Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1075
(648 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 107 5e-24
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 107 5e-24
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 107 6e-24
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 107 6e-24
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 107 8e-24
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 107 8e-24
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 107 8e-24
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 107 8e-24
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 107 8e-24
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 99 1e-21
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 93 1e-19
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 89 3e-18
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 60 2e-09
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 57 9e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 1e-08
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 49 2e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 9e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.094
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 33 0.22
At4g01120.1 68417.m00150 G-box binding factor 2 (GBF2) identical... 31 0.66
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 29 3.5
At4g26670.1 68417.m03842 mitochondrial import inner membrane tra... 28 6.1
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 6.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 6.1
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.1
At2g05290.1 68415.m00557 expressed protein similar to zinc finge... 27 8.1
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 107 bits (258), Expect = 5e-24
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVL
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVL 106
Score = 102 bits (245), Expect = 2e-22
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 107 bits (258), Expect = 5e-24
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVL
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVL 106
Score = 102 bits (245), Expect = 2e-22
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 107 bits (257), Expect = 6e-24
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVL
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVL 106
Score = 102 bits (245), Expect = 2e-22
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 107 bits (257), Expect = 6e-24
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVL
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVL 106
Score = 102 bits (245), Expect = 2e-22
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 107 bits (256), Expect = 8e-24
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+L
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPIL 106
Score = 102 bits (245), Expect = 2e-22
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 107 bits (256), Expect = 8e-24
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVL
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVL 106
Score = 98.3 bits (234), Expect = 4e-21
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGD ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 107 bits (256), Expect = 8e-24
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVL
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVL 106
Score = 98.3 bits (234), Expect = 4e-21
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGD ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 107 bits (256), Expect = 8e-24
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+L
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPIL 106
Score = 102 bits (245), Expect = 2e-22
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 107 bits (256), Expect = 8e-24
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVL
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVL 106
Score = 98.3 bits (234), Expect = 4e-21
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGD ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 99 bits (238), Expect = 1e-21
Identities = 39/47 (82%), Positives = 46/47 (97%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
AQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+L
Sbjct: 61 AQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPIL 107
Score = 97.1 bits (231), Expect = 9e-21
Identities = 42/59 (71%), Positives = 52/59 (88%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGD +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 93.5 bits (222), Expect = 1e-19
Identities = 37/47 (78%), Positives = 45/47 (95%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVL
Sbjct: 15 AEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVL 61
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 88.6 bits (210), Expect = 3e-18
Identities = 41/62 (66%), Positives = 45/62 (72%)
Frame = +1
Query: 211 RDGRYGTEGLLCRRWAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 390
RDG E + + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 391 VL 396
VL
Sbjct: 94 VL 95
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG-DGH 259
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG +GH
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGH 50
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 59.7 bits (138), Expect = 2e-09
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1
Query: 277 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
L + YP+ +GIV NWDDME +W H FYNEL++ P + +L
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKIL 105
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 253
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 193
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 47.2 bits (107), Expect = 9e-06
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 265 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
+R + + P + GIVT+WD ++ +W H F N L + P EHP+L
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPML 122
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 193
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +1
Query: 265 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+L
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPML 128
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +1
Query: 283 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 387
L YPIEHG V +WD ME+ W +N LR PE+H
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDH 120
Score = 35.9 bits (79), Expect = 0.023
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 104 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 190
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 253
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.094
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 228 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 91
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 199
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 283 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 396
++ PI+ G + N D +IW H F + L +AP +L
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLL 98
>At4g01120.1 68417.m00150 G-box binding factor 2 (GBF2) identical to
G-box binding factor 2 (GBF2) SP:P42775 from
[Arabidopsis thaliana];contains Pfam profile: PF00170
bZIP transcription factor
Length = 360
Score = 31.1 bits (67), Expect = 0.66
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 381 GTPSPVTEAPSTPXATERSDQIMFEH*HAACTSHQAVS-RVPSVYTVCLNPGRVPHVPLR 557
G P+ ++ PS A E+S+ ++ H AA ++ +P Y L PG P +
Sbjct: 7 GNPTNNSDKPSQAAAPEQSNVHVYHHDWAAMQAYYGPRVGIPQYYNSNLAPGHAPPPYMW 66
Query: 558 GSIPSIFADYG 590
S + A YG
Sbjct: 67 ASPSPMMAPYG 77
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 292 PIEHGIVTNWDDMEKIWHHTFYNEL 366
PIE G++ +WD ME + + Y L
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGL 81
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 104 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 196
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At4g26670.1 68417.m03842 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q9Z0V8 Mitochondrial import inner
membrane translocase subunit TIM17 A {Mus musculus};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 210
Score = 27.9 bits (59), Expect = 6.1
Identities = 21/55 (38%), Positives = 24/55 (43%)
Frame = +2
Query: 104 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
ALV +C FAGD A AV SI G G+ G K S+ G AK
Sbjct: 37 ALVTIPAPAVCLFRFAGDAAGGAVMGSIFG--YGSGLFKKKGFKGSFADAGQSAK 89
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 277 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 378
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 277 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 378
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 204 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 82
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g05290.1 68415.m00557 expressed protein similar to zinc finger
protein [Arabidopsis thaliana] GI:976277
Length = 383
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2
Query: 308 IPCSMGYLRVRIPLLLCAHLLHKSPSVPYRPS 213
+ + Y R+R C L H+ P PY PS
Sbjct: 193 VKIGIDYERIRKRCFQCQRLTHEKPRCPYLPS 224
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,606,639
Number of Sequences: 28952
Number of extensions: 364068
Number of successful extensions: 947
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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