Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1079
(439 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC024009-1|AAH24009.3| 725|Homo sapiens leucine rich repeat con... 32 0.75
AK058059-1|BAB71645.1| 524|Homo sapiens protein ( Homo sapiens ... 32 0.75
U12597-1|AAA87706.1| 501|Homo sapiens tumor necrosis factor typ... 30 4.0
X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane h... 29 7.0
X02761-1|CAA26536.1| 2328|Homo sapiens fibronectin precursor pro... 29 7.0
M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteogly... 29 7.0
BX649182-1|CAE46200.1| 1103|Homo sapiens hypothetical protein pr... 29 7.0
BX640999-1|CAE46002.1| 2193|Homo sapiens hypothetical protein pr... 29 7.0
BX640802-1|CAE45885.1| 1103|Homo sapiens hypothetical protein pr... 29 7.0
BX640731-1|CAE45847.1| 2444|Homo sapiens hypothetical protein pr... 29 7.0
BX538018-1|CAD97965.1| 2444|Homo sapiens hypothetical protein pr... 29 7.0
BX538017-1|CAD97964.1| 2444|Homo sapiens hypothetical protein pr... 29 7.0
BX537590-1|CAD97791.1| 2446|Homo sapiens hypothetical protein pr... 29 7.0
BC117176-1|AAI17177.1| 2176|Homo sapiens fibronectin 1 protein. 29 7.0
AL832202-1|CAD91166.1| 2265|Homo sapiens hypothetical protein pr... 29 7.0
AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteog... 29 7.0
AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteog... 29 7.0
AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteog... 29 7.0
AC012462-1|AAX76513.1| 2217|Homo sapiens unknown protein. 29 7.0
AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-speci... 29 7.0
AB209840-1|BAD93077.1| 2351|Homo sapiens Fibronectin 1 variant p... 29 7.0
AB191261-1|BAD52437.1| 2265|Homo sapiens fibronectin 1 protein. 29 7.0
CR589951-1|CAM12871.1| 712|Homo sapiens phosphatase and actin r... 29 9.3
CR391992-3|CAM12872.1| 712|Homo sapiens phosphatase and actin r... 29 9.3
CR391992-2|CAI20111.2| 702|Homo sapiens phosphatase and actin r... 29 9.3
BC068508-1|AAH68508.1| 630|Homo sapiens PHACTR4 protein protein. 29 9.3
BC029266-1|AAH29266.1| 702|Homo sapiens phosphatase and actin r... 29 9.3
BC021247-1|AAH21247.2| 686|Homo sapiens PHACTR4 protein protein. 29 9.3
AL840643-2|CAM12873.1| 712|Homo sapiens phosphatase and actin r... 29 9.3
AL840643-1|CAH73869.2| 702|Homo sapiens phosphatase and actin r... 29 9.3
AL670471-1|CAM12870.1| 702|Homo sapiens phosphatase and actin r... 29 9.3
AK025436-1|BAB15130.1| 654|Homo sapiens protein ( Homo sapiens ... 29 9.3
>BC024009-1|AAH24009.3| 725|Homo sapiens leucine rich repeat
containing 50 protein.
Length = 725
Score = 32.3 bits (70), Expect = 0.75
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +2
Query: 287 VPAKNPHAPPPVSVKTTGPVWDIXQVLKAARLLCKPPQQVDFED 418
+PA+ P PPPV VK + L A LL PP +V ED
Sbjct: 442 LPAEAPPPPPPVEVKGEDGDQEPEGTLPAETLLLSPPVKVKGED 485
>AK058059-1|BAB71645.1| 524|Homo sapiens protein ( Homo sapiens
cDNA FLJ25330 fis, clone TST00576. ).
Length = 524
Score = 32.3 bits (70), Expect = 0.75
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +2
Query: 287 VPAKNPHAPPPVSVKTTGPVWDIXQVLKAARLLCKPPQQVDFED 418
+PA+ P PPPV VK + L A LL PP +V ED
Sbjct: 241 LPAEAPPPPPPVEVKGEDGDQEPEGTLPAETLLLSPPVKVKGED 284
>U12597-1|AAA87706.1| 501|Homo sapiens tumor necrosis factor type 2
receptor associated protein 3 protein.
Length = 501
Score = 29.9 bits (64), Expect = 4.0
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +3
Query: 126 RMHRSHASKNQINNMRPMILEDRTAFTSLTNDDSEQQQKPVEEHRRSGHRGASWCLRRIL 305
R HR K + + + LE L D EQ+ +P + + GHR S+CL IL
Sbjct: 305 RQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVRPFQA--QCGHRYCSFCLASIL 362
>X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane
heparan sulfate proteoglycan core protein protein.
Length = 4393
Score = 29.1 bits (62), Expect = 7.0
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 305 HAPPPVSVKTTGPVWDIXQVLKAARLLC 388
H PP VSV GPVW +V KA L C
Sbjct: 3111 HGPPTVSVLPEGPVW--VKVGKAVTLEC 3136
>X02761-1|CAA26536.1| 2328|Homo sapiens fibronectin precursor
protein.
Length = 2328
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 320 PVVVHEDSSQAPRSSTVPTP 261
PVV+ ++++ PRS TVP+P
Sbjct: 864 PVVIQQETTGTPRSDTVPSP 883
>M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 4391
Score = 29.1 bits (62), Expect = 7.0
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 305 HAPPPVSVKTTGPVWDIXQVLKAARLLC 388
H PP VSV GPVW +V KA L C
Sbjct: 3109 HGPPTVSVLPEGPVW--VKVGKAVTLEC 3134
>BX649182-1|CAE46200.1| 1103|Homo sapiens hypothetical protein
protein.
Length = 1103
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 320 PVVVHEDSSQAPRSSTVPTP 261
PVV+ ++++ PRS TVP+P
Sbjct: 980 PVVIQQETTGTPRSDTVPSP 999
>BX640999-1|CAE46002.1| 2193|Homo sapiens hypothetical protein
protein.
Length = 2193
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 320 PVVVHEDSSQAPRSSTVPTP 261
PVV+ ++++ PRS TVP+P
Sbjct: 638 PVVIQQETTGTPRSDTVPSP 657
>BX640802-1|CAE45885.1| 1103|Homo sapiens hypothetical protein
protein.
Length = 1103
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 320 PVVVHEDSSQAPRSSTVPTP 261
PVV+ ++++ PRS TVP+P
Sbjct: 980 PVVIQQETTGTPRSDTVPSP 999
>BX640731-1|CAE45847.1| 2444|Homo sapiens hypothetical protein
protein.
Length = 2444
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 320 PVVVHEDSSQAPRSSTVPTP 261
PVV+ ++++ PRS TVP+P
Sbjct: 980 PVVIQQETTGTPRSDTVPSP 999
>BX538018-1|CAD97965.1| 2444|Homo sapiens hypothetical protein
protein.
Length = 2444
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 320 PVVVHEDSSQAPRSSTVPTP 261
PVV+ ++++ PRS TVP+P
Sbjct: 980 PVVIQQETTGTPRSDTVPSP 999
>BX538017-1|CAD97964.1| 2444|Homo sapiens hypothetical protein
protein.
Length = 2444
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 320 PVVVHEDSSQAPRSSTVPTP 261
PVV+ ++++ PRS TVP+P
Sbjct: 980 PVVIQQETTGTPRSDTVPSP 999
>BX537590-1|CAD97791.1| 2446|Homo sapiens hypothetical protein
protein.
Length = 2446
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 320 PVVVHEDSSQAPRSSTVPTP 261
PVV+ ++++ PRS TVP+P
Sbjct: 891 PVVIQQETTGTPRSDTVPSP 910
>BC117176-1|AAI17177.1| 2176|Homo sapiens fibronectin 1 protein.
Length = 2176
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 320 PVVVHEDSSQAPRSSTVPTP 261
PVV+ ++++ PRS TVP+P
Sbjct: 891 PVVIQQETTGTPRSDTVPSP 910
>AL832202-1|CAD91166.1| 2265|Homo sapiens hypothetical protein
protein.
Length = 2265
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 320 PVVVHEDSSQAPRSSTVPTP 261
PVV+ ++++ PRS TVP+P
Sbjct: 980 PVVIQQETTGTPRSDTVPSP 999
>AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 29.1 bits (62), Expect = 7.0
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 305 HAPPPVSVKTTGPVWDIXQVLKAARLLC 388
H PP VSV GPVW +V KA L C
Sbjct: 3109 HGPPTVSVLPEGPVW--VKVGKAVTLEC 3134
>AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 29.1 bits (62), Expect = 7.0
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 305 HAPPPVSVKTTGPVWDIXQVLKAARLLC 388
H PP VSV GPVW +V KA L C
Sbjct: 3109 HGPPTVSVLPEGPVW--VKVGKAVTLEC 3134
>AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteoglycan
perlecan protein.
Length = 4370
Score = 29.1 bits (62), Expect = 7.0
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 305 HAPPPVSVKTTGPVWDIXQVLKAARLLC 388
H PP VSV GPVW +V KA L C
Sbjct: 3088 HGPPTVSVLPEGPVW--VKVGKAVTLEC 3113
>AC012462-1|AAX76513.1| 2217|Homo sapiens unknown protein.
Length = 2217
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 320 PVVVHEDSSQAPRSSTVPTP 261
PVV+ ++++ PRS TVP+P
Sbjct: 891 PVVIQQETTGTPRSDTVPSP 910
>AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-specific
heparan sulfate proteoglycan core protein precursor
protein.
Length = 2331
Score = 29.1 bits (62), Expect = 7.0
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 305 HAPPPVSVKTTGPVWDIXQVLKAARLLC 388
H PP VSV GPVW +V KA L C
Sbjct: 1049 HGPPTVSVLPEGPVW--VKVGKAVTLEC 1074
>AB209840-1|BAD93077.1| 2351|Homo sapiens Fibronectin 1 variant
protein.
Length = 2351
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 320 PVVVHEDSSQAPRSSTVPTP 261
PVV+ ++++ PRS TVP+P
Sbjct: 977 PVVIQQETTGTPRSDTVPSP 996
>AB191261-1|BAD52437.1| 2265|Homo sapiens fibronectin 1 protein.
Length = 2265
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 320 PVVVHEDSSQAPRSSTVPTP 261
PVV+ ++++ PRS TVP+P
Sbjct: 891 PVVIQQETTGTPRSDTVPSP 910
>CR589951-1|CAM12871.1| 712|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 712
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 284 VVPAKNPHAPPPVSV-KTTGPV-WDIXQVLKAARLLCKP 394
+VPAK P PPP + + PV ++ Q + + LL KP
Sbjct: 262 MVPAKQPPIPPPKPAHRNSNPVIAELSQAINSGTLLSKP 300
>CR391992-3|CAM12872.1| 712|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 712
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 284 VVPAKNPHAPPPVSV-KTTGPV-WDIXQVLKAARLLCKP 394
+VPAK P PPP + + PV ++ Q + + LL KP
Sbjct: 262 MVPAKQPPIPPPKPAHRNSNPVIAELSQAINSGTLLSKP 300
>CR391992-2|CAI20111.2| 702|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 702
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 284 VVPAKNPHAPPPVSV-KTTGPV-WDIXQVLKAARLLCKP 394
+VPAK P PPP + + PV ++ Q + + LL KP
Sbjct: 252 MVPAKQPPIPPPKPAHRNSNPVIAELSQAINSGTLLSKP 290
>BC068508-1|AAH68508.1| 630|Homo sapiens PHACTR4 protein protein.
Length = 630
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 284 VVPAKNPHAPPPVSV-KTTGPV-WDIXQVLKAARLLCKP 394
+VPAK P PPP + + PV ++ Q + + LL KP
Sbjct: 236 MVPAKQPPIPPPKPAHRNSNPVIAELSQAINSGTLLSKP 274
>BC029266-1|AAH29266.1| 702|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 702
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 284 VVPAKNPHAPPPVSV-KTTGPV-WDIXQVLKAARLLCKP 394
+VPAK P PPP + + PV ++ Q + + LL KP
Sbjct: 252 MVPAKQPPIPPPKPAHRNSNPVIAELSQAINSGTLLSKP 290
>BC021247-1|AAH21247.2| 686|Homo sapiens PHACTR4 protein protein.
Length = 686
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 284 VVPAKNPHAPPPVSV-KTTGPV-WDIXQVLKAARLLCKP 394
+VPAK P PPP + + PV ++ Q + + LL KP
Sbjct: 236 MVPAKQPPIPPPKPAHRNSNPVIAELSQAINSGTLLSKP 274
>AL840643-2|CAM12873.1| 712|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 712
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 284 VVPAKNPHAPPPVSV-KTTGPV-WDIXQVLKAARLLCKP 394
+VPAK P PPP + + PV ++ Q + + LL KP
Sbjct: 262 MVPAKQPPIPPPKPAHRNSNPVIAELSQAINSGTLLSKP 300
>AL840643-1|CAH73869.2| 702|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 702
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 284 VVPAKNPHAPPPVSV-KTTGPV-WDIXQVLKAARLLCKP 394
+VPAK P PPP + + PV ++ Q + + LL KP
Sbjct: 252 MVPAKQPPIPPPKPAHRNSNPVIAELSQAINSGTLLSKP 290
>AL670471-1|CAM12870.1| 702|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 702
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 284 VVPAKNPHAPPPVSV-KTTGPV-WDIXQVLKAARLLCKP 394
+VPAK P PPP + + PV ++ Q + + LL KP
Sbjct: 252 MVPAKQPPIPPPKPAHRNSNPVIAELSQAINSGTLLSKP 290
>AK025436-1|BAB15130.1| 654|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21783 fis, clone HEP00284. ).
Length = 654
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 284 VVPAKNPHAPPPVSV-KTTGPV-WDIXQVLKAARLLCKP 394
+VPAK P PPP + + PV ++ Q + + LL KP
Sbjct: 204 MVPAKQPPIPPPKPAHRNSNPVIAELSQAINSGTLLSKP 242
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,584,343
Number of Sequences: 237096
Number of extensions: 1205747
Number of successful extensions: 3731
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3731
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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