Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1090
         (469 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    48   8e-05
UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1; Gr...    34   1.8  
UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12...    32   5.4  
UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole...    32   7.2  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 48.4 bits (110), Expect = 8e-05
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = +3

Query: 183 IYGTGGLLTPLVAPVLGFSSAGIA 254
           IYGTGGLLTP+VAP+LGF SAGIA
Sbjct: 17  IYGTGGLLTPIVAPMLGFGSAGIA 40



 Score = 36.7 bits (81), Expect = 0.25
 Identities = 15/20 (75%), Positives = 20/20 (100%)
 Frame = +2

Query: 296 LVAGSIVSQLTAAAMVAPTP 355
           +VAGS++SQLT+AAM+APTP
Sbjct: 55  VVAGSVISQLTSAAMLAPTP 74


>UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1;
           Granulibacter bethesdensis CGDNIH1|Rep: Hypothetical
           cytosolic protein - Granulobacter bethesdensis (strain
           ATCC BAA-1260 / CGDNIH1)
          Length = 90

 Score = 33.9 bits (74), Expect = 1.8
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 119 QKLKEHGA--SSCISGKRGRRCCNIWHWGSVDSISGSRAR 232
           Q L+EHG    S ++G+R  RC N WH G  D +   R R
Sbjct: 42  QALREHGTFQGSMLAGRRILRC-NPWHQGGYDPVPAGRCR 80


>UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12;
           Bacilli|Rep: Pyrrolidone-carboxylate peptidase -
           Bacillus subtilis
          Length = 215

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 98  LRIARREQKLKEHGASSCISGKRGRRCCNIWHWGSVDSIS 217
           L + R   K+KEHG  + +S   G   CN   +G +D IS
Sbjct: 117 LPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYGLMDHIS 156


>UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF3766,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 328

 Score = 31.9 bits (69), Expect = 7.2
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -2

Query: 228 AREPLMESTDPQCHILQHRRPRLPLMQLE 142
           A +PL   T+P+  +LQ+RRP+L L  L+
Sbjct: 5   AEQPLSLRTEPKLRVLQYRRPKLELQLLK 33


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,740,140
Number of Sequences: 1657284
Number of extensions: 6768640
Number of successful extensions: 16390
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16388
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)