Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1065
(548 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 44 9e-05
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 44 9e-05
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 37 0.008
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 37 0.008
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 35 0.041
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 32 0.22
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 31 0.67
At4g04090.1 68417.m00578 speckle-type POZ protein-related contai... 29 2.0
At5g48510.1 68418.m05998 speckle-type POZ protein-related contai... 28 3.6
At2g40440.1 68415.m04990 BTB/POZ domain-containing protein conta... 28 3.6
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 43.6 bits (98), Expect = 9e-05
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +2
Query: 254 THKLVLSVCSPYFQEMFQ--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVK 409
+HK++LS+ S F +MF M+ + ++L DVS A + ++ FMY GE+N++
Sbjct: 366 SHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNME 419
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 43.6 bits (98), Expect = 9e-05
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +2
Query: 254 THKLVLSVCSPYFQEMFQ--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVK 409
+HK++LS+ S F +MF M+ + ++L DVS A + ++ FMY GE+N++
Sbjct: 366 SHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNME 419
>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF---QMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
I THK VL+ S F+ M + + + L D+SH L+ LL+F+Y G +
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNL 90
>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF---QMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
I THK VL+ S F+ M + + + L D+SH L+ LL+F+Y G +
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNL 90
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 34.7 bits (76), Expect = 0.041
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 245 FIATHKLVLSVCSPYFQ-EMFQMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKPED 418
F+A HKLVL+ SP+F+ + F + V + D+ + LLQFMY+ + PED
Sbjct: 209 FLA-HKLVLAARSPFFKSKFFSEFEANNTEVTINDLEPKVFKALLQFMYKDSL---PED 263
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 32.3 bits (70), Expect = 0.22
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFQ--MNPTQHPIVFLKDVSHSALRDLLQFMYQGE 397
I HK VL SP F+ M + M + + + DVS+ ALR + ++Y E
Sbjct: 80 IPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAE 131
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 30.7 bits (66), Expect = 0.67
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFQMNPTQ-HPIVFLKDVSHSALRDLLQFMYQ 391
HKLVL+ S +F+ MF + + V + D+ + LL FMY+
Sbjct: 219 HKLVLAARSQFFRSMFYNTLAENNSDVVISDLEPKVFKALLHFMYK 264
>At4g04090.1 68417.m00578 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 192
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFQMN----PTQHPIVFLKDVSHSALRDLLQFMY 388
I+ HK +LS S F+EMF+ + ++ + L ++ H L + F Y
Sbjct: 38 ISAHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEAFVDFTY 88
>At5g48510.1 68418.m05998 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 224
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFQMN----PTQH-PIVFLKDVSHSALRDLLQFM 385
I+ HKL+L+ S F+ MF+++ T+H + L ++ H L ++F+
Sbjct: 39 ISAHKLILASRSEVFKNMFELDEFKTSTKHVETITLSEMKHEELEAFVEFI 89
>At2g40440.1 68415.m04990 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain;
Length = 194
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQEMFQMN----PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKPED 418
+ HKLVLS S F++M + + Q + L ++ H L ++F+Y + ++
Sbjct: 41 SAHKLVLSARSEVFKKMLESDEIKASAQLETITLCEMKHEELEAFIEFIYSDGSMLSAKE 100
Query: 419 *HHLLVQR 442
H + +
Sbjct: 101 KQHKMANK 108
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,806,494
Number of Sequences: 28952
Number of extensions: 226185
Number of successful extensions: 487
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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