Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1065
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    39   0.002
Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    36   0.015
Z77660-9|CAB01179.1|  602|Caenorhabditis elegans Hypothetical pr...    36   0.015
AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical ...    35   0.034
L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical pr...    33   0.10 
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    32   0.24 
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    30   0.95 
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       30   0.95 
Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AC006830-2|AAK68611.2|  293|Caenorhabditis elegans Serpentine re...    29   2.9  
AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.      28   3.9  
AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.      28   3.9  
AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1 suppres...    28   3.9  
AC024810-18|ABC71796.1|  787|Caenorhabditis elegans Abnormal cel...    27   6.7  
AB212859-1|BAE66674.1|  787|Caenorhabditis elegans COGC-1 protein.     27   6.7  
U80842-9|AAB37945.2|  258|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ...    27   8.9  

>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMF--QMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 406
           I  H++VLS CSPYF  MF  QM       + ++++    L  L++F Y G + +
Sbjct: 67  INAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTLEALIEFCYTGAIAI 121


>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 36.3 bits (80), Expect = 0.015
 Identities = 15/55 (27%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFQMNPTQHPI--VFLKDVSHSALRDLLQFMYQGEVNV 406
           ++ HK++L+   PYF+ MF ++  +  +  + ++D+++  +  LL F Y GE+ +
Sbjct: 62  LSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYETVDALLSFAYTGELRI 116


>Z77660-9|CAB01179.1|  602|Caenorhabditis elegans Hypothetical
           protein F38H4.7 protein.
          Length = 602

 Score = 36.3 bits (80), Expect = 0.015
 Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFQ--MNP--TQHPI-VFLKDVSHSALRDLLQFMYQGEVNVKP 412
           I  HK VLS+ S  F  MF   + P  T+  + + L DV  SA   LL+F+Y  EV ++ 
Sbjct: 204 IPAHKFVLSIGSVVFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKIEA 263

Query: 413 E 415
           E
Sbjct: 264 E 264


>AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical
           protein Y75B12B.4 protein.
          Length = 320

 Score = 35.1 bits (77), Expect = 0.034
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +2

Query: 260 KLVLSVCSPYFQEMFQMNPTQHPIVFLK--DVSHSALRDLLQFMYQGEVNVKPED*HHLL 433
           K VL+  S +FQ+MF  N  +     +K  DV+HS   DLL  +Y   + +   +  HLL
Sbjct: 175 KQVLATSSQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLNVIYPTHMLINSSNVSHLL 234


>L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical
           protein C50C3.8 protein.
          Length = 410

 Score = 33.5 bits (73), Expect = 0.10
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFQ---MNPTQHPIVFLKDVSHSALRDLLQFMYQG 394
           I  H+ +L   SP F+ MF    M   Q   + ++D  + ++R +++FMY G
Sbjct: 230 IKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMYTG 281


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 32.3 bits (70), Expect = 0.24
 Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFQMNPTQHPIVFL----KDVSHSALRDLLQFMYQGEVNV 406
           ++ HK++L+   PYF+ MF ++  +  +  +     D+++  +  LL F Y GE+ +
Sbjct: 62  LSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMNYETVDALLSFAYTGELRI 118


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFQMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVN 403
           I  HK VL+  SP F  M     T   +  ++++ D+ +  + +++ ++Y G  N
Sbjct: 212 IRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCN 266


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFQMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVN 403
           I  HK VL+  SP F  M     T   +  ++++ D+ +  + +++ ++Y G  N
Sbjct: 212 IRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCN 266


>Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical
           protein F27C8.5 protein.
          Length = 565

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +2

Query: 233 LPKXFIATHKLVLSVCSPYFQEMFQMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKP 412
           L   F   H +V+   S  F E F      +    + D    ++R +  +MY GE+++ P
Sbjct: 41  LKTGFDMVHSVVICAHSDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGEIDI-P 99

Query: 413 E 415
           E
Sbjct: 100 E 100


>AC006830-2|AAK68611.2|  293|Caenorhabditis elegans Serpentine
           receptor, class sx protein40 protein.
          Length = 293

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 267 TNLCVAINXFGSQRYVYEIST 205
           +N+CV  N FG   Y+Y++ST
Sbjct: 154 SNICVLSNCFGDAYYLYKVST 174


>AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +2

Query: 251 ATHKLVLSVCSPYFQEMFQMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
           A H+ +L+  SPYF  +F+        + +   S       L +MY G V
Sbjct: 54  AAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTV 103


>AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +2

Query: 251 ATHKLVLSVCSPYFQEMFQMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
           A H+ +L+  SPYF  +F+        + +   S       L +MY G V
Sbjct: 54  AAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTV 103


>AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1
           suppressor/dio uptake defective/raf enhancer protein 1
           protein.
          Length = 909

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +2

Query: 251 ATHKLVLSVCSPYFQEMFQMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
           A H+ +L+  SPYF  +F+        + +   S       L +MY G V
Sbjct: 54  AAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTV 103


>AC024810-18|ABC71796.1|  787|Caenorhabditis elegans Abnormal cell
           migration protein 30 protein.
          Length = 787

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 230 WLPKXFIATHKLVLSVCSPYFQEMFQM 310
           W+ K    THKLV  VC  YF  + Q+
Sbjct: 299 WIEKTCAVTHKLVAEVCE-YFDNLDQI 324


>AB212859-1|BAE66674.1|  787|Caenorhabditis elegans COGC-1 protein.
          Length = 787

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 230 WLPKXFIATHKLVLSVCSPYFQEMFQM 310
           W+ K    THKLV  VC  YF  + Q+
Sbjct: 299 WIEKTCAVTHKLVAEVCE-YFDNLDQI 324


>U80842-9|AAB37945.2|  258|Caenorhabditis elegans Hypothetical
           protein ZC239.6 protein.
          Length = 258

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +2

Query: 239 KXFIATHKLVLSVCSPYFQ---EMFQMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVK 409
           K F+ T K  L+    YF+   E+ Q+NPT  PI   +   H     +L FM  G+V++ 
Sbjct: 9   KEFV-TSKATLTKFDGYFKNLPEIQQVNPTS-PIFVDRSPKH--FETILNFMRDGDVDLP 64

Query: 410 PED*HHLL 433
            E  + LL
Sbjct: 65  QEYLNQLL 72


>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
            protein Y38C9A.1 protein.
          Length = 1484

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 218  TRSPRDSRP*KPADIFAWKLFQHSENCSSDAM 123
            TRSP+  +P KP    ++  FQ+S + SS A+
Sbjct: 1362 TRSPQVQKPIKPTASRSFTSFQNSPSTSSSAL 1393


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,678,047
Number of Sequences: 27780
Number of extensions: 247662
Number of successful extensions: 564
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)