Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1087
(349 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 39 9e-04
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 38 0.001
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 38 0.001
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 38 0.003
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 38 0.003
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 38 0.003
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 32 0.098
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 30 0.40
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 30 0.52
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 29 0.91
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 29 0.91
AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ... 29 0.91
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 29 1.2
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 29 1.2
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 29 1.2
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 28 1.6
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 28 1.6
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 28 1.6
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 28 1.6
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 28 1.6
U58746-5|AAB00625.1| 310|Caenorhabditis elegans Hypothetical pr... 27 3.7
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 27 3.7
Z93785-5|CAB07861.3| 321|Caenorhabditis elegans Hypothetical pr... 27 4.9
U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical pr... 27 4.9
U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical pr... 27 4.9
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 27 4.9
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 27 4.9
U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linke... 27 4.9
U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linke... 27 4.9
AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-lin... 27 4.9
AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-lin... 27 4.9
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 39.1 bits (87), Expect = 9e-04
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHEE 349
V++D F PEEI VKT D +++EG+HE+
Sbjct: 116 VDMDCYQFRPEEIQVKTLDDTLMIEGRHED 145
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHEE 349
V++DV F PEE+ V D +++EGKH E
Sbjct: 59 VSVDVSQFEPEELKVNIVDNQLIIEGKHNE 88
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHEE 349
V++DV F PEE+ V D +++EGKH E
Sbjct: 58 VSVDVSQFEPEELKVNIVDNQLIIEGKHNE 87
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 37.5 bits (83), Expect = 0.003
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2
Query: 254 VQVNLDVQHFAPEEISVKTADGYIVVEGKHEE 349
+++ DV ++ PEE++VKT D ++V KHEE
Sbjct: 28 LRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE 59
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 37.5 bits (83), Expect = 0.003
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2
Query: 254 VQVNLDVQHFAPEEISVKTADGYIVVEGKHEE 349
+++ DV ++ PEE++VKT D ++V KHEE
Sbjct: 125 LRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE 156
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 37.5 bits (83), Expect = 0.003
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2
Query: 254 VQVNLDVQHFAPEEISVKTADGYIVVEGKHEE 349
+++ DV ++ PEE++VKT D ++V KHEE
Sbjct: 139 LRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE 170
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 32.3 bits (70), Expect = 0.098
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 257 QVNLDVQHFAPEEISVKTADGYIVVEGKHE 346
+V LDVQ F P+EI VK + +++ +HE
Sbjct: 35 EVGLDVQFFTPKEIEVKVSGQELLIHCRHE 64
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHE 346
V LDV F PEE+ V + +EG HE
Sbjct: 55 VKLDVAAFKPEELKVNLEGHVLTIEGHHE 83
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 29.9 bits (64), Expect = 0.52
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHE 346
VNL+V +F PEE+ V + ++G+H+
Sbjct: 54 VNLNVSNFKPEELKVNLEGRQLSIQGEHD 82
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 29.1 bits (62), Expect = 0.91
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHEE 349
+ +DV HF PEEI V D + + G+ E
Sbjct: 106 IEIDVFHFMPEEIKVVLTDDTLSISGERFE 135
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 29.1 bits (62), Expect = 0.91
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHEE 349
+ +DV HF PEEI V D + + G+ E
Sbjct: 106 IEIDVFHFMPEEIKVVLTDDTLSISGERFE 135
>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
protein Y73F8A.5 protein.
Length = 1019
Score = 29.1 bits (62), Expect = 0.91
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 146 QCCSRPPCEQRILPPVASPCCRGS 217
+C RPPC PV PC GS
Sbjct: 315 KCIDRPPCRVSDYYPVREPCTNGS 338
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHE 346
V LDV HF PE + +K + +EG E
Sbjct: 10 VQLDVSHFKPENLKIKLDGRELKIEGIQE 38
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHE 346
V LDV HF PE + +K + +EG E
Sbjct: 57 VQLDVSHFKPENLKIKLDGRELKIEGIQE 85
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHE 346
V LDV HF PE + +K + +EG E
Sbjct: 56 VQLDVSHFKPENLKIKLDGRELKIEGIQE 84
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHEE 349
V LDV HF PE++ ++ + +EG E+
Sbjct: 48 VQLDVSHFKPEDLKIELDGRELKIEGIQEK 77
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHEE 349
V LDV HF PE++ ++ + +EG E+
Sbjct: 56 VQLDVSHFKPEDLKIELDGRELKIEGIQEK 85
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHEE 349
V LDV HF PE++ ++ + +EG E+
Sbjct: 56 VQLDVSHFKPEDLKIELDGRELKIEGIQEK 85
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHEE 349
V LDV HF PE++ ++ + +EG E+
Sbjct: 57 VQLDVSHFKPEDLKIELDGRELKIEGIQEK 86
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 260 VNLDVQHFAPEEISVKTADGYIVVEGKHEE 349
V LDV HF PE++ ++ + +EG E+
Sbjct: 56 VQLDVSHFKPEDLKIELDGRELKIEGIQEK 85
>U58746-5|AAB00625.1| 310|Caenorhabditis elegans Hypothetical
protein R05G6.4 protein.
Length = 310
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +2
Query: 77 RN*ASSSPHGSTF-RLGADSGRFSQCCS--RPPCEQRILPP 190
R A +S +G+ RLGADS + CCS PC ++ P
Sbjct: 20 RRDAKASGYGTLHARLGADSIKEFHCCSLTLQPCRNPVISP 60
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 266 LDVQHFAPEEISVKTADGYIVVEGKHEE 349
LDV + + + V D I+VEG H E
Sbjct: 85 LDVSKYDADSLKVTVVDNNIIVEGSHGE 112
>Z93785-5|CAB07861.3| 321|Caenorhabditis elegans Hypothetical
protein W09D10.5 protein.
Length = 321
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 205 LPRLETLAPASKVIRISPSKPGR 273
LP + +AP SK+ R SP+K G+
Sbjct: 256 LPPKQIIAPDSKLFRSSPTKAGK 278
>U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical
protein ZK1127.9e protein.
Length = 604
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 84 ERPRRLMDQHFGLGLTPEDFLSAA 155
E+P+ L+DQ G G +PE SAA
Sbjct: 37 EKPKALIDQENGGGASPEPVQSAA 60
>U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical
protein ZK1127.9c protein.
Length = 693
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 84 ERPRRLMDQHFGLGLTPEDFLSAA 155
E+P+ L+DQ G G +PE SAA
Sbjct: 37 EKPKALIDQENGGGASPEPVQSAA 60
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 84 ERPRRLMDQHFGLGLTPEDFLSAA 155
E+P+ L+DQ G G +PE SAA
Sbjct: 258 EKPKALIDQENGGGASPEPVQSAA 281
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 84 ERPRRLMDQHFGLGLTPEDFLSAA 155
E+P+ L+DQ G G +PE SAA
Sbjct: 249 EKPKALIDQENGGGASPEPVQSAA 272
>U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform b protein.
Length = 713
Score = 26.6 bits (56), Expect = 4.9
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -3
Query: 290 PGRNA-GRPGLLGLILITFDAGAKVSSRGSKVTPRAVVFSAHKGAGCSTEKIFRSQPQAE 114
PGR+ P L K+S+ + +T V+ S A + R Q +AE
Sbjct: 571 PGRDRLAPPNKTDTFLSASGVSRKISTISTVITREKVISSIF--APIAVFNRGRKQTKAE 628
Query: 113 MLIHEATRTLNFVI 72
H+A RT+ F++
Sbjct: 629 KRAHKAFRTITFIV 642
>U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform a protein.
Length = 682
Score = 26.6 bits (56), Expect = 4.9
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -3
Query: 290 PGRNA-GRPGLLGLILITFDAGAKVSSRGSKVTPRAVVFSAHKGAGCSTEKIFRSQPQAE 114
PGR+ P L K+S+ + +T V+ S A + R Q +AE
Sbjct: 540 PGRDRLAPPNKTDTFLSASGVSRKISTISTVITREKVISSIF--APIAVFNRGRKQTKAE 597
Query: 113 MLIHEATRTLNFVI 72
H+A RT+ F++
Sbjct: 598 KRAHKAFRTITFIV 611
>AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1a protein.
Length = 713
Score = 26.6 bits (56), Expect = 4.9
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -3
Query: 290 PGRNA-GRPGLLGLILITFDAGAKVSSRGSKVTPRAVVFSAHKGAGCSTEKIFRSQPQAE 114
PGR+ P L K+S+ + +T V+ S A + R Q +AE
Sbjct: 571 PGRDRLAPPNKTDTFLSASGVSRKISTISTVITREKVISSIF--APIAVFNRGRKQTKAE 628
Query: 113 MLIHEATRTLNFVI 72
H+A RT+ F++
Sbjct: 629 KRAHKAFRTITFIV 642
>AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1b protein.
Length = 682
Score = 26.6 bits (56), Expect = 4.9
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -3
Query: 290 PGRNA-GRPGLLGLILITFDAGAKVSSRGSKVTPRAVVFSAHKGAGCSTEKIFRSQPQAE 114
PGR+ P L K+S+ + +T V+ S A + R Q +AE
Sbjct: 540 PGRDRLAPPNKTDTFLSASGVSRKISTISTVITREKVISSIF--APIAVFNRGRKQTKAE 597
Query: 113 MLIHEATRTLNFVI 72
H+A RT+ F++
Sbjct: 598 KRAHKAFRTITFIV 611
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,807,530
Number of Sequences: 27780
Number of extensions: 152764
Number of successful extensions: 482
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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