Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1006
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    25   0.69 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    24   1.2  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   3.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.9  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   8.5  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +2

Query: 224 CLGLSLWTWSRDNGLCTLGTIR 289
           CLG  LWT  RD G    GT R
Sbjct: 448 CLGGELWTVLRDKGHFDDGTTR 469


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 381 VDSVLDVVRKEAEGCDCLQG 440
           +DS+++++R   + CD L G
Sbjct: 106 IDSIINIIRVRVDACDRLWG 125


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
 Frame = -3

Query: 384 LPAPRLRCSDP*PSC-CQHP---IAQRQSCPDGRSDRMVPSVQ---SPLSRLQV 244
           LPAPR+    P  SC C      ++    C +  S  +VP+ Q    P  RL++
Sbjct: 48  LPAPRINSKSPLLSCACPDGLKLLSDGLMCVEKVSTTIVPTTQEINKPFKRLEL 101


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 530 IMNTFSIVPSPKVSDTVVEPYNATLSVHQLVEN 628
           I + F ++ +PKVS+       ATLS  +++ N
Sbjct: 546 IRSFFELLQNPKVSNEQFLNTAATLSFCEMIHN 578


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 384 LPAPRLRCSDP*PSCCQHPIAQRQSCPDG 298
           LPAPR+    P  SC         +CPDG
Sbjct: 48  LPAPRINSKSPLLSC---------ACPDG 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,950
Number of Sequences: 438
Number of extensions: 4516
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)