Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1006
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 140 1e-33
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 140 1e-33
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 140 1e-33
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 139 1e-33
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 138 3e-33
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 137 6e-33
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 136 1e-32
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 136 1e-32
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 136 2e-32
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 72 4e-13
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 72 4e-13
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 72 4e-13
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 72 4e-13
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 72 4e-13
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 72 4e-13
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 71 7e-13
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 71 7e-13
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 71 1e-12
At4g37190.1 68417.m05265 expressed protein 34 0.079
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 30 1.3
At1g27070.1 68414.m03300 5'-AMP-activated protein kinase-related... 29 3.0
At4g11390.1 68417.m01837 DC1 domain-containing protein contains ... 29 3.9
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 28 6.8
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 28 6.8
At1g14790.1 68414.m01768 RNA-dependent RNA polymerase, putative ... 28 6.8
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 140 bits (338), Expect = 1e-33
Identities = 61/64 (95%), Positives = 63/64 (98%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCL 434
GTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCL
Sbjct: 71 GTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCL 130
Query: 435 QGFQ 446
QGFQ
Sbjct: 131 QGFQ 134
Score = 128 bits (309), Expect = 3e-30
Identities = 54/71 (76%), Positives = 64/71 (90%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y G++DLQLER+NVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 226 PRAILVDLEPG 258
PRA+L+DLEPG
Sbjct: 61 PRAVLMDLEPG 71
Score = 118 bits (283), Expect = 5e-27
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +2
Query: 509 REEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTL 688
REEYPDR+M TFS+ PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTL
Sbjct: 156 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 215
Query: 689 KLT 697
KLT
Sbjct: 216 KLT 218
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 140 bits (338), Expect = 1e-33
Identities = 61/64 (95%), Positives = 63/64 (98%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCL 434
GTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCL
Sbjct: 71 GTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCL 130
Query: 435 QGFQ 446
QGFQ
Sbjct: 131 QGFQ 134
Score = 131 bits (316), Expect = 5e-31
Identities = 58/71 (81%), Positives = 64/71 (90%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEVI EHGID TG GD+DLQLERINVY+NEA+GGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 226 PRAILVDLEPG 258
PRA+L+DLEPG
Sbjct: 61 PRAVLMDLEPG 71
Score = 116 bits (279), Expect = 2e-26
Identities = 53/62 (85%), Positives = 56/62 (90%)
Frame = +2
Query: 509 REEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTL 688
REEYPDR+M TFS+ PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTL
Sbjct: 156 REEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 215
Query: 689 KL 694
KL
Sbjct: 216 KL 217
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 140 bits (338), Expect = 1e-33
Identities = 61/64 (95%), Positives = 63/64 (98%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCL 434
GTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCL
Sbjct: 71 GTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCL 130
Query: 435 QGFQ 446
QGFQ
Sbjct: 131 QGFQ 134
Score = 128 bits (310), Expect = 3e-30
Identities = 55/71 (77%), Positives = 65/71 (91%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIG+KFWEV++ EHGID TG Y GDS+LQLER+NVYYNEA+ G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 226 PRAILVDLEPG 258
PRA+L+DLEPG
Sbjct: 61 PRAVLMDLEPG 71
Score = 116 bits (280), Expect = 1e-26
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +2
Query: 509 REEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTL 688
REEYPDR+M TFS+ PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTL
Sbjct: 156 REEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 215
Query: 689 KLT 697
KL+
Sbjct: 216 KLS 218
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 139 bits (337), Expect = 1e-33
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCL 434
GTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE CDCL
Sbjct: 72 GTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCL 131
Query: 435 QGFQ 446
QGFQ
Sbjct: 132 QGFQ 135
Score = 133 bits (321), Expect = 1e-31
Identities = 59/72 (81%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGD-SDLQLERINVYYNEATGGKY 222
MREI+HIQ GQCGNQIG+KFWEVI DEHGID TG Y GD +DLQLERINVYYNEA+GG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 223 VPRAILVDLEPG 258
VPRA+L+DLEPG
Sbjct: 61 VPRAVLMDLEPG 72
Score = 116 bits (279), Expect = 2e-26
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +2
Query: 509 REEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTL 688
REEYPDR+M TFS+ PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTL
Sbjct: 157 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 216
Query: 689 KLT 697
KL+
Sbjct: 217 KLS 219
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 138 bits (334), Expect = 3e-33
Identities = 59/64 (92%), Positives = 63/64 (98%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCL 434
GTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE CDCL
Sbjct: 72 GTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCL 131
Query: 435 QGFQ 446
QGFQ
Sbjct: 132 QGFQ 135
Score = 137 bits (332), Expect = 6e-33
Identities = 59/72 (81%), Positives = 68/72 (94%), Gaps = 1/72 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDS-DLQLERINVYYNEATGGKY 222
MREI+H+Q GQCGNQIG+KFWEVI DEHG+DPTG Y+GDS DLQLERINVYYNEA+GG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 223 VPRAILVDLEPG 258
VPRA+L+DLEPG
Sbjct: 61 VPRAVLMDLEPG 72
Score = 116 bits (279), Expect = 2e-26
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +2
Query: 509 REEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTL 688
REEYPDR+M TFS+ PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTL
Sbjct: 157 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 216
Query: 689 KLT 697
KL+
Sbjct: 217 KLS 219
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 137 bits (332), Expect = 6e-33
Identities = 59/64 (92%), Positives = 63/64 (98%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCL 434
GTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE CDCL
Sbjct: 71 GTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCL 130
Query: 435 QGFQ 446
QGFQ
Sbjct: 131 QGFQ 134
Score = 135 bits (326), Expect = 3e-32
Identities = 58/71 (81%), Positives = 66/71 (92%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIG+KFWEV+ DEHGIDPTG Y G+SDLQLER+NVYYNEA+ G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 226 PRAILVDLEPG 258
PRAIL+DLEPG
Sbjct: 61 PRAILMDLEPG 71
Score = 118 bits (283), Expect = 5e-27
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +2
Query: 509 REEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTL 688
REEYPDR+M TFS+ PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTL
Sbjct: 156 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 215
Query: 689 KLT 697
KLT
Sbjct: 216 KLT 218
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 136 bits (330), Expect = 1e-32
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCL 434
GTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCL
Sbjct: 71 GTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCL 130
Query: 435 QGFQ 446
QGFQ
Sbjct: 131 QGFQ 134
Score = 134 bits (323), Expect = 7e-32
Identities = 58/71 (81%), Positives = 65/71 (91%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEV+ EHGIDPTG Y GDSDLQLERINVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 226 PRAILVDLEPG 258
PRA+L+DLEPG
Sbjct: 61 PRAVLMDLEPG 71
Score = 118 bits (283), Expect = 5e-27
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +2
Query: 509 REEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTL 688
REEYPDR+M TFS+ PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTL
Sbjct: 156 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 215
Query: 689 KLT 697
KLT
Sbjct: 216 KLT 218
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 136 bits (330), Expect = 1e-32
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCL 434
GTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCL
Sbjct: 71 GTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCL 130
Query: 435 QGFQ 446
QGFQ
Sbjct: 131 QGFQ 134
Score = 134 bits (323), Expect = 7e-32
Identities = 58/71 (81%), Positives = 65/71 (91%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEV+ EHGIDPTG Y GDSDLQLERINVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 226 PRAILVDLEPG 258
PRA+L+DLEPG
Sbjct: 61 PRAVLMDLEPG 71
Score = 118 bits (283), Expect = 5e-27
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +2
Query: 509 REEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTL 688
REEYPDR+M TFS+ PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTL
Sbjct: 156 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 215
Query: 689 KLT 697
KLT
Sbjct: 216 KLT 218
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 136 bits (328), Expect = 2e-32
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCL 434
GTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE DCL
Sbjct: 71 GTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCL 130
Query: 435 QGFQ 446
QGFQ
Sbjct: 131 QGFQ 134
Score = 133 bits (322), Expect = 9e-32
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDS LQLERI+VY+NEA+GGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 226 PRAILVDLEPG 258
PRA+L+DLEPG
Sbjct: 61 PRAVLMDLEPG 71
Score = 116 bits (279), Expect = 2e-26
Identities = 53/62 (85%), Positives = 56/62 (90%)
Frame = +2
Query: 509 REEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTL 688
REEYPDR+M TFS+ PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTL
Sbjct: 156 REEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 215
Query: 689 KL 694
KL
Sbjct: 216 KL 217
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 71.7 bits (168), Expect = 4e-13
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQG 440
+D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK A+ C LQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQG 134
Query: 441 F 443
F
Sbjct: 135 F 135
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 542 FSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKL 694
F+I PSP+VS VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L +
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI 219
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 219
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 71.7 bits (168), Expect = 4e-13
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQG 440
+D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK A+ C LQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQG 134
Query: 441 F 443
F
Sbjct: 135 F 135
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 542 FSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKL 694
F+I PSP+VS VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L +
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI 219
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 219
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/51 (58%), Positives = 41/51 (80%)
Frame = +2
Query: 542 FSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKL 694
F++ PSP+VS +VVEPYN+ LS H L+E+TD S +DNEA+YDIC R+L +
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNI 219
Score = 70.9 bits (166), Expect = 7e-13
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQG 440
+D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A+ C LQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134
Query: 441 F 443
F
Sbjct: 135 F 135
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/51 (58%), Positives = 41/51 (80%)
Frame = +2
Query: 542 FSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKL 694
F++ PSP+VS +VVEPYN+ LS H L+E+TD S +DNEA+YDIC R+L +
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNI 219
Score = 70.9 bits (166), Expect = 7e-13
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQG 440
+D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A+ C LQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134
Query: 441 F 443
F
Sbjct: 135 F 135
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/51 (58%), Positives = 41/51 (80%)
Frame = +2
Query: 542 FSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKL 694
F++ PSP+VS +VVEPYN+ LS H L+E+TD S +DNEA+YDIC R+L +
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSI 219
Score = 70.9 bits (166), Expect = 7e-13
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQG 440
+D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A+ C LQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134
Query: 441 F 443
F
Sbjct: 135 F 135
Score = 64.5 bits (150), Expect = 6e-11
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/51 (58%), Positives = 41/51 (80%)
Frame = +2
Query: 542 FSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKL 694
F++ PSP+VS +VVEPYN+ LS H L+E+TD S +DNEA+YDIC R+L +
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSI 219
Score = 70.9 bits (166), Expect = 7e-13
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQG 440
+D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A+ C LQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134
Query: 441 F 443
F
Sbjct: 135 F 135
Score = 64.5 bits (150), Expect = 6e-11
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/69 (44%), Positives = 45/69 (65%)
Frame = +1
Query: 49 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 228
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 229 RAILVDLEP 255
RA+L+DLEP
Sbjct: 63 RALLIDLEP 71
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCL 434
++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +EA+G D L
Sbjct: 74 INGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSL 132
Query: 435 QGF 443
+GF
Sbjct: 133 EGF 135
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 512 EEYPDRIMNTFSIVPSP-KVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTL 688
+ Y +++ T+S+ P+ + SD VV+PYN+ L++ +L N D +DN AL I L
Sbjct: 159 DRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERL 218
Query: 689 KLT 697
LT
Sbjct: 219 HLT 221
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/69 (44%), Positives = 45/69 (65%)
Frame = +1
Query: 49 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 228
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 229 RAILVDLEP 255
RA+L+DLEP
Sbjct: 63 RALLIDLEP 71
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCL 434
++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +EA+G D L
Sbjct: 74 INGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSL 132
Query: 435 QGF 443
+GF
Sbjct: 133 EGF 135
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 512 EEYPDRIMNTFSIVPSP-KVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTL 688
+ Y +++ T+S+ P+ + SD VV+PYN+ L++ +L N D +DN AL I L
Sbjct: 159 DRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERL 218
Query: 689 KLT 697
LT
Sbjct: 219 HLT 221
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 219
MREI+ I GQ G Q+G WE+ EHGI P GT DS + + N +++E + G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ +DLEP
Sbjct: 61 HVPRAVFLDLEP 72
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/61 (47%), Positives = 43/61 (70%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQG 440
+D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK A+ C LQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQG 134
Query: 441 F 443
F
Sbjct: 135 F 135
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +2
Query: 542 FSIVPSPKVSDTVVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKL 694
F+I PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L +
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDI 219
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 34.3 bits (75), Expect = 0.079
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGI------DPTGTYHG-DSDLQLERINVYYNE 204
MREIV IQ G+ N +G+ FW + G+ DP H D D+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 205 ATGGKYVPRAILVDLEPGQWTLYAR 279
AT Y PR + V+L+ T+ +R
Sbjct: 61 AT---YTPRLVSVNLKGALGTMSSR 82
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 378 LVDSVLDVVRKEAEGCDCLQGF 443
+++SV VVRKEAE C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At1g27070.1 68414.m03300 5'-AMP-activated protein kinase-related
contains weak similarity to Swiss-Prot:Q9QZH4
5'-AMP-activated protein kinase, beta-2 subunit (AMPK
beta-2 chain) [Rattus norvegicus]
Length = 532
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -1
Query: 401 YIEHRIYQLRAFGVVTLSPVVASTRLPKDKVVRTED 294
+I+HR+ QL++ LS V+ S R P DKVV ++D
Sbjct: 350 HIKHRLQQLQS----ELSSVLHSLRSPPDKVVTSKD 381
>At4g11390.1 68417.m01837 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 514
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 184 INVYYNEATGGKYVPRAILVDLEPGQWTLYARDHSVRSSVRTTLSLGN 327
+++ Y E GKY +L P W ++DH R+S+ T LG+
Sbjct: 320 LSLCYGEKASGKYWCDICEKELNPSTWFYTSKDH--RASLHTKCVLGD 365
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 94 GAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILV 243
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 52 EIVHIQAGQCGNQIGAKFWEVISD 123
+I++ A + G+ GA FWEVIS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At1g14790.1 68414.m01768 RNA-dependent RNA polymerase, putative
similar to RNA-directed RNA polymerase GB:CAA09697
GI:4138282 [Nicotiana tabacum]
Length = 1107
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 443 PVDSLTWRRNRSWSWNVTHFQNREEYPDRIMNTFS 547
P+D +T R+W + H +N +Y R+ +FS
Sbjct: 470 PIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFS 504
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,831,390
Number of Sequences: 28952
Number of extensions: 350299
Number of successful extensions: 1036
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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