Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1071
(359 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 147 6e-35
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 140 9e-33
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 138 2e-32
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 138 3e-32
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 138 4e-32
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 137 6e-32
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 135 3e-31
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 132 2e-30
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 132 2e-30
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 131 3e-30
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 126 1e-28
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 122 2e-27
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 122 2e-27
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 121 4e-27
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 115 3e-25
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 112 2e-24
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 110 6e-24
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 109 1e-23
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 109 1e-23
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 106 1e-22
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 104 5e-22
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 103 7e-22
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 101 3e-21
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 99 1e-20
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 100 2e-20
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 99 2e-20
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 98 5e-20
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 95 3e-19
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 93 1e-18
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 92 2e-18
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 89 2e-17
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 89 2e-17
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 84 6e-16
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 83 1e-15
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 83 1e-15
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 83 2e-15
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 82 2e-15
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 82 3e-15
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 81 6e-15
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 81 8e-15
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 80 1e-14
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 80 1e-14
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 79 2e-14
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 79 2e-14
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 78 4e-14
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 78 5e-14
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 77 9e-14
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 77 1e-13
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 76 2e-13
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 76 2e-13
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 76 2e-13
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 75 4e-13
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 75 5e-13
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 75 5e-13
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 73 1e-12
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 73 2e-12
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 72 4e-12
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 71 6e-12
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 70 1e-11
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 69 2e-11
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 66 1e-10
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 66 2e-10
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 66 2e-10
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 65 3e-10
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 65 3e-10
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 65 3e-10
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 64 5e-10
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 64 9e-10
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 63 1e-09
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 63 2e-09
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 63 2e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 62 2e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 62 3e-09
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 60 1e-08
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 60 1e-08
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 59 2e-08
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 57 8e-08
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 57 8e-08
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 56 2e-07
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 55 4e-07
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 54 6e-07
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 54 6e-07
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 7e-06
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 51 7e-06
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 50 1e-05
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 43 0.001
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 42 0.002
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 42 0.003
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 40 0.010
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 38 0.040
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 38 0.040
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 37 0.092
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 36 0.16
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 34 0.65
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 0.65
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 34 0.86
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 34 0.86
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 33 1.5
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 33 1.5
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 33 2.0
UniRef50_A3XIT6 Cluster: Putative uncharacterized protein; n=1; ... 32 2.6
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 32 3.5
UniRef50_Q31J36 Cluster: Cation diffusion facilitator (CDF) fami... 32 3.5
UniRef50_P55682 Cluster: Uncharacterized transporter y4wD; n=2; ... 32 3.5
UniRef50_P02209 Cluster: Globin-3; n=5; Myxinidae|Rep: Globin-3 ... 32 3.5
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 31 4.6
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 31 4.6
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 31 6.1
UniRef50_A5FDI9 Cluster: Putative uncharacterized protein; n=1; ... 31 8.0
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 147 bits (356), Expect = 6e-35
Identities = 70/85 (82%), Positives = 76/85 (89%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FTVG+D+DTRAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLFTVGG
Sbjct: 206 FTVGMDVDTRAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGG 265
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
LTGV+LANSSIDI LHDTYYVVAHF
Sbjct: 266 LTGVVLANSSIDIVLHDTYYVVAHF 290
Score = 33.1 bits (72), Expect = 1.5
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGGLL 306
FHYVLS+GAVFAI+ G++
Sbjct: 290 FHYVLSMGAVFAIMAGIV 307
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 140 bits (338), Expect = 9e-33
Identities = 65/81 (80%), Positives = 74/81 (91%)
Frame = +2
Query: 14 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 193
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 194 ILANSSIDITLHDTYYVVAHF 256
+LANSS+DI LHDTYYVVAHF
Sbjct: 61 VLANSSLDIVLHDTYYVVAHF 81
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 138 bits (335), Expect = 2e-32
Identities = 60/85 (70%), Positives = 76/85 (89%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FLFTVGG
Sbjct: 293 FTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGG 352
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
LTG++LANSS+DI LHDTYYVVAHF
Sbjct: 353 LTGIVLANSSLDIVLHDTYYVVAHF 377
Score = 35.1 bits (77), Expect = 0.37
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGGLL 306
FHYVLS+GAVFAI+GG +
Sbjct: 377 FHYVLSMGAVFAIMGGFI 394
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 138 bits (334), Expect = 3e-32
Identities = 62/85 (72%), Positives = 75/85 (88%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLFTVGG
Sbjct: 58 FTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGG 117
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
LTG+ILANSS+DI LHDTYYVVAHF
Sbjct: 118 LTGIILANSSLDIVLHDTYYVVAHF 142
Score = 34.7 bits (76), Expect = 0.49
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGGLL 306
FHYVLS+GAVFAI+GG +
Sbjct: 142 FHYVLSMGAVFAIMGGFV 159
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 138 bits (333), Expect = 4e-32
Identities = 62/85 (72%), Positives = 74/85 (87%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGG
Sbjct: 293 FTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGG 352
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
LTG++LANSSIDI LHDTYYVVAHF
Sbjct: 353 LTGIVLANSSIDIVLHDTYYVVAHF 377
Score = 32.3 bits (70), Expect = 2.6
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGGLL 306
FHYVLS+GAVFAI+ G +
Sbjct: 377 FHYVLSMGAVFAIMAGFV 394
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 137 bits (331), Expect = 6e-32
Identities = 61/85 (71%), Positives = 74/85 (87%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGG
Sbjct: 293 FTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGG 352
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
LTG++LANSS+DI LHDTYYVVAHF
Sbjct: 353 LTGIVLANSSLDIVLHDTYYVVAHF 377
Score = 32.3 bits (70), Expect = 2.6
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGGLL 306
FHYVLS+GAVFAI+ G +
Sbjct: 377 FHYVLSMGAVFAIMAGFV 394
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 135 bits (326), Expect = 3e-31
Identities = 66/120 (55%), Positives = 84/120 (70%), Gaps = 1/120 (0%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT+G+D+DTRAYFTSAT+IIA+PTGIKIF +AT G ++ N IL +GF+FLFTVGG
Sbjct: 277 FTIGMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGG 336
Query: 182 LTGVILANSSIDITLHDTYYVVAHFIMFYQ*EQYLQLLGDY*L-ISFIYRLSLNSYILKI 358
LTGV+L+NSS+D+ LHDTYY VAHF +LG + + L +N Y LKI
Sbjct: 337 LTGVVLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGFIYWFPMFFGLMMNEYFLKI 396
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 132 bits (319), Expect = 2e-30
Identities = 58/85 (68%), Positives = 75/85 (88%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
+TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L LGFVF+FT+GG
Sbjct: 293 YTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTIGG 352
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
L+GV+LAN+S+DI HDTYYVVAHF
Sbjct: 353 LSGVVLANASLDIAFHDTYYVVAHF 377
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGG 300
FHYVLS+GAVFA+ G
Sbjct: 377 FHYVLSMGAVFALFSG 392
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 132 bits (318), Expect = 2e-30
Identities = 58/85 (68%), Positives = 73/85 (85%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ + + + LGFVFLFT+GG
Sbjct: 270 FTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVFLFTLGG 329
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
LTG++LANSSID+ LHDTYYVVAHF
Sbjct: 330 LTGIVLANSSIDVVLHDTYYVVAHF 354
Score = 31.5 bits (68), Expect = 4.6
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGG 300
FHYVLS+GAVFAI G
Sbjct: 354 FHYVLSMGAVFAIFAG 369
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 131 bits (317), Expect = 3e-30
Identities = 59/85 (69%), Positives = 72/85 (84%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FTVG+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L +GF+FLFT+GG
Sbjct: 295 FTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGG 354
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
LTG++LANS +DI LHDTYYVVAHF
Sbjct: 355 LTGIVLANSGLDIALHDTYYVVAHF 379
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGG 300
FHYVLS+GAVFA+ G
Sbjct: 379 FHYVLSMGAVFALFAG 394
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 126 bits (304), Expect = 1e-28
Identities = 57/85 (67%), Positives = 72/85 (84%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
+TVG+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+ +L +GF+FLFT+GG
Sbjct: 300 YTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTIGG 359
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
LTG++LANS +DI+LHDTYYVVAHF
Sbjct: 360 LTGIVLANSGLDISLHDTYYVVAHF 384
Score = 31.5 bits (68), Expect = 4.6
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGG 300
FHYVLS+GAVFAI G
Sbjct: 384 FHYVLSMGAVFAIFAG 399
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 122 bits (294), Expect = 2e-27
Identities = 57/83 (68%), Positives = 68/83 (81%)
Frame = +2
Query: 8 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 187
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 188 GVILANSSIDITLHDTYYVVAHF 256
G++LANSS+DI LHDTYYVVAHF
Sbjct: 356 GIVLANSSLDIALHDTYYVVAHF 378
Score = 32.3 bits (70), Expect = 2.6
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGG 300
FHYVLS+GAVFAI+ G
Sbjct: 378 FHYVLSMGAVFAILAG 393
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 122 bits (294), Expect = 2e-27
Identities = 57/87 (65%), Positives = 72/87 (82%), Gaps = 2/87 (2%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RLGFVFLFTV 175
+ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + + LGF+FLFT+
Sbjct: 258 YVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWALGFIFLFTI 317
Query: 176 GGLTGVILANSSIDITLHDTYYVVAHF 256
GGLTG++L+NSS+DI LHDTYYVVAHF
Sbjct: 318 GGLTGIVLSNSSLDILLHDTYYVVAHF 344
Score = 33.9 bits (74), Expect = 0.86
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGG 300
FHYVLS+GAVFAI GG
Sbjct: 344 FHYVLSMGAVFAIFGG 359
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 121 bits (291), Expect = 4e-27
Identities = 53/85 (62%), Positives = 71/85 (83%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
+TVG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +FT+GG
Sbjct: 319 YTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGG 378
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
L+GV+LAN+S +I HDTYYVVAHF
Sbjct: 379 LSGVVLANASENIAFHDTYYVVAHF 403
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGG 300
FHYVLS+GAVFA+ G
Sbjct: 403 FHYVLSMGAVFALFSG 418
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 115 bits (276), Expect = 3e-25
Identities = 51/85 (60%), Positives = 67/85 (78%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++ ++ LGF+FLFTVGG
Sbjct: 335 FTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTVGG 394
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TGV+LAN +D LHDTYYVVAHF
Sbjct: 395 VTGVVLANGGVDDVLHDTYYVVAHF 419
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 112 bits (270), Expect = 2e-24
Identities = 50/83 (60%), Positives = 67/83 (80%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FTVG+D D+RAYF+ A++IIA+PTG KIF LATI+G + + +L +GF+ LFT+GG
Sbjct: 310 FTVGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTIGG 369
Query: 182 LTGVILANSSIDITLHDTYYVVA 250
+TGV++ANSS+DI HDTYYVVA
Sbjct: 370 VTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 110 bits (265), Expect = 6e-24
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 14/97 (14%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
+TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT+GG
Sbjct: 352 YTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFTIGG 411
Query: 182 L--------------TGVILANSSIDITLHDTYYVVA 250
L +GV+LAN+S+DI HDTYYVVA
Sbjct: 412 LLNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 32.7 bits (71), Expect = 2.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 193 NFSQFFXXXXXXXXLLCSSSFHYVLSIGAVFAIIGG 300
N+ F +L FHYVLS+GAVFA+ G
Sbjct: 464 NYKDFLATDYMLETMLFIVHFHYVLSMGAVFAMFAG 499
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 109 bits (262), Expect = 1e-23
Identities = 52/88 (59%), Positives = 67/88 (76%), Gaps = 3/88 (3%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPNIL*RLGFVFLFT 172
F G+DIDTRAYFT+AT++IAVPTG+K+F LATI G + +P+ +G V LFT
Sbjct: 296 FVAGLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVLLFT 355
Query: 173 VGGLTGVILANSSIDITLHDTYYVVAHF 256
+GGLTGVILAN+++ LHD+YYVVAHF
Sbjct: 356 IGGLTGVILANAALSTLLHDSYYVVAHF 383
Score = 33.9 bits (74), Expect = 0.86
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGG 300
FHYVLS+GAVFAI GG
Sbjct: 383 FHYVLSMGAVFAIFGG 398
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 109 bits (262), Expect = 1e-23
Identities = 50/80 (62%), Positives = 64/80 (80%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
+ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +L LGF+ LFT+GG
Sbjct: 292 YAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGG 351
Query: 182 LTGVILANSSIDITLHDTYY 241
LTGVILAN+S+D+ LHD Y
Sbjct: 352 LTGVILANASLDVALHDLKY 371
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 106 bits (255), Expect = 1e-22
Identities = 48/85 (56%), Positives = 63/85 (74%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
+T G+DIDTR YF++AT+IIA+P+ +KIF L T G+ P F+FLFTVGG
Sbjct: 303 YTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTVGG 362
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
L+G+IL+ +S+DI LHDTYYVVAHF
Sbjct: 363 LSGIILSAASLDIILHDTYYVVAHF 387
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 104 bits (249), Expect = 5e-22
Identities = 48/86 (55%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLFTVG 178
+T GID T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P GFV LFT+G
Sbjct: 296 YTSGIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIG 354
Query: 179 GLTGVILANSSIDITLHDTYYVVAHF 256
G+TG+IL+N+ ID ++HDT+YVV HF
Sbjct: 355 GITGIILSNAGIDTSIHDTHYVVGHF 380
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGG 300
FHYVLS+GAVFAI GG
Sbjct: 380 FHYVLSMGAVFAIYGG 395
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 103 bits (248), Expect = 7e-22
Identities = 48/77 (62%), Positives = 61/77 (79%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
+ VG+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I ++ + F+FLFTVGG
Sbjct: 293 YIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTVGG 352
Query: 182 LTGVILANSSIDITLHD 232
LTGV+LAN+S+D+ HD
Sbjct: 353 LTGVVLANASLDVAFHD 369
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 101 bits (243), Expect = 3e-21
Identities = 63/116 (54%), Positives = 77/116 (66%), Gaps = 4/116 (3%)
Frame = +2
Query: 17 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 196
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGGPN--- 57
Query: 197 LANSSIDITLH--DTYYV--VAHFIMFYQ*EQYLQLLGDY*LISFIYRLSLNSYIL 352
+N S+ I + Y++ + FIMF+Q YL L D SFI L ++L
Sbjct: 58 WSNFSLFINWYCSSRYHIMLLLIFIMFFQLGLYLLLYQD----SFIDTHYLQDFLL 109
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 99 bits (238), Expect = 1e-20
Identities = 45/85 (52%), Positives = 63/85 (74%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
+TVG+ + +AYF AT++IAVPTGIKIF +AT+ I++ ++ LGF+FLFT+GG
Sbjct: 398 YTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTLGG 457
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
TG+IL+ + +D HDTYYVVAHF
Sbjct: 458 TTGIILSQAGVDRAYHDTYYVVAHF 482
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 99.5 bits (237), Expect = 2e-20
Identities = 56/120 (46%), Positives = 81/120 (67%), Gaps = 5/120 (4%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFTVG 178
+T G+DIDTR+YFT+AT+IIAVPTGIKIF L++ + ++ N ++ F+ F +G
Sbjct: 276 YTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSFAIG 335
Query: 179 GLTGVILANSSIDITLHDTYYVVAHF-IMFYQ*EQYLQLLGDY*LISFI---YRLSLNSY 346
G +G+IL+N+S+D LHDTYYVVAHF I+ Y L+G Y L S++ + L L+ Y
Sbjct: 336 GTSGIILSNASVDHYLHDTYYVVAHFHIVVALSLVYGILVGLYYLSSYLSLPFSLPLSGY 395
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 99.1 bits (236), Expect = 2e-20
Identities = 46/87 (52%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFTV 175
+T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT
Sbjct: 2 YTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFTF 60
Query: 176 GGLTGVILANSSIDITLHDTYYVVAHF 256
GG TGVIL N +ID+ LHDTYYV+AHF
Sbjct: 61 GGTTGVILGNGAIDVALHDTYYVIAHF 87
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 97.9 bits (233), Expect = 5e-20
Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFTVG 178
+T G+++DTRAYFTS TI+I++PTG K+F + T + + + L L F+ FT G
Sbjct: 298 YTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFTFG 357
Query: 179 GLTGVILANSSIDITLHDTYYVVAHF 256
G TGVIL N++ID+ LHDTYYV+AHF
Sbjct: 358 GTTGVILGNAAIDVALHDTYYVIAHF 383
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 95.1 bits (226), Expect = 3e-19
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +2
Query: 35 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 196
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+IL LGFVFLFTVGGLTGVI
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 93.1 bits (221), Expect = 1e-18
Identities = 44/85 (51%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP-NIL*RLGFVFLFTVGG 181
TVG++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ LFT+GG
Sbjct: 7 TVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILLFTLGG 66
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
TGV++ N+ +DI LHDTYY+VAHF
Sbjct: 67 TTGVVMGNAGMDIALHDTYYIVAHF 91
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 92.3 bits (219), Expect = 2e-18
Identities = 40/85 (47%), Positives = 62/85 (72%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FTVG+D+DTR YF+SAT++IA+PT IK+F + + + + + F+ +F +GG
Sbjct: 50 FTVGLDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLLGG 108
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TG++LANS +D+ +HD+YYVVAHF
Sbjct: 109 VTGLVLANSEVDLVMHDSYYVVAHF 133
Score = 32.7 bits (71), Expect = 2.0
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGGLLT 309
FHYVLS+GAVF ++ G+L+
Sbjct: 133 FHYVLSLGAVFGLLNGVLS 151
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 89.4 bits (212), Expect = 2e-17
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = +2
Query: 95 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHF 256
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHF
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHF 378
Score = 32.3 bits (70), Expect = 2.6
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 253 FHYVLSIGAVFAIIGG 300
FHYVLS+GAVFAI+ G
Sbjct: 378 FHYVLSMGAVFAILAG 393
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 89.0 bits (211), Expect = 2e-17
Identities = 55/127 (43%), Positives = 75/127 (59%), Gaps = 9/127 (7%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFTVG 178
F VG D T +F+S T+II VPTGIK+F L ++ + +P + +GF+FLFTVG
Sbjct: 383 FMVGFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLFTVG 442
Query: 179 GLTGVILANSSIDITLHDTYYVVAHFIMFYQ*EQYLQLLGDY*LI--------SFIYRLS 334
G+TGV L+ S++DI HDT++VVAHF Y+ LG Y I FI S
Sbjct: 443 GVTGVALSASALDILFHDTWFVVAHF-------HYVLSLGSYSSIVIMLVWWWPFIVGYS 495
Query: 335 LNSYILK 355
LN Y+L+
Sbjct: 496 LNKYLLQ 502
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 84.2 bits (199), Expect = 6e-16
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT G+ A F AT+ IA+PTGIKIF L TI G + Y +L + F+ F +GG
Sbjct: 301 FTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGG 360
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TGV+LA ++ D HDTY+VVAHF
Sbjct: 361 VTGVMLAAAAADYQFHDTYFVVAHF 385
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 83.4 bits (197), Expect = 1e-15
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFTVG 178
FTVG+DID+R+YF+ AT II++PT +K+F + T G N + F+ F G
Sbjct: 302 FTVGLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRGNNSSWSFFSFLICFCFG 361
Query: 179 GLTGVILANSSIDITLHDTYYVVAHF 256
G TG++L++ S+DI LHDTY+VV HF
Sbjct: 362 GFTGLLLSSGSLDIMLHDTYFVVGHF 387
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 83.0 bits (196), Expect = 1e-15
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT G R +F + T++IAVPTGIKIF T+ G +I N +L GF+ F +GG
Sbjct: 303 FTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMIGG 362
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
LTGV++A+ DI +HDTY+VV HF
Sbjct: 363 LTGVMVASVPFDIHVHDTYFVVGHF 387
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 82.6 bits (195), Expect = 2e-15
Identities = 40/85 (47%), Positives = 56/85 (65%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FTVG+ + F+ T+ IAVPTG+KIF L+T+ G QI + +L +GF+ FT+GG
Sbjct: 312 FTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFTIGG 371
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
L+G + A + D HDTY+VVAHF
Sbjct: 372 LSGFMHAAAPSDAQQHDTYFVVAHF 396
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/85 (42%), Positives = 56/85 (65%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F VG+D+D+RAYF +I+I +PT +K+F + + T + + + F+F+F +G
Sbjct: 295 FVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGA 354
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TG+ L+N IDI LHDTY+VV HF
Sbjct: 355 VTGLFLSNVGIDIMLHDTYFVVGHF 379
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 81.8 bits (193), Expect = 3e-15
Identities = 36/85 (42%), Positives = 58/85 (68%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT+G + A+F AT+II++PTG+K+F L TI+ ++ + IL LGF+ F++GG
Sbjct: 337 FTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFSIGG 396
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TGV+LA D LH++ +++AHF
Sbjct: 397 MTGVLLAVPGADYVLHNSLFLIAHF 421
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 81.0 bits (191), Expect = 6e-15
Identities = 39/88 (44%), Positives = 63/88 (71%), Gaps = 3/88 (3%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFLFT 172
FT GI + +F++A++ +A+P+GI++F +ATI ++ + P++ LGF+F+FT
Sbjct: 318 FTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLFIFT 376
Query: 173 VGGLTGVILANSSIDITLHDTYYVVAHF 256
VGG+TGV++A ID +HDTY+VVAHF
Sbjct: 377 VGGVTGVMVALVPIDFQVHDTYFVVAHF 404
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 80.6 bits (190), Expect = 8e-15
Identities = 34/85 (40%), Positives = 56/85 (65%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT+G +F AT++I++PTG+K+F L TI+ ++ + I+ LGF+ F++GG
Sbjct: 336 FTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSIGG 395
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TGV+LA D LH++ +V+AHF
Sbjct: 396 MTGVLLAVPGADFVLHNSLFVIAHF 420
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 80.2 bits (189), Expect = 1e-14
Identities = 38/90 (42%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F VG+ A+F +A+ +IAVPTG+KIF LAT+ +N ++L +GF+ +F +GG
Sbjct: 310 FAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFIIGG 369
Query: 182 LTGVILANSSIDITLHDTYYVVA--HFIMF 265
++GV LA+ I++ D+YYVVA H+++F
Sbjct: 370 ISGVTLASPPINVQQTDSYYVVAHMHYVLF 399
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 79.8 bits (188), Expect = 1e-14
Identities = 36/85 (42%), Positives = 55/85 (64%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F VG+ + +F +++IA+PTGIK+F AT+ G +I +N ++ + F+ F +GG
Sbjct: 311 FAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFVIGG 370
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
LTG++ A ID L DTY+VVAHF
Sbjct: 371 LTGIMFAAVPIDWQLTDTYFVVAHF 395
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 79.4 bits (187), Expect = 2e-14
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F G++ + F T+IIAVP+ +K F + T+ I + P ++ +G V +F GG
Sbjct: 354 FVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFISGG 413
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TG+IL N+++DI LHDTYYVVAHF
Sbjct: 414 VTGIILGNNAMDIQLHDTYYVVAHF 438
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/85 (38%), Positives = 56/85 (65%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F G++ F AT++IA+P+ +K F L T++G ++ + +L L FV +F +GG
Sbjct: 341 FVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVIGG 400
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
L+G+ +A + +DI +HDTY++VAHF
Sbjct: 401 LSGIFMAATPVDIVIHDTYFIVAHF 425
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 78.2 bits (184), Expect = 4e-14
Identities = 34/85 (40%), Positives = 58/85 (68%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT+G +F++AT+++ +PTG+K+F T+ ++ + P +L LG +FL VGG
Sbjct: 355 FTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLLLVGG 414
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
LTG++LA +I+ T+H++ +VVAHF
Sbjct: 415 LTGMMLAIPAINYTVHNSVFVVAHF 439
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 77.8 bits (183), Expect = 5e-14
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT GID R+ F + ++ I++P+ +K+F + T+ ++ +L +GFV F +GG
Sbjct: 346 FTTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLFCIGFVQNFIIGG 405
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TGV LA ID+ LHDTYYVV HF
Sbjct: 406 VTGVFLAVIPIDLILHDTYYVVGHF 430
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 77.0 bits (181), Expect = 9e-14
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FTVG + F T +IAVPTG+K+F + T+ G ++ + LGF+F F +GG
Sbjct: 302 FTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGG 361
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TGV+L+ + +D HD+Y+VVAHF
Sbjct: 362 ITGVMLSMTPLDYQFHDSYFVVAHF 386
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 76.6 bits (180), Expect = 1e-13
Identities = 35/85 (41%), Positives = 58/85 (68%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT G+ +FT+++ +IA+P+G++IF +AT+ G++ +L LGF +F +GG
Sbjct: 314 FTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFIIGG 373
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
L+GV++A+ D+ HDTY+VVAHF
Sbjct: 374 LSGVMVASVPFDMQAHDTYFVVAHF 398
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 76.2 bits (179), Expect = 2e-13
Identities = 36/85 (42%), Positives = 56/85 (65%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F G+ ++FT++++ IAVP G++IF LATI + + L +GF+ +F +GG
Sbjct: 308 FVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIGG 367
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
LTGV++A+ D +HDTY+VVAHF
Sbjct: 368 LTGVMVASVPFDTQVHDTYFVVAHF 392
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 76.2 bits (179), Expect = 2e-13
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F G+ TR F+ T++IAVPTGIKIF + T++ I++ +L LG VF+F +GG
Sbjct: 248 FVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMFLIGG 307
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
LTG+ L +ID+ + D+ +VV HF
Sbjct: 308 LTGLPLGMVAIDLGVSDSLFVVGHF 332
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 75.8 bits (178), Expect = 2e-13
Identities = 33/85 (38%), Positives = 57/85 (67%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT+G ++F+ T+ I++PTG+KIF L T++ +I++ +L L F+ F +GG
Sbjct: 332 FTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFVIGG 391
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TGV+LA ++ D H+TY++V+HF
Sbjct: 392 VTGVMLAMAAADYQYHNTYFLVSHF 416
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 74.9 bits (176), Expect = 4e-13
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F G+D RA F + ++ IAVP+ +K F + T+ I +L +GFV F +GG
Sbjct: 377 FATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFILGG 436
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TGV LA+ +D+ LH TYYVV HF
Sbjct: 437 VTGVFLASIPVDLVLHATYYVVGHF 461
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 74.5 bits (175), Expect = 5e-13
Identities = 33/85 (38%), Positives = 57/85 (67%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT+G A F A+++I +PTG+KI+ + T+ +I ++ ++ L F+FLF +GG
Sbjct: 356 FTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVIGG 415
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TG++LAN +D +H+T ++VAHF
Sbjct: 416 ITGIMLANPILDYQVHNTVFLVAHF 440
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 74.5 bits (175), Expect = 5e-13
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT D R AT+ +A+P+G+K+F +AT++G +I +L L F+ F VGG
Sbjct: 302 FTAVQDFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGG 361
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TGV ++D+ LHDTY+V+ HF
Sbjct: 362 VTGVFFPVITLDLHLHDTYFVLGHF 386
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 73.3 bits (172), Expect = 1e-12
Identities = 34/85 (40%), Positives = 54/85 (63%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT G++ F +T++IA+P+ IK F ATI G ++ +N L + F+ +F VGG
Sbjct: 344 FTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFIVGG 403
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
L+G+ +A +D+ HDTY++VAHF
Sbjct: 404 LSGIFMAAVPVDVYFHDTYFIVAHF 428
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 72.9 bits (171), Expect = 2e-12
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +2
Query: 35 YFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANSS 211
YFT+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV+L N+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAG 368
Query: 212 IDITLHDTYYVVAHF 256
ID+ LHDT YVV HF
Sbjct: 369 IDLALHDTVYVVGHF 383
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 71.7 bits (168), Expect = 4e-12
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = +2
Query: 50 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 229
T++I++P G+ + + T++G I++ +L LGF+FLF +GGLTGV LA S+ + L
Sbjct: 309 TVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFLIGGLTGVPLALVSLTVHLS 368
Query: 230 DTYYVVAHF 256
+TYYVV HF
Sbjct: 369 ETYYVVGHF 377
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 70.9 bits (166), Expect = 6e-12
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = +2
Query: 35 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 214
+F + T+IIA+PT IK++ + T+ I+ +L LGF+ F GGLTG+ L N +
Sbjct: 343 FFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIITFVNGGLTGLFLGNVVV 402
Query: 215 DITLHDTYYVVAHFIM 262
D+ L DT +VVAHF M
Sbjct: 403 DVPLSDTMFVVAHFHM 418
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 69.7 bits (163), Expect = 1e-11
Identities = 36/85 (42%), Positives = 50/85 (58%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F VGI + F +T+I+AVPTG+KIF + T+ G +I +GF+F F +GG
Sbjct: 310 FAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFLIGG 369
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TGV L D + +YYVVAHF
Sbjct: 370 ITGVSLGMIPFDYQVTMSYYVVAHF 394
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 68.9 bits (161), Expect = 2e-11
Identities = 32/84 (38%), Positives = 56/84 (66%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F G+ I + + F++A+ ++AVPTG++IF +AT+ + + LGF+F+F +GG
Sbjct: 334 FATGLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVLGG 393
Query: 182 LTGVILANSSIDITLHDTYYVVAH 253
+TGV++A ++ HD+Y+VVAH
Sbjct: 394 MTGVMVAAVPFNLQAHDSYFVVAH 417
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 66.5 bits (155), Expect = 1e-10
Identities = 29/85 (34%), Positives = 54/85 (63%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT+G + +F+ +T+IIA+PTG+KIF + TI + + + F+ +F++GG
Sbjct: 331 FTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFSIGG 390
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+GVIL+ ++D H++ +++AHF
Sbjct: 391 FSGVILSIPNLDFIFHNSMFLIAHF 415
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F G++ + F+ T+II +P + L +++G+++ N L LGF+ +F GG
Sbjct: 340 FVSGMNPLSSLVFSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLFALGFISMFVSGG 399
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
++G LA SIDI LH TY+VV HF
Sbjct: 400 VSGFFLAQPSIDIYLHATYFVVGHF 424
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 65.7 bits (153), Expect = 2e-10
Identities = 28/74 (37%), Positives = 48/74 (64%)
Frame = +2
Query: 35 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 214
+F+ T +I+VPTG+K F + T+ I + ++ +GF+ F GGLTG++LA+ +
Sbjct: 326 FFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFLFGGLTGIMLASPPL 385
Query: 215 DITLHDTYYVVAHF 256
D L D+Y+++AHF
Sbjct: 386 DFHLADSYFLIAHF 399
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 65.3 bits (152), Expect = 3e-10
Identities = 32/76 (42%), Positives = 47/76 (61%)
Frame = +2
Query: 29 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 208
R F T++IA+PTG+K+F L T+ + N +L +G + F G+TGV+LA
Sbjct: 327 RHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVMLATV 386
Query: 209 SIDITLHDTYYVVAHF 256
IDI + +TY+VVAHF
Sbjct: 387 PIDIHVGNTYFVVAHF 402
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 65.3 bits (152), Expect = 3e-10
Identities = 31/84 (36%), Positives = 54/84 (64%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT G+ + +F++A+ + +PTGI++F +AT+ ++ +L G + +FT GG
Sbjct: 334 FTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFTAGG 393
Query: 182 LTGVILANSSIDITLHDTYYVVAH 253
LTGV++A + D +HDTY++VAH
Sbjct: 394 LTGVMVAIAPFDWQVHDTYFIVAH 417
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 65.3 bits (152), Expect = 3e-10
Identities = 29/85 (34%), Positives = 54/85 (63%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
+ VG+D +R +++ TI+I++P IK+ ++ + + L + F+ LF V G
Sbjct: 453 YLVGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFLVAG 512
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
TG+ L++ S+++++HDT+YVVAHF
Sbjct: 513 FTGMWLSHVSLNVSMHDTFYVVAHF 537
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 64.5 bits (150), Expect = 5e-10
Identities = 27/72 (37%), Positives = 45/72 (62%)
Frame = +2
Query: 41 TSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDI 220
++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F +GG+TGV ID
Sbjct: 304 SATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLLGGITGVFFPLVPIDY 363
Query: 221 TLHDTYYVVAHF 256
L+ TY+VV HF
Sbjct: 364 ALNGTYFVVGHF 375
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 63.7 bits (148), Expect = 9e-10
Identities = 32/84 (38%), Positives = 51/84 (60%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT GI A+F++A+ ++AVPT +++F + T+ + +L L F F +GG
Sbjct: 308 FTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFVIGG 367
Query: 182 LTGVILANSSIDITLHDTYYVVAH 253
LTGV++A D +HDTY++VAH
Sbjct: 368 LTGVMVAIVPFDWQVHDTYFIVAH 391
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 63.3 bits (147), Expect = 1e-09
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI----L*RLGFVFLF 169
FT GI + ++F +A+ +A+P+G+++F +AT + I L LGF+F+F
Sbjct: 377 FTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFLFIF 436
Query: 170 TVGGLTGVILANSSIDITLHDTYYVVAH 253
+GGLTGV++A D HD+Y++VAH
Sbjct: 437 VLGGLTGVMVAVIPFDWQAHDSYFIVAH 464
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 62.9 bits (146), Expect = 2e-09
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +2
Query: 38 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 217
F T+I+ V T IK+F + T++ + + GF+F GG+TG+ L S+D
Sbjct: 330 FGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGIALGTVSLD 389
Query: 218 ITLHDTYYVVAHF 256
+ HDTY+VVAHF
Sbjct: 390 VAWHDTYFVVAHF 402
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 62.9 bits (146), Expect = 2e-09
Identities = 29/73 (39%), Positives = 47/73 (64%)
Frame = +2
Query: 38 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 217
F T++I++P+ + + + T+ + Y+ +L LG VF+F VGGLTG+ L + S+D
Sbjct: 342 FMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFGVGGLTGLFLGDISMD 401
Query: 218 ITLHDTYYVVAHF 256
+ LHDT +VV HF
Sbjct: 402 LYLHDTMFVVGHF 414
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 62.5 bits (145), Expect = 2e-09
Identities = 32/84 (38%), Positives = 51/84 (60%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F GI A+F +A+++I++P+ + +F +ATI + + L GFV +F VGG
Sbjct: 328 FATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFVVGG 387
Query: 182 LTGVILANSSIDITLHDTYYVVAH 253
++GV+ A +D L DTY+VVAH
Sbjct: 388 VSGVMTAAVPLDWQLTDTYFVVAH 411
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 62.1 bits (144), Expect = 3e-09
Identities = 30/85 (35%), Positives = 45/85 (52%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
FT G F ++ + + T IK+F AT++ I + GF+F GG
Sbjct: 311 FTSGQSAFNGGVFGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVFGG 370
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TG+ LA S+D+ HDTY++VAHF
Sbjct: 371 MTGIALATVSLDVHWHDTYFIVAHF 395
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 60.1 bits (139), Expect = 1e-08
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RLGFVFLFTVG 178
FT GI A F++A+ ++AVPT +++F + T+ GT P ++ L F F +G
Sbjct: 308 FTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATFVIG 366
Query: 179 GLTGVILANSSIDITLHDTYYVVAH 253
GLTGV++A D +HDT+++VAH
Sbjct: 367 GLTGVMVAVVPFDWQVHDTHFIVAH 391
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 60.1 bits (139), Expect = 1e-08
Identities = 29/85 (34%), Positives = 47/85 (55%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F GI++ + F + TI I++P + +F + T+ ++ + L LG + LF +GG
Sbjct: 314 FLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFIIGG 373
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TGV L +D TY+VVAHF
Sbjct: 374 ITGVFLGAIVLDYQFRGTYWVVAHF 398
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 59.3 bits (137), Expect = 2e-08
Identities = 29/85 (34%), Positives = 50/85 (58%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F G +I TR +++ TI+I++P + + + T++ ++ Y +L +G + F +GG
Sbjct: 300 FITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFAVGALLNFIIGG 359
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
TGV L + +ID TY+VVAHF
Sbjct: 360 STGVYLGSIAIDRGFRGTYWVVAHF 384
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 57.2 bits (132), Expect = 8e-08
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +2
Query: 38 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 217
F + T +++PTG + TI G ++ N +L L + F +GGLTG+ A+ D
Sbjct: 396 FMTITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFLIGGLTGIFNADVPAD 455
Query: 218 ITLHDTYYVVAHF 256
+ LH+TY+V+AHF
Sbjct: 456 LQLHNTYWVIAHF 468
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 57.2 bits (132), Expect = 8e-08
Identities = 35/73 (47%), Positives = 38/73 (52%)
Frame = +2
Query: 35 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 214
Y SA P G+K F + + G P I F GGLTGVILANSS
Sbjct: 223 YLXSAXXFXXGPPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSX 281
Query: 215 DITLHDTYYVVAH 253
DI LHDTYYVVAH
Sbjct: 282 DIILHDTYYVVAH 294
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1
Query: 256 HYVLSIGAVFAIIGGLL 306
HYVLS+GAVFAI+ G++
Sbjct: 296 HYVLSMGAVFAILAGIV 312
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 55.6 bits (128), Expect = 2e-07
Identities = 27/45 (60%), Positives = 31/45 (68%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 136
+ VG+D DTRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 293 YIVGLDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 54.8 bits (126), Expect = 4e-07
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGFVFLFTVG 178
F VG D+ T +F+S T+II VPTGIK+F L + ++ N I+ +GF+FLFT+G
Sbjct: 33 FMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGFIFLFTMG 92
Query: 179 GLTG 190
G G
Sbjct: 93 GRQG 96
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.4 bits (125), Expect = 6e-07
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIF 88
+ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 2 YVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 54.4 bits (125), Expect = 6e-07
Identities = 26/88 (29%), Positives = 45/88 (51%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
F G+ + F T+ + + +F +AT+ +I ++ ++ +G + LF G
Sbjct: 294 FATGMSFTEKTVFMLGTLAAVPASAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFFSAG 353
Query: 182 LTGVILANSSIDITLHDTYYVVAHFIMF 265
GV+ A +D T HDTY+VV HF +F
Sbjct: 354 AGGVLNAAMPLDFTTHDTYWVVGHFHLF 381
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 7e-06
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 20 IDTRAYFTSATIIIAVPTGIKIFR*LAT 103
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 50.8 bits (116), Expect = 7e-06
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +2
Query: 50 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 229
T I++PT + I +AT+ G + + IL L F +GG++GV ++ +ID +H
Sbjct: 337 TETISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFMIGGVSGVTQSSLAIDTIVH 396
Query: 230 DTYYVVAHFIMFYQ*EQYLQLLGD 301
YYVVAHF F + L+G+
Sbjct: 397 GDYYVVAHFHYFMVGVAVMGLMGN 420
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 142
FTVG+D++T +F+S T+II VPTGIK+F L + +++N IL
Sbjct: 56 FTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 43.2 bits (97), Expect = 0.001
Identities = 23/57 (40%), Positives = 29/57 (50%)
Frame = +1
Query: 85 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXLLCSSSF 255
F MT Y +W++N L P + FC FI+ N +FSQF LLC SSF
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYLLCCSSF 80
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 112
F VG D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 57 FMVGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 41.9 bits (94), Expect = 0.003
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +2
Query: 5 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL-----F 169
T + +D RA+ T +T+++A +G+ + TI T Y+ LG FL F
Sbjct: 58 TFPLPVDLRAWITVSTLVLASGSGLTVLNLGLTIL-TSKGYDYKD--PLGMTFLIALIGF 114
Query: 170 TVGGLTGVILANSSIDITLHDTYYVVAHF 256
+GG+ + L + I+ +H+TYYVV HF
Sbjct: 115 IIGGVQALPLPINIINGVVHNTYYVVGHF 143
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 40.3 bits (90), Expect = 0.010
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = -3
Query: 261 IMK*ATT**VSCNVISIEELAKIXXXXXXXXXXXXXXNLHKILGL*L-I*VPCIVASHLK 85
+MK + T VS N SI E +H ++G VP + +H K
Sbjct: 1 MMKMSNTNQVSWNKASITEAESTIPVTPPMVKSTXNPIIHHMIGSHSRSRVPASMYNHEK 60
Query: 84 ILIPVGTAIIIVAEVKYARVSISIPTVN 1
LIPVGT +I+V E+K V S PTVN
Sbjct: 61 TLIPVGTPMIMVTELKKTAVPKSSPTVN 88
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 38.3 bits (85), Expect = 0.040
Identities = 13/31 (41%), Positives = 24/31 (77%)
Frame = +2
Query: 164 LFTVGGLTGVILANSSIDITLHDTYYVVAHF 256
LF +GG+TG++ A+ ++++ +H+T YV HF
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHF 384
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 38.3 bits (85), Expect = 0.040
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +3
Query: 81 KFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED 182
KFL D +MELKLI+ L FYED L FY Q ED
Sbjct: 316 KFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 37.1 bits (82), Expect = 0.092
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +2
Query: 47 ATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITL 226
+T+ I++ + + +F LA + + I P + L +F + G +GV A + ++ L
Sbjct: 332 STMGISIVSAVSVFALLAMMWRSGIKMTPPYMFSLIAMFAWLEAGYSGVAQAIVAWNLYL 391
Query: 227 HDTYYVVAHF 256
H+T +VVAHF
Sbjct: 392 HNTLWVVAHF 401
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 36.3 bits (80), Expect = 0.16
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 158 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHF 256
+ LF GG+TG+I A+ ++ +H+T ++V HF
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHF 372
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 34.3 bits (75), Expect = 0.65
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +2
Query: 158 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHF 256
+ LF + G +GV+ A+ +++ +H+T +VV HF
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHF 372
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 34.3 bits (75), Expect = 0.65
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Frame = +2
Query: 14 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFLFTVGGL 184
+ I R + +T+I+A +G+ + TI T Y+ P + L + F + G
Sbjct: 291 LPIVLREWVNLSTLILATGSGLTVLNLGLTIF-TSRKYDWKDPVGMGALISLIGFILAGA 349
Query: 185 TGVILANSSIDITLHDTYYVVAHF 256
++L +SI+ H++YYVV HF
Sbjct: 350 QALVLPENSINPLFHNSYYVVGHF 373
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 33.9 bits (74), Expect = 0.86
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +2
Query: 2 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 181
+ V + I + T + +P+ + F AT G + +N + G
Sbjct: 300 YMVNLPIALKLLQEVLTYSVVIPSMMTFFNLWATAKGADVKWNIITAWTVTSFAGAIAAG 359
Query: 182 LTGVILANSSIDITLHDTYYVVAHF 256
+TG+ A S D +H+T +VV HF
Sbjct: 360 VTGISNATISFDAIVHNTDWVVGHF 384
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 33.9 bits (74), Expect = 0.86
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Frame = +2
Query: 32 AYFTSATIIIAVPTGIKIFR*LATIHGTQINY-------NPNIL*RLGFVFLFT-VGGLT 187
A F S A+P G++ R + G + NP + + LF +GG+T
Sbjct: 316 AAFASMIHAFAIPAGLEAGRRQRGLGGGLFGWLTSGPWKNPVFSATIFSIILFGFMGGIT 375
Query: 188 GVILANSSIDITLHDTYYVVAHF 256
GV++ +++T H+T+ V HF
Sbjct: 376 GVLMGQLQLNMTWHNTFATVGHF 398
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 33.1 bits (72), Expect = 1.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 149 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHF 256
L + +GG++GV + I+I +H+T YV HF
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHF 386
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 33.1 bits (72), Expect = 1.5
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +2
Query: 128 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFIM 262
+P++ +L + F GG+TG+I A+ +++ +H+T +V HF M
Sbjct: 346 DPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFHM 390
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 32.7 bits (71), Expect = 2.0
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 128 NPNIL*RLGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFIMFY 268
NP +L L F F+ GG G+I + +D T+H+T ++ HF + +
Sbjct: 325 NPQML-ALAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFHLIF 371
>UniRef50_A3XIT6 Cluster: Putative uncharacterized protein; n=1;
Leeuwenhoekiella blandensis MED217|Rep: Putative
uncharacterized protein - Leeuwenhoekiella blandensis
MED217
Length = 156
Score = 32.3 bits (70), Expect = 2.6
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +2
Query: 200 ANSSIDITLHDTYYVVAHFIMF 265
A+S++DI +HDTY+V++ I F
Sbjct: 31 ADSTLDINIHDTYFVISDIIFF 52
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 31.9 bits (69), Expect = 3.5
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = +2
Query: 128 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFIMFY 268
NP +L + + + +GG G++ A+ +++ +H+T +V HF + +
Sbjct: 327 NPMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIF 373
>UniRef50_Q31J36 Cluster: Cation diffusion facilitator (CDF) family
transporter precursor; n=2; Gammaproteobacteria|Rep:
Cation diffusion facilitator (CDF) family transporter
precursor - Thiomicrospira crunogena (strain XCL-2)
Length = 310
Score = 31.9 bits (69), Expect = 3.5
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 238 LCSSSFHYVLSIGAVFAI-IGGLLTDILYLQAFIKFL 345
+ S S HYV +GA FA+ IG LL L++ AF+ L
Sbjct: 155 ITSDSLHYVSDLGANFAVLIGLLLVSWLWVDAFLGLL 191
>UniRef50_P55682 Cluster: Uncharacterized transporter y4wD; n=2;
Alphaproteobacteria|Rep: Uncharacterized transporter
y4wD - Rhizobium sp. (strain NGR234)
Length = 377
Score = 31.9 bits (69), Expect = 3.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 247 SSFHYVLSIGAVFAIIGGLLTDILYLQAFIKFLYT 351
SSFH + S+GAV GG + + ++ FL T
Sbjct: 132 SSFHAMWSVGAVLGAAGGYIATVFQTPVYVHFLVT 166
>UniRef50_P02209 Cluster: Globin-3; n=5; Myxinidae|Rep: Globin-3 -
Myxine glutinosa (Atlantic hagfish)
Length = 149
Score = 31.9 bits (69), Expect = 3.5
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 80 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 238
K + L+T H T+ NP++ L VF+ T+GG S I L TY
Sbjct: 95 KYLKDLSTKHSTEFQVNPDMFKELSAVFVSTMGGKAAYEKLFSIIATLLRSTY 147
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 31.5 bits (68), Expect = 4.6
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 158 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHF 256
+ LF GG G+I A+ +I++ +H+T ++ HF
Sbjct: 359 MILFAFGGAGGLINASYNINLVVHNTSWISGHF 391
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 31.5 bits (68), Expect = 4.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 164 LFTVGGLTGVILANSSIDITLHDTYYVVAHF 256
+F GG +G++ A +I+ +H+T +V HF
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHF 388
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 158 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHF 256
+ F GG+ G+I A+ ++ +H+T +VV HF
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHF 385
>UniRef50_A5FDI9 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium johnsoniae UW101|Rep: Putative
uncharacterized protein - Flavobacterium johnsoniae
UW101
Length = 159
Score = 30.7 bits (66), Expect = 8.0
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 203 NSSIDITLHDTYYVVAHF--IMFYQ*EQYLQLLG 298
+++ DI +HDTY+V+ HF +F YL LG
Sbjct: 36 DNTFDINVHDTYFVIGHFYVALFLSLGYYLTGLG 69
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,479,970
Number of Sequences: 1657284
Number of extensions: 3218533
Number of successful extensions: 6528
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 6374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6507
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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