Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1095
         (528 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g27400.1 68418.m03271 expressed protein hypothetical proteins...    38   0.003
At3g50850.1 68416.m05568 expressed protein                             30   1.1  
At1g63855.3 68414.m07228 expressed protein                             29   1.9  
At1g63855.1 68414.m07229 expressed protein                             29   1.9  
At3g46290.1 68416.m05010 protein kinase, putative similar to rec...    29   2.6  
At1g08125.1 68414.m00891 Expressed protein                             29   2.6  
At3g42730.1 68416.m04462 Ulp1 protease family protein contains P...    28   4.5  
At4g24880.1 68417.m03560 expressed protein                             27   5.9  
At2g24200.1 68415.m02891 cytosol aminopeptidase identical to cyt...    27   5.9  

>At5g27400.1 68418.m03271 expressed protein hypothetical proteins -
           different species
          Length = 369

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = -2

Query: 341 TDLPNKRPDVILGADIVYDPSILKPLCNV 255
           ++L   RPD++LGAD++YDPS L  L  V
Sbjct: 249 SELSQYRPDIVLGADVIYDPSCLPHLLRV 277


>At3g50850.1 68416.m05568 expressed protein
          Length = 251

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -2

Query: 368 VKMLDWNEITDLPN--KRPDVILGADIVYDPSILKPLCNV*KYSVTE 234
           V  L W EI D+ +  +  D+IL +D+VY   + +PL    ++ + E
Sbjct: 146 VASLRWGEIDDVESLGQNVDLILASDVVYHVHLYEPLLKTLRFLLLE 192


>At1g63855.3 68414.m07228 expressed protein
          Length = 196

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = -2

Query: 359 LDWNEITDLP--NKRPDVILGADIVYDPS 279
           L W  + D P  + RP++ILGAD++YD S
Sbjct: 113 LTWG-VWDAPILDLRPNIILGADVLYDSS 140


>At1g63855.1 68414.m07229 expressed protein
          Length = 159

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = -2

Query: 359 LDWNEITDLP--NKRPDVILGADIVYDPS 279
           L W  + D P  + RP++ILGAD++YD S
Sbjct: 113 LTWG-VWDAPILDLRPNIILGADVLYDSS 140


>At3g46290.1 68416.m05010 protein kinase, putative similar to
           receptor-like protein kinase [Catharanthus roseus]
           gi|1644291|emb|CAA97692
          Length = 830

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +1

Query: 226 VIFSVTEYFHTLQSGFSIEGSYTISAPSITSGLLFGRSVIS--FQSNILTSVSESPVKIG 399
           ++ S       +  GF+   +Y I+  S T+G L GR  +S    S +LTS  E    +G
Sbjct: 10  ILISTISILLCICHGFTPVDNYLINCGSPTNGTLMGRIFLSDKLSSKLLTSSKEILASVG 69


>At1g08125.1 68414.m00891 Expressed protein
          Length = 315

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 368 VKMLDWNEITDLPNKRP--DVILGADIVYDPSILKPL 264
           V  LDW     +    P  D ++G D+VY   +L+PL
Sbjct: 126 VAELDWGNEDHITAVEPPFDYVIGTDVVYSEQLLEPL 162


>At3g42730.1 68416.m04462 Ulp1 protease family protein contains Pfam
            profile PF02902: Ulp1 protease family, C-terminal
            catalytic domain; similar to At3g24380, At5g36840,
            At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
            At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
            At1g27780, At5g36850, At1g52020, At3g24390, At4g05280,
            At1g25886, At4g03300
          Length = 1314

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = -2

Query: 428  VELLISGTAGPILTGLSLTDVKMLDWNEITDL--PNKRPDVILGADIVYDPSILK 270
            +ELL  G     LT +  TD+         D+   +KR D   G DIVY P +LK
Sbjct: 1152 LELLAFGHPFSELTTIRETDMVFYRQKYSVDIYEHSKREDGTRGRDIVYRPDVLK 1206


>At4g24880.1 68417.m03560 expressed protein
          Length = 417

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 232 FSVTEYFHTLQSGFSIEGSYTISAPSITSGLLF 330
           FSV  +++  QSG  +  +YT S P +  GLLF
Sbjct: 230 FSVVPFYNCDQSG--LHSAYTGSLPYVRDGLLF 260


>At2g24200.1 68415.m02891 cytosol aminopeptidase identical to
           cytosol aminopeptidase SP:P30184 from [Arabidopsis
           thaliana]; contains Pfam profiles: PF00883 cytosol
           aminopeptidase family catalytic domain, PF02789: cytosol
           aminopeptidase family N-terminal domain
          Length = 520

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +1

Query: 301 APSITSGLLFGRSVISFQSNILTS--VSESPVKIGPAVPEISNSTNIAN 441
           A  ++ G++FGR +I+  +N+LT   ++E   K+     ++  + NI N
Sbjct: 195 AEDVSYGVIFGRELINSPANVLTPAVLAEEAAKVASTYSDVF-TANILN 242


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,717,399
Number of Sequences: 28952
Number of extensions: 186016
Number of successful extensions: 454
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 977150592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)