Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1071
         (359 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    29   0.014
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   6.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    20   6.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   8.8  

>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 29.1 bits (62), Expect = 0.014
 Identities = 17/37 (45%), Positives = 18/37 (48%)
 Frame = +1

Query: 142 MKIRFCIFIHSRRINRCNFSQFFXXXXXXXXLLCSSS 252
           M  R CI I S R N  NFS+F         LL SSS
Sbjct: 1   MSTRICIPISSGRTNGSNFSKFINCHYTSGHLLGSSS 37


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 108 CIVASHLKILIPVGTAIIIVAEVK 37
           CI+ + L+ILI V    + + E K
Sbjct: 285 CILTNTLEILITVTVCELTILEYK 308


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 108 CIVASHLKILIPVGTAIIIVAEVK 37
           CI+ + L+ILI V    + + E K
Sbjct: 110 CILTNTLEILITVTVCELTILEYK 133


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 181 INRCNFSQF 207
           +NRC FS+F
Sbjct: 741 MNRCKFSEF 749


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,098
Number of Sequences: 336
Number of extensions: 929
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)