Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1004
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77660-9|CAB01179.1|  602|Caenorhabditis elegans Hypothetical pr...    40   0.002
AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    39   0.003
Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical pr...    38   0.006
Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    35   0.043
L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical pr...    34   0.100
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    32   0.30 
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       32   0.30 
AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical ...    32   0.40 
U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical pr...    31   0.53 
U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical pr...    31   0.53 
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    30   1.2  
AC006830-2|AAK68611.2|  293|Caenorhabditis elegans Serpentine re...    28   6.6  
U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z77660-9|CAB01179.1|  602|Caenorhabditis elegans Hypothetical
           protein F38H4.7 protein.
          Length = 602

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
 Frame = +2

Query: 248 IATHKLVLSVCSPXFQEMF-----XMNPTQHPXVFLKDVSHSALRDLLQFMYXGEVNVKX 412
           I  HK VLS+ S  F  MF       N  +   + L DV  SA   LL+F+Y  EV ++ 
Sbjct: 204 IPAHKFVLSIGSVVFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKIEA 263

Query: 413 EELASFISTAXQLQVKGL 466
           E + + + TA +  V  +
Sbjct: 264 ESVMTTLYTAKKYAVPAM 281


>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = +2

Query: 248 IATHKLVLSVCSPXFQEMF--XMNPTQHPXVFLKDVSHSALRDLLQFMYXGEVNVKXEEL 421
           I  H++VLS CSP F  MF   M       + ++++    L  L++F Y G + +    +
Sbjct: 67  INAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTLEALIEFCYTGAIAIDDSNV 126

Query: 422 ASFISTAXQLQV 457
              +  A  LQ+
Sbjct: 127 QDILPAACLLQI 138


>Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical
           protein F27C8.5 protein.
          Length = 565

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 19/75 (25%), Positives = 34/75 (45%)
 Frame = +2

Query: 233 LPXGFIATHKLVLSVCSPXFQEMFXMNPTQHPXVFLKDVSHSALRDLLQFMYXGEVNVKX 412
           L  GF   H +V+   S  F E F      +    + D    ++R +  +MY GE+++  
Sbjct: 41  LKTGFDMVHSVVICAHSDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGEIDIPE 100

Query: 413 EELASFISTAXQLQV 457
             +A  ++ A  L+V
Sbjct: 101 TTIADVLAVASYLRV 115


>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = +2

Query: 248 IATHKLVLSVCSPXFQEMFXMN--PTQHPXVFLKDVSHSALRDLLQFMYXGEVNVKXEEL 421
           ++ HK++L+   P F+ MF ++        + ++D+++  +  LL F Y GE+ +    +
Sbjct: 62  LSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYETVDALLSFAYTGELRITTSNV 121

Query: 422 ASFISTAXQLQV 457
            S +  A   Q+
Sbjct: 122 QSIMLGANFFQM 133


>L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical
           protein C50C3.8 protein.
          Length = 410

 Score = 33.9 bits (74), Expect = 0.100
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +2

Query: 248 IATHKLVLSVCSPXFQEMFX---MNPTQHPXVFLKDVSHSALRDLLQFMYXG 394
           I  H+ +L   SP F+ MF    M   Q   + ++D  + ++R +++FMY G
Sbjct: 230 IKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMYTG 281


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +2

Query: 248 IATHKLVLSVCSPXFQEMFXMNPT---QHPXVFLKDVSHSALRDLLQFMYXGEVNVKXEE 418
           I  HK VL+  SP F  M     T   +   +++ D+ +  + +++ ++Y G  N    +
Sbjct: 212 IRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITD 271

Query: 419 LASFISTA 442
           +A+ +  A
Sbjct: 272 MATALLIA 279


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +2

Query: 248 IATHKLVLSVCSPXFQEMFXMNPT---QHPXVFLKDVSHSALRDLLQFMYXGEVNVKXEE 418
           I  HK VL+  SP F  M     T   +   +++ D+ +  + +++ ++Y G  N    +
Sbjct: 212 IRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITD 271

Query: 419 LASFISTA 442
           +A+ +  A
Sbjct: 272 MATALLIA 279


>AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical
           protein Y75B12B.4 protein.
          Length = 320

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +2

Query: 260 KLVLSVCSPXFQEMFXMNPTQHPXVFLK--DVSHSALRDLLQFMYXGEVNVKXEELASFI 433
           K VL+  S  FQ+MF  N  +     +K  DV+HS   DLL  +Y   + +    ++  +
Sbjct: 175 KQVLATSSQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLNVIYPTHMLINSSNVSHLL 234

Query: 434 STAXQLQV 457
             + +  V
Sbjct: 235 KLSDRFAV 242


>U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical
           protein C07D10.2a protein.
          Length = 390

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +2

Query: 248 IATHKLVLSVCSPXFQEMFXMNPT--QHPXVFLKDVSHSALRDLLQFMYXGEVNVKXEEL 421
           +  HK +L+  SP F  M   +    Q+    L+D+ +  ++ +L ++Y G         
Sbjct: 214 LKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRDIDYEVVQAILYYIYTGTCTNMGGNA 273

Query: 422 ASFISTAXQLQVKGL 466
              ++ A +  + GL
Sbjct: 274 LDILAAAERFALPGL 288


>U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical
           protein C07D10.2b protein.
          Length = 397

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +2

Query: 248 IATHKLVLSVCSPXFQEMFXMNPT--QHPXVFLKDVSHSALRDLLQFMYXGEVNVKXEEL 421
           +  HK +L+  SP F  M   +    Q+    L+D+ +  ++ +L ++Y G         
Sbjct: 221 LKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRDIDYEVVQAILYYIYTGTCTNMGGNA 280

Query: 422 ASFISTAXQLQVKGL 466
              ++ A +  + GL
Sbjct: 281 LDILAAAERFALPGL 295


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
 Frame = +2

Query: 248 IATHKLVLSVCSPXFQEMFXMN----PTQHPXVFLKDVSHSALRDLLQFMYXGEVNVKXE 415
           ++ HK++L+   P F+ MF ++      +   +   D+++  +  LL F Y GE+ +   
Sbjct: 62  LSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMNYETVDALLSFAYTGELRITTS 121

Query: 416 ELASFISTAXQLQV 457
            + S +  A   Q+
Sbjct: 122 NVQSIMLGANFFQM 135


>AC006830-2|AAK68611.2|  293|Caenorhabditis elegans Serpentine
           receptor, class sx protein40 protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 267 TNLCVAINPFGSQRYVYEIST 205
           +N+CV  N FG   Y+Y++ST
Sbjct: 154 SNICVLSNCFGDAYYLYKVST 174


>U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical
           protein T07F8.1 protein.
          Length = 822

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 392 GEVNVKXEELASFISTAXQLQVKGLTGNQ 478
           G    K EE+  +I  + ++  +GLTGNQ
Sbjct: 650 GPTKQKLEEVLDYIGCSQKINYQGLTGNQ 678


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,852,127
Number of Sequences: 27780
Number of extensions: 234050
Number of successful extensions: 532
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)