Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1095
         (528 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.9  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.9  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 162 KLVKNFQRLTHFL*YWRYKCSRHFFCHRIFSYITEWLQY 278
           KL K   +L H L +  YK ++ F    +F  I  W+ +
Sbjct: 110 KLHKLDNKLKHMLIWKSYKRTQIFITCELFFVILLWISF 148


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 113 AFVGCINFSQ*KL*VSKTCKKLSKV 187
           AF GC+   Q K      CK  SKV
Sbjct: 11  AFFGCVRAQQLKGNQEDPCKLKSKV 35


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 13/58 (22%), Positives = 27/58 (46%)
 Frame = +1

Query: 256 TLQSGFSIEGSYTISAPSITSGLLFGRSVISFQSNILTSVSESPVKIGPAVPEISNST 429
           T  +  +++   T+ +P+I    L       +Q +   + S+SP +I   V  ++N T
Sbjct: 303 TYSTWSTVQTPTTVMSPTINCWSLTSSPPPPYQISAQPTPSQSPNQIYQPVTNLTNLT 360


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -1

Query: 171 LQVLETYNFHCEKLMQPTNAHIEXDHTHINRC 76
           L ++ +Y+  C K  Q  N  +  D    N C
Sbjct: 200 LDLIGSYSCKCPKGFQGQNCELNVDDCKPNPC 231


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 225 VNIYIASIIRNELTFESFLQVLETYNFHC 139
           V+IY  S  RNE+  +  L   +  + +C
Sbjct: 49  VSIYSKSFHRNEIHIKIVLMFFKEASLYC 77


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 117 LLVALIFHNENYRFPKLVKNF 179
           ++ +L+F N   R+PK VK++
Sbjct: 96  VMASLLFLNLAKRWPKFVKDW 116


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 117 LLVALIFHNENYRFPKLVKNF 179
           ++ +L+F N   R+PK VK++
Sbjct: 96  VMASLLFLNLAKRWPKFVKDW 116



 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 176 VFYKFWKPIIFIVKN 132
           V Y  WK +IF + N
Sbjct: 514 VDYSLWKALIFQISN 528


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,729
Number of Sequences: 336
Number of extensions: 2540
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)