Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1004
(648 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 44 1e-04
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 44 1e-04
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 39 0.003
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 39 0.003
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 35 0.041
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 33 0.22
At2g47800.1 68415.m05966 glutathione-conjugate transporter (MRP4... 33 0.22
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 30 1.5
At4g04090.1 68417.m00578 speckle-type POZ protein-related contai... 28 6.1
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +2
Query: 254 THKLVLSVCSPXFQEMFX--MNPTQHPXVFLKDVSHSALRDLLQFMYXGEVNVK 409
+HK++LS+ S F +MF M+ + ++L DVS A + ++ FMY GE+N++
Sbjct: 366 SHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNME 419
Score = 33.1 bits (72), Expect = 0.16
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = +2
Query: 248 IATHKLVLSVCSPXFQEMFXMNPTQHPXVFLKDVSHSALRDLLQFMYXGEVNVKXEELAS 427
+ HK++L F + + + L+ VS+ L LLQ++Y G + ELA
Sbjct: 224 VPAHKVILQASGN-----FPLRSSDGDVIQLRGVSYPILHALLQYIYTGRTQILESELAP 278
Query: 428 FISTAXQLQVKGLTGNQNEESSTPSKPSR 514
+ + +V L Q EES K S+
Sbjct: 279 LRDLSSKFEVMSLV-RQCEESIDHFKLSK 306
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +2
Query: 254 THKLVLSVCSPXFQEMFX--MNPTQHPXVFLKDVSHSALRDLLQFMYXGEVNVK 409
+HK++LS+ S F +MF M+ + ++L DVS A + ++ FMY GE+N++
Sbjct: 366 SHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNME 419
Score = 33.1 bits (72), Expect = 0.16
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = +2
Query: 248 IATHKLVLSVCSPXFQEMFXMNPTQHPXVFLKDVSHSALRDLLQFMYXGEVNVKXEELAS 427
+ HK++L F + + + L+ VS+ L LLQ++Y G + ELA
Sbjct: 224 VPAHKVILQASGN-----FPLRSSDGDVIQLRGVSYPILHALLQYIYTGRTQILESELAP 278
Query: 428 FISTAXQLQVKGLTGNQNEESSTPSKPSR 514
+ + +V L Q EES K S+
Sbjct: 279 LRDLSSKFEVMSLV-RQCEESIDHFKLSK 306
>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +2
Query: 248 IATHKLVLSVCSPXFQEMFXMNPTQ---HPXVFLKDVSHSALRDLLQFMYXGEVNVKXEE 418
I THK VL+ S F+ M + + + L D+SH L+ LL+F+Y G + +
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96
Query: 419 LASFISTAXQLQVKGL 466
S A + + L
Sbjct: 97 YRSLYLAADKYDISYL 112
>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +2
Query: 248 IATHKLVLSVCSPXFQEMFXMNPTQ---HPXVFLKDVSHSALRDLLQFMYXGEVNVKXEE 418
I THK VL+ S F+ M + + + L D+SH L+ LL+F+Y G + +
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96
Query: 419 LASFISTAXQLQVKGL 466
S A + + L
Sbjct: 97 YRSLYLAADKYDISYL 112
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 35.1 bits (77), Expect = 0.041
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPXFQEMFX--MNPTQHPXVFLKDVSHSALRDLLQFMYXGEVNVKXEEL 421
I HK VL SP F+ M M + + + DVS+ ALR + ++Y E + +
Sbjct: 80 IPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQMA 139
Query: 422 ASFISTAXQLQVKGL 466
+ + + QVK L
Sbjct: 140 CDLLVMSEKYQVKHL 154
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 245 FIATHKLVLSVCSPXFQEMFXMN-PTQHPXVFLKDVSHSALRDLLQFMY 388
F+A HKLVL+ SP F+ F + V + D+ + LLQFMY
Sbjct: 209 FLA-HKLVLAARSPFFKSKFFSEFEANNTEVTINDLEPKVFKALLQFMY 256
>At2g47800.1 68415.m05966 glutathione-conjugate transporter (MRP4)
identical to AtMRP4 GI:2959767 from [Arabidopsis
thaliana]
Length = 1516
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Frame = +2
Query: 359 ALRDLLQFMYXGEVNVKXEELASFIS---TAXQL--QVKGLTGNQNEESSTPSKPS 511
A+ + F+ +++ E++ASF S TA L V+G+TG E+++P+KPS
Sbjct: 183 AVTGIFHFLSDAATSLRAEDVASFFSFPLTAFLLIASVRGITGLVTAETNSPTKPS 238
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 HKLVLSVCSPXFQEMFXMNPTQ-HPXVFLKDVSHSALRDLLQFMYXGEVNVKXEELAS 427
HKLVL+ S F+ MF + + V + D+ + LL FMY + E L +
Sbjct: 219 HKLVLAARSQFFRSMFYNTLAENNSDVVISDLEPKVFKALLHFMYKDSLPGDVEPLTA 276
>At4g04090.1 68417.m00578 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 192
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +2
Query: 248 IATHKLVLSVCSPXFQEMFXMN----PTQHPXVFLKDVSHSALRDLLQFMY 388
I+ HK +LS S F+EMF + ++ + L ++ H L + F Y
Sbjct: 38 ISAHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEAFVDFTY 88
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,060,880
Number of Sequences: 28952
Number of extensions: 216364
Number of successful extensions: 577
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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