Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1007
         (648 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0659 - 18453778-18453903,18453976-18454963,18455496-184562...    33   0.20 
04_01_0438 - 5723451-5723759,5723795-5723863,5724025-5724210,572...    31   0.79 
01_06_0665 - 31003333-31003680,31003773-31003854,31004068-310041...    30   1.8  
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850...    29   3.2  

>04_03_0659 -
           18453778-18453903,18453976-18454963,18455496-18456229,
           18456292-18456360,18456528-18456605,18456703-18456789,
           18456881-18456931,18457021-18457092,18457177-18457304,
           18458194-18458275,18458705-18458754,18459043-18459096,
           18459586-18459675,18459903-18459983,18460443-18460538,
           18460960-18461022,18461313-18461402,18461630-18461698,
           18462051-18462291
          Length = 1082

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 19/73 (26%), Positives = 34/73 (46%)
 Frame = +3

Query: 252 KVSXSKLHKESTAKKDLRPSSAISFSKSDHGPETTSSTEQLRQYKSWVSNERWNELKKIA 431
           K    ++HKE T K +   S  +S SKS      TS+ E+ ++ K  +S     ++ ++ 
Sbjct: 133 KAIAERIHKEYTTKVNKHESRTVSNSKSKEQLIRTSNIEEKQKRKQIISENNSKDMTQVQ 192

Query: 432 ETAMKQRKVFMIK 470
             A +  K +  K
Sbjct: 193 ANAEEFHKEYTTK 205


>04_01_0438 -
           5723451-5723759,5723795-5723863,5724025-5724210,
           5724297-5724558,5724662-5724960,5725040-5725453,
           5725533-5725899,5726002-5726146,5726562-5727558
          Length = 1015

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 19/74 (25%), Positives = 33/74 (44%)
 Frame = +3

Query: 216 NEIHGCNDGIRGKVSXSKLHKESTAKKDLRPSSAISFSKSDHGPETTSSTEQLRQYKSWV 395
           NE+    D + GK S  +  + + A  D  P  A+    +D       + EQ+R++  W+
Sbjct: 15  NELWKRLDELTGKCSDQRATRPAAAVPD--PPQALGALPTDSVTLVRRTGEQIRKFSQWI 72

Query: 396 SNERWNELKKIAET 437
            NE   +  K  +T
Sbjct: 73  ENEPKEKWAKTYDT 86


>01_06_0665 -
           31003333-31003680,31003773-31003854,31004068-31004198,
           31004272-31004370,31004511-31004666,31004877-31004951,
           31005554-31005736,31005833-31005983,31006732-31007027
          Length = 506

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +1

Query: 184 RSQKFQKREGRTRSMAVMMELEERYXTPSSTKR 282
           RS++  + E R R+ AV+ E+E+R+ TP++  R
Sbjct: 32  RSKREAEEERRRRAAAVIEEVEQRFSTPTALLR 64


>08_01_0871 +
           8502396-8502417,8503606-8503732,8503891-8503990,
           8504725-8504793,8504870-8505043,8505196-8505373,
           8505462-8505594,8505702-8505864,8507031-8507181,
           8507266-8507366,8507633-8507788,8508105-8508173,
           8508256-8508324,8508403-8508540,8508639-8508767,
           8509013-8509053,8510019-8510106,8510199-8510339,
           8510428-8510553,8510671-8510736,8510994-8511291,
           8511387-8511595,8511689-8511802
          Length = 953

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 408 WNELKKIAETAMKQRKVFMIKGGGFPAI 491
           W+  K +      QRK+ ++KGGG PA+
Sbjct: 719 WDSAKSLMHGNSYQRKLSIVKGGGSPAL 746


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,896,356
Number of Sequences: 37544
Number of extensions: 284230
Number of successful extensions: 684
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)