Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1078
         (379 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0234 - 26602660-26602728,26602814-26602988,26603077-266031...    33   0.056
06_01_0356 + 2557127-2557193,2557272-2557315,2557433-2557528,255...    31   0.23 
06_03_0740 - 24006485-24006629,24006821-24006864,24006954-240071...    31   0.30 
01_06_0465 - 29573972-29574110,29574300-29574343,29574434-295746...    29   1.2  
06_03_0073 + 16229369-16230115,16230182-16230431,16230618-162307...    29   1.6  
01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496     27   4.9  

>05_06_0234 -
           26602660-26602728,26602814-26602988,26603077-26603120,
           26603204-26603381,26603468-26603652,26603737-26603801,
           26603985-26604066,26604342-26604434,26605096-26605191,
           26605312-26605355,26605467-26605530
          Length = 364

 Score = 33.5 bits (73), Expect = 0.056
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +1

Query: 265 DIEAKFYSEVHALECKYEKLYK 330
           D+EAKF+ E  ALE KY+K+Y+
Sbjct: 73  DLEAKFFEERAALEAKYQKMYE 94


>06_01_0356 +
           2557127-2557193,2557272-2557315,2557433-2557528,
           2559259-2559351,2559450-2559540,2559617-2559678,
           2559754-2559938,2560022-2560199,2560293-2560336,
           2560440-2560635,2560728-2560745,2560955-2561005
          Length = 374

 Score = 31.5 bits (68), Expect = 0.23
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +1

Query: 265 DIEAKFYSEVHALECKYEKLYK 330
           +IE KF+ E  ALE KY+KLY+
Sbjct: 74  EIELKFFEERAALEAKYQKLYE 95


>06_03_0740 -
           24006485-24006629,24006821-24006864,24006954-24007122,
           24007226-24007413,24007572-24007634,24007992-24008084,
           24009837-24009932,24010024-24010067,24010184-24010357,
           24010764-24010974
          Length = 408

 Score = 31.1 bits (67), Expect = 0.30
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 265 DIEAKFYSEVHALECKYEKLY 327
           ++E KF+ E  ALE KY+KLY
Sbjct: 180 ELEVKFFEEKAALEAKYQKLY 200


>01_06_0465 -
           29573972-29574110,29574300-29574343,29574434-29574602,
           29574707-29574894,29575081-29575145,29575257-29575311,
           29575502-29575594,29576035-29576130,29576259-29576302,
           29576419-29576431
          Length = 301

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 265 DIEAKFYSEVHALECKYEKLY 327
           ++EAKF  E  ALE  Y+KLY
Sbjct: 56  ELEAKFLEEKAALEANYQKLY 76


>06_03_0073 +
           16229369-16230115,16230182-16230431,16230618-16230728,
           16230768-16231153
          Length = 497

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +1

Query: 196 RWHPTPECSSANPRLENSSEEFVDIEAKFYSEVHALECKYEKLYKLFMKSEL 351
           RW P P+  S  P ++     FV++  K Y  V  L+      Y  ++K  L
Sbjct: 402 RWLPFPQ-RSRKPSVDEQFARFVEVIQKIYINVPLLDAMQVPTYARYLKDIL 452


>01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496
          Length = 428

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 164 SGHHKSPSCRSDGILP 211
           SGH   PSCRS G +P
Sbjct: 208 SGHENLPSCRSSGPIP 223


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,903,623
Number of Sequences: 37544
Number of extensions: 171924
Number of successful extensions: 365
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)