Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1060
(399 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 22 1.9
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 2.6
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 4.5
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 4.5
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 5.9
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 21 5.9
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 5.9
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 20 7.8
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 20 7.8
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 20 7.8
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 20 7.8
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 20 7.8
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 22.2 bits (45), Expect = 1.9
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 179 SPSCRSDGIPTPECSSANPRLENSS 253
SPS +PT S++NP + S
Sbjct: 76 SPSSTPSSLPTQRTSTSNPTYSSRS 100
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 2.6
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = -2
Query: 335 EACKVFHICIRVHVLHCKTWPQXRQTP 255
E+C F++C+ H++ P P
Sbjct: 1216 ESCSSFYVCVNGHLVPQNCAPGLHYNP 1242
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 4.5
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -1
Query: 243 SRRGFADE-HSGVGMPSLLHEGD-L*WPLSFHYG 148
S+ G A H G +P H GD L P H G
Sbjct: 110 SKMGLAPTGHPGAALPFFCHNGDPLSQPPPAHMG 143
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 4.5
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -1
Query: 243 SRRGFADE-HSGVGMPSLLHEGD-L*WPLSFHYG 148
S+ G A H G +P H GD L P H G
Sbjct: 2 SKMGLAPTGHPGAALPFFCHNGDPLSQPPPAHMG 35
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 167 GHHKSPSCRSDGIP 208
GHH+ S DG+P
Sbjct: 137 GHHQKNSPYMDGVP 150
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -1
Query: 153 YGSRHFSTGVALVHH 109
YGS H +G HH
Sbjct: 11 YGSHHHQSGSVAGHH 25
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 20.6 bits (41), Expect = 5.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 200 GIPTPECSSANPRLENSSE 256
GIPTP S++ P + E
Sbjct: 223 GIPTPSTSASPPTVNIKKE 241
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 20.2 bits (40), Expect = 7.8
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 120 AQHLLKSGVTRNEMIAAITNRLH 188
A HLL + +N+ + A R+H
Sbjct: 170 ALHLLVDYMKKNKTLGAACGRIH 192
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 20.2 bits (40), Expect = 7.8
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 120 AQHLLKSGVTRNEMIAAITNRLH 188
A HLL + +N+ + A R+H
Sbjct: 484 ALHLLVDYMKKNKTLGAACGRIH 506
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.2 bits (40), Expect = 7.8
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 120 AQHLLKSGVTRNEMIAAITNRLH 188
A HLL + +N+ + A R+H
Sbjct: 717 ALHLLVDYMKKNKTLGAACGRIH 739
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 20.2 bits (40), Expect = 7.8
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 120 AQHLLKSGVTRNEMIAAITNRLH 188
A HLL + +N+ + A R+H
Sbjct: 717 ALHLLVDYMKKNKTLGAACGRIH 739
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 20.2 bits (40), Expect = 7.8
Identities = 8/29 (27%), Positives = 10/29 (34%)
Frame = +2
Query: 173 HKSPSCRSDGIPTPECSSANPRLENSSEE 259
H CR+ P S PR N +
Sbjct: 926 HAGSPCRNSASPASSDRSGTPRSTNGDRK 954
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,961
Number of Sequences: 336
Number of extensions: 1325
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8541369
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -