Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1071
         (359 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0967 + 29265465-29266214,29267718-29267944,29268428-292685...    27   4.4  
10_08_0135 - 15118082-15118300,15118388-15118546,15118783-151188...    26   7.7  

>03_05_0967 +
           29265465-29266214,29267718-29267944,29268428-29268557,
           29268651-29268719,29268803-29268946,29269775-29270011,
           29270897-29270998,29271131-29271396,29271766-29273410,
           29274449-29275018
          Length = 1379

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 270 NRSSICNYWGIIN*YPLFTGF 332
           +R ++C+ WG+ + YPL T F
Sbjct: 441 HRQNLCSRWGLAHPYPLSTPF 461


>10_08_0135 -
           15118082-15118300,15118388-15118546,15118783-15118849,
           15118969-15119141,15119602-15119698,15119782-15119900,
           15120000-15120140,15120214-15120298,15120411-15120612,
           15120906-15120970,15121365-15121654
          Length = 538

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 259 YVLSIGAVFAIIGGLLTDIL 318
           Y++S GAVFA+I  L+  IL
Sbjct: 392 YIISTGAVFALIASLIGAIL 411


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,725,862
Number of Sequences: 37544
Number of extensions: 74421
Number of successful extensions: 103
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)