Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1078
         (379 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome ass...    30   1.1  
BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p pro...    30   1.1  
AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA...    30   1.1  
BT030286-1|ABN49425.1|  649|Drosophila melanogaster IP18554p pro...    28   4.6  

>U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome
           assembly protein NAP-1 protein.
          Length = 370

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +1

Query: 238 LENSSEEFVDIEAKFYSEVHALECKYEKLYK-LFMK 342
           L+N   + ++IEA+F+ +V+ LE KY+  Y+ LF K
Sbjct: 60  LKNLQLQHLNIEAQFFEDVYKLEQKYQVQYQPLFDK 95


>BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p
           protein.
          Length = 370

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +1

Query: 238 LENSSEEFVDIEAKFYSEVHALECKYEKLYK-LFMK 342
           L+N   + ++IEA+F+ +V+ LE KY+  Y+ LF K
Sbjct: 60  LKNLQLQHLNIEAQFFEDVYKLEQKYQVQYQPLFDK 95


>AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA
           protein.
          Length = 370

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +1

Query: 238 LENSSEEFVDIEAKFYSEVHALECKYEKLYK-LFMK 342
           L+N   + ++IEA+F+ +V+ LE KY+  Y+ LF K
Sbjct: 60  LKNLQLQHLNIEAQFFEDVYKLEQKYQVQYQPLFDK 95


>BT030286-1|ABN49425.1|  649|Drosophila melanogaster IP18554p
           protein.
          Length = 649

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = -3

Query: 266 STNSSEEFSRRGFADEHSGVGCH 198
           ST SSEE S  G  D HS  G H
Sbjct: 517 STGSSEEVSSSGGLDNHSASGSH 539


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,526,604
Number of Sequences: 53049
Number of extensions: 294791
Number of successful extensions: 675
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)