502


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 122 SWRRTNNFHY 151
           SWR T+NF Y
Sbjct: 209 SWRITHNFFY 218


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 309 ILNIS*K*GEHT-DRTNLCVAINPFGSQRYVYEISTR 202
           +L+I+    EH+ D T  CVA NP    RY  ++  +
Sbjct: 673 LLSITNLAAEHSGDYT--CVAANPAAEVRYTAKLQVK 707


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +2

Query: 101 FHVESSLSWRRTNNFHYAGTIS 166
           F V   LS  R N F  A TIS
Sbjct: 236 FGVSEDLSGDRINGFTVAQTIS 257


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,436
Number of Sequences: 438
Number of extensions: 2208
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)