Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1096
         (399 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    40   9e-04
Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    38   0.002
AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical ...    36   0.011
AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.      31   0.30 
AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.      31   0.30 
AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1 suppres...    31   0.30 
L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical pr...    30   0.70 
U23454-6|AAC46521.1|  192|Caenorhabditis elegans Hypothetical pr...    27   3.7  
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ...    27   5.0  
U80441-12|ABE73337.1|  147|Caenorhabditis elegans Hypothetical p...    27   6.5  
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr...    26   8.7  

>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 39.5 bits (88), Expect = 9e-04
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = +1

Query: 190 GLLSRGDLVDVTLAAEXV-IASTKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSAL 360
           GL +R  L DVTL      I + ++VLS CSPYF  MF  +M       + ++++    L
Sbjct: 48  GLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTL 107

Query: 361 RDLLQFMYPGEV 396
             L++F Y G +
Sbjct: 108 EALIEFCYTGAI 119


>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 38.3 bits (85), Expect = 0.002
 Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
 Frame = +1

Query: 184 FHGLLSRGDLVDVTLAAEX-VIASTKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHS 354
           F+ L S+  L DV L  E   +++ K++L+   PYF+ MF ++  +  +  + ++D+++ 
Sbjct: 41  FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYE 100

Query: 355 ALRDLLQFMYPGEV 396
            +  LL F Y GE+
Sbjct: 101 TVDALLSFAYTGEL 114


>AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical
           protein Y75B12B.4 protein.
          Length = 320

 Score = 35.9 bits (79), Expect = 0.011
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = +1

Query: 211 LVDVTLAAEXV-IASTKLVLSVCSPYFQEMFKMNPTQHPIVFLK--DVSHSALRDLLQFM 381
           L DV L  E   +   K VL+  S +FQ+MF  N  +     +K  DV+HS   DLL  +
Sbjct: 159 LTDVVLVLEGKHVHVGKQVLATSSQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLNVI 218

Query: 382 YP 387
           YP
Sbjct: 219 YP 220


>AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 31.1 bits (67), Expect = 0.30
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
 Frame = +1

Query: 112 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEXV-IASTKLVL 267
           + ++AS E   LC   F  +     H L  R       G   DV +  +    A+ + +L
Sbjct: 1   MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60

Query: 268 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYPGEV 396
           +  SPYF  +FK        + +   S       L +MY G V
Sbjct: 61  AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTV 103


>AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 31.1 bits (67), Expect = 0.30
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
 Frame = +1

Query: 112 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEXV-IASTKLVL 267
           + ++AS E   LC   F  +     H L  R       G   DV +  +    A+ + +L
Sbjct: 1   MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60

Query: 268 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYPGEV 396
           +  SPYF  +FK        + +   S       L +MY G V
Sbjct: 61  AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTV 103


>AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1
           suppressor/dio uptake defective/raf enhancer protein 1
           protein.
          Length = 909

 Score = 31.1 bits (67), Expect = 0.30
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
 Frame = +1

Query: 112 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEXV-IASTKLVL 267
           + ++AS E   LC   F  +     H L  R       G   DV +  +    A+ + +L
Sbjct: 1   MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60

Query: 268 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYPGEV 396
           +  SPYF  +FK        + +   S       L +MY G V
Sbjct: 61  AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTV 103


>L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical
           protein C50C3.8 protein.
          Length = 410

 Score = 29.9 bits (64), Expect = 0.70
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +1

Query: 244 IASTKLVLSVCSPYFQEMFK---MNPTQHPIVFLKDVSHSALRDLLQFMYPG 390
           I + + +L   SP F+ MF    M   Q   + ++D  + ++R +++FMY G
Sbjct: 230 IKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMYTG 281


>U23454-6|AAC46521.1|  192|Caenorhabditis elegans Hypothetical
           protein C10A4.7 protein.
          Length = 192

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 145 LCWNNFHANMSAGFHGLLSRGDLVDVTLAAEXVIASTKLV 264
           LCW + +AN++A F  LL+ G +   T+    +I   K+V
Sbjct: 129 LCWEDENANVAAAFILLLASGTITFFTMLT-FLILGVKIV 167


>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
            protein Y38C9A.1 protein.
          Length = 1484

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 215  TRSPRDSRP*KPADIFAWKLFQHSENCSSDAM 120
            TRSP+  +P KP    ++  FQ+S + SS A+
Sbjct: 1362 TRSPQVQKPIKPTASRSFTSFQNSPSTSSSAL 1393


>U80441-12|ABE73337.1|  147|Caenorhabditis elegans Hypothetical
           protein F27C1.13 protein.
          Length = 147

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +3

Query: 126 VGRTIFTMLEQFPR--KYVSGLSWPAVAWRSRRRN 224
           +GRTI T L+QF    KYV+  S P  A  S RRN
Sbjct: 95  MGRTIITSLDQFQHLGKYVASSSNPPKA--SLRRN 127


>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
           protein H02I12.1 protein.
          Length = 1319

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 70  PVGETFEKNITQCSQ 26
           P+GETF+K +  CS+
Sbjct: 602 PIGETFDKTLRSCSE 616


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,235,832
Number of Sequences: 27780
Number of extensions: 172338
Number of successful extensions: 355
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 354
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)