Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1087
         (349 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.39 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   2.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   3.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   3.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.8  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 0.39
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 98  PHGSTFRLGADSGRFSQCCSRPPCEQR 178
           P+G T   G D G +   CS  PCE +
Sbjct: 88  PYGYT---GKDCGEYVDWCSTNPCENQ 111


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 82  LSVLVASWINISAWG*LRKIFSVL 153
           LSV+ +S+++I+ W  L K F  +
Sbjct: 488 LSVIKSSFLDINTWKMLVKSFDAI 511


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = -2

Query: 312 AVLTEISSGAK-CWTSRFTWTYPYHF*CWSQ 223
           A  TE   G    W S  ++  PY   CW+Q
Sbjct: 366 AATTEREGGYHDIWMSGESFKSPYKASCWAQ 396


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = -2

Query: 312 AVLTEISSGAK-CWTSRFTWTYPYHF*CWSQ 223
           A  TE   G    W S  ++  PY   CW+Q
Sbjct: 366 AATTEREGGYHDIWMSGESFKSPYKASCWAQ 396


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 211  RLETLAPASKVIRISPSKPGRPAFRP 288
            + E   P  K    S  KP +P++RP
Sbjct: 1151 KCEEKKPGHKPSTSSWQKPTKPSYRP 1176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,107
Number of Sequences: 336
Number of extensions: 1706
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)